FFCP PHASE1:Hg19::chr13:111364773..111364818,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25695 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000540629_5end | |||
|cluster_id=chr13:111364773..111364818,- | |||
|description=CAGE_peak_7_at_CARS2_5end | |||
|id=chr13:111364773..111364818,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.95e-17!57;UBERON:0005068!7.95e-17!57;UBERON:0006241!7.95e-17!57;UBERON:0007135!7.95e-17!57;UBERON:0001017!2.94e-15!82;UBERON:0005743!7.27e-15!86;UBERON:0002616!1.34e-14!59;UBERON:0000073!3.23e-14!94;UBERON:0001016!3.23e-14!94;UBERON:0000955!1.48e-13!69;UBERON:0006238!1.48e-13!69;UBERON:0007023!1.56e-13!115;UBERON:0003080!4.35e-11!42;UBERON:0002780!1.33e-10!41;UBERON:0001890!1.33e-10!41;UBERON:0006240!1.33e-10!41;UBERON:0002346!1.40e-10!90;UBERON:0003075!1.09e-09!86;UBERON:0007284!1.09e-09!86;UBERON:0002020!2.62e-08!34;UBERON:0003528!2.62e-08!34;UBERON:0001893!3.89e-08!34;UBERON:0002791!9.44e-08!33;UBERON:0001869!1.69e-07!32;UBERON:0003076!2.72e-07!15;UBERON:0003057!2.72e-07!15;UBERON:0003056!3.76e-07!61;UBERON:0000153!7.52e-07!129;UBERON:0007811!7.52e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.23e-10;53!UBERON:0002616;3.23e-10;53!UBERON:0002780;6.40e-10;41!UBERON:0001890;6.40e-10;41!UBERON:0002791;2.14e-08;32!UBERON:0001869;7.11e-08;32!UBERON:0003296;7.91e-08;4!UBERON:0010133;7.91e-08;4!UBERON:0000955;1.72e-07;68!UBERON:0001893;2.21e-07;34!UBERON:0003528;3.09e-07;34!UBERON:0002020;3.09e-07;34!UBERON:0002680;7.38e-07;9!UBERON:0001895;7.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.68e-17,56;UBERON:0005068,3.68e-17,56;UBERON:0006241,3.68e-17,56;UBERON:0007135,3.68e-17,56;UBERON:0000073,6.92e-17,53;UBERON:0002616,6.92e-17,53;UBERON:0001017,1.12e-12,81;UBERON:0000955,1.42e-12,68;UBERON:0006238,1.42e-12,68;UBERON:0001016,1.99e-12,89;UBERON:0002780,6.38e-12,41;UBERON:0001890,6.38e-12,41;UBERON:0003080,6.38e-12,41;UBERON:0006240,6.38e-12,41;UBERON:0003075,2.12e-11,82;UBERON:0007284,2.12e-11,82;UBERON:0002346,1.63e-10,86;UBERON:0007023,3.27e-10,114;UBERON:0003528,1.73e-09,34;UBERON:0002020,1.73e-09,34;UBERON:0001893,2.83e-09,34;UBERON:0002791,7.93e-09,32;UBERON:0001869,1.26e-08,32;UBERON:0010314,1.82e-08,132;UBERON:0010371,4.20e-08,104;UBERON:0003296,1.63e-07,4;UBERON:0010133,1.63e-07,4;UBERON:0003056,2.07e-07,61;UBERON:0002680,6.31e-07,9;UBERON:0001895,6.31e-07,9;UBERON:0010092,6.31e-07,9;UBERON:0000025,6.90e-07,192 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.704772020479856,0,0.893922188854576,0,0,0.631719873426831,0,0,1.39560233594486,0.218441372130172,0,0.37129905888014,0,0,0,0,0.487932798790507,0.492484232307152,1.02000345622126,0.940364164434263,0.572471974262113,0.684372125364421,1.12988375635323,0.458480434487708,0.57470412614962,0.550975469195755,0,1.53531759238885,0.619264493264304,1.83884244895785,0.6024118375565,0,0.0774672005803016,0,0.880801318004542,0,0.401088894940283,0.868043482863407,0.223915474239924,0.32389366601898,0,0.872389432677388,0.377875943688809,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0,0.709446689665756,1.03423704220986,0,1.35426486594342,0.752969358170419,0.272906150057846,0,0.612167784741805,0,0,0.659702600373432,0,0,0.580418477257168,0,0.622822248995575,0.502497330513487,0,0.868755378820466,1.21079900526674,0,0.632924774881769,0,0.425208599930087,0.419317291016752,0.673971786878971,0.750884464207532,0.16072558669708,0.285012743741249,0.79566670879636,0.365328307529268,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,0,0,1.14681968437569,0,0.560508562981536,0.263384084775077,1.180258620683,1.96505381374582,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0,0.768547918354051,0.520237390239513,0.164437904603676,0.552700035571697,0,0.741432815810302,0,1.04535523804977,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,1.30216690771284,0.950452044448374,0.301150238155546,0.127986611154418,0,1.18388626022008,0,0.201606743224732,0.802320587350522,1.59306844271079,2.43806866313962,1.34140171940727,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.43917392846563,1.5062593682237,0,0.370784442784429,0.324547393654683,0,0,0.953962497221368,2.85997455390064,0.371457501329565,0.39752481473341,0.860234595106124,0,0,0,0.825354125820202,1.25396979922086,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.794455084879313,0.286836620748814,0,1.68203280042692,1.06748995729705,0.49333509683432,0.622422070799533,0.67355336034844,0.490385709340376,0.454072282934794,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.352303495931295,0.971237666208789,1.12360645361799,0.61246251376468,0.737005903870608,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.500474079487857,0.554128230968366,0.438977620880838,0,0,0.226864366320042,0,0.640672166455702,0.635795703478686,0.600182192168805,0.206105058476878,0.257640540045629,0.744467425326359,0.506328996723799,0.292311015483596,0.757301322732344,0.0920498986422993,0.484938170456436,0,0.403008392910561,0.67824236924195,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.55146986366197,0.653638332277218,0.237270619111097,0.808987848960987,0.196221465125346,0.38474715694639,0,1.40241773803446,1.2347220339942,0,0,0,0,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,1.58040879591855,0.858486162094873,0.738651018262192,0.702012795417713,0.445893486866185,0,0,0,0,0,0.766765358330422,0,0.352193736052904,1.4512968087854,1.44119953416961,0.25248486685276,0.444485260045183,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0.112131084345361,0.87192013766656,0.22001485746285,0,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,1.3321108950805,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0.205476322550383,0.537182889719687,0.336255431980582,0.394061520403854,0.646882724578552,1.02674429023799,0.254094624222463,0,2.31986643833309,0.837581326671744,3.18969375826582,2.24702107184155,0,2.90090859405225,0.12269149171914,0,0.271265023699736,0.831883446123229,0,0.157702415033935,0.35142424497814,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,0.434418072340414,0.195801157462741,0.686286847621712,0.206768026122887,0.647142602455851,0.106727557803444,3.33440328590885,0,2.11673205330776,0.248107807818777,0,0.561320188866147,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0.200506470303285,0.276242966807689,0.68888668898764,0.182091168006717,0.131124414959424,0,0,3.13739907670742,1.46139224653261,0.211103257785751,1.13733384070897,0.510281115829547,0,0,0.270946437543853,0,0.254876273045038,0,0,1.31555925987561,0.261435451024901,0.512900250232778,0.328014645699706,0,0.309123034943167,1.64825036673018,0.907604499126468,1.14853107599234,0.650060246036521,0,0.193341436584244,0.308097234229289,0.921022048356777,0.275673144969061,0.322260734604821,0.725083469571143,0.596586391912706,0.712256285173899,0.165284915360978,0.576570202095319,0.382838137483752,0.4046311234222,0,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0.286249773483982,0.744316738719335,0.949138274156178,0,0.511795582622668,0,0.636406495851874,0,0,0.274537029736055,0.471249609382746,0,0,0.842516912477962,0,1.21856744815642,1.05650146756755,0.682499557039929,0.282810863907425,0,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.294747123039363,0,0.709522128141196,0,0.329294892959902,0.379473173765715,0.349934720244983,0.192444225451024,0.670302275535787,1.08890984861323,0.470719003883896,0.43050537267123,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0.320472213382419,0,0.490080431962063,0,0,0.426851060090485,0.159426272728822,0.59873811429845,0.191505370132367,0.211673582723883,0.324621940274555,1.12318871245384,0.912938716132769,0.47003968731907,0,0.338583555603207,0.321176150207399,1.21079824314629,0,0,0,0.447352215784832,0.166849141711909,0.976940477010201,0.556812347790485,0,0,0,0,0,0.146508179271894,1.33496573924465,0.557216921387392,0,0,0.296964680832639,0.614321404198464,0,1.40669416410513,0,0.824019371133798,1.47787785689595,1.19548792950642,0.276283915531148,0,0.20453736500431,0.246169610922139,0,0,0.179021174675609,2.55786185113436,0.394573622547734,0,0,0.969332746095218,0.371072392647405,3.99227596002388,0,0,1.44999915086959,0,0.508507300585533,0.709163045303809,1.03423011972439,0.583209226766509,0,0.885741385813839,1.08536794762867,1.52581736317083,1.43753037910592,2.36438095162838,0.438770794307945,0.21787692703798,0.41827123283581,0.384751292518985,0.569710279235006,0,0.179515288819544,0.325942115766024,0.31900115973192,0.732780747214898,0.533034776018635,0,0.627921025580099,0.332423363800313,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0.158936578980379,0.210998064528027,0,0.565412285735763,0.216388639742091,1.99052386215701,0.265372693510018,0.611030144933625,0.593042257361244,0.123563938946503,0.313265848516366,0.606610196826093,1.60515529459758,0.468528891450678,0.364909578431332,0.391329237864179,0,0.789168805698781,0,1.83643656978294,0.063186579628488,0.300646838828985,0.414752765588989,0,0,0.313932918407225,0,0,0,0.520679215005393,0,0,0.698906672968121,0.343972064943233,0.19351266257817,0.438535902517113,0.328461828212837,0.484945082442097,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.759729551470544,0.586654148204409,0.0801588202515337,0,0.39961921916426,0.288180834308212,0.229073192331831,1.20116498503375,0.288109595976299,0,0.942776138467182,0.271808412147228,0.313808538937,0.203996435272644,0.288950589901519,1.80126086612937,0.684526894459965,0,0,0.525774708558629,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0.236349546921671,0.0824158583811665,0.404421263125109,0,0.592713324460491,0.795229689809303,1.77064427945048,0.643012593860077,0.412618309791701,0.83088067605837,0,0,0.728994679896296,0,0.315222829196793,0.419636705079985,0,0,0.383830394638891,0,0.662091970365432,1.017074150619,0,0,0.326587360109409,2.39460383124975,0.492555124496034,0.681552087141687,0.339936274560377,0.146552233678082,0,1.80996138906171,0.66116300871345,0.171086837884329,0,0.640724475406168,0.157204305099666,1.65695622138878,0.496166021811951,0,0.243585196761792,0.638341257770182,0.544017803369474,0,0.612691153526923,0.327872630709804,0.471162288750703,0,0.976210119215705,1.6274820991845,0.573409195690071,1.10929051536852,0.931446044120752,0.138348634936231,0.249960815924213,0.151649117541648,0,0.470531639396343,0.468334905806882,0.724605143054126,0.597019211547496,0.233713309847224,0,0,0,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0,0,0,0,0.322231671127465,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0,0,0,1.15761237161917,0.244736704506468,0.358177682162975,0.308801447160972,0,1.06013487567529,0.578742114812744,0.506827321959218,0.512483037175893,0.690860683462397,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0.491545817507439,0.422624246717254,0,0.320075189082423,1.37771983728653,0,0.552317850755522,0,0,1.15104934173287,1.1860729253635,0.471797825567689,0.655257829152084,0.678930119816101,0.850299680406731,0.991486114072017,0,0.636008701306837,0.630893960010027,1.60114149657094,1.41070377476274,0.3062454773532,0.899209151350433,0,0.957803154342908,1.64093091392604,4.53729053199093,1.03735878696327,0.807378228159255,0,0.392590874004102,0.235939446695481,0,0.115525666150338,0.381382095467167,0,0,0.376051641746286,0,1.56302802246618,0.261906694481422,0,0.295712172434091,1.08060135389431,0,1.2401207790071,1.01465296310251,1.64092442705466,0.548257766857182,0.496211178389294,0.527613733078862,0.127762427639595,1.07140367175657,1.3451348888753,1.21393120847326,2.73194629621557,0.79832133146375,0.345701962667338,0.342976018874837,1.22345519358297,0.657727735628491,0.354581522651905,0.222462803784138,0.235479278551542,1.09980912941201,0.560544326627578,4.56579360254748,0.647782773655864,0.47775168788705,0.714765441766563,0.632054446930906,0.464965701472501,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0.860454717640555,0.118332000730565,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0,0.392600934460972,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0.701818390386317,1.39265542612958,0.83244063544298,0.45178432815584,0.769583617218004,0.301925687133347,0.385870790539723,0.437119121007915,0.470317296361523,1.96118657403124,0,1.96308467114945,0.891139200981258,0.8453114551668,0,0.281951753939561,0.257831551894309,0,0.178553938605658,0,0,0,0,1.72007499781742,0.631086248772738,0.883889372481891,5.67255897442491,0.5290268405154,0,0,0,0.126166424835079,0.546327859818478,0.253397002022874,0.203977659483963,0,0.36757959813938,0,3.10692662694782,2.94760543171796,0.829169439458779,0.930896962757057,0.213233981900981,0.476128862927481,0.775066918032073,1.92431614317159,0.672791175483681,0.381882949668989,1.21270313374932,0,0.684466602170562,0.26940821205835,0.143444410785353,0.665320713092027,0.407016343054873,0.106727345877715,0,0.269475606319761,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p7@CARS2 | |||
}} |
Latest revision as of 13:22, 16 September 2015
Short description: | p7@CARS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CARS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000540629_5end |
EntrezGene: | CARS2 |
HGNC: | 25695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.68e-17 | 56 |
neural rod | 3.68e-17 | 56 |
future spinal cord | 3.68e-17 | 56 |
neural keel | 3.68e-17 | 56 |
regional part of nervous system | 6.92e-17 | 53 |
regional part of brain | 6.92e-17 | 53 |
central nervous system | 1.12e-12 | 81 |
brain | 1.42e-12 | 68 |
future brain | 1.42e-12 | 68 |
nervous system | 1.99e-12 | 89 |
regional part of forebrain | 6.38e-12 | 41 |
forebrain | 6.38e-12 | 41 |
anterior neural tube | 6.38e-12 | 41 |
future forebrain | 6.38e-12 | 41 |
neural plate | 2.12e-11 | 82 |
presumptive neural plate | 2.12e-11 | 82 |
neurectoderm | 1.63e-10 | 86 |
adult organism | 3.27e-10 | 114 |
brain grey matter | 1.73e-09 | 34 |
gray matter | 1.73e-09 | 34 |
telencephalon | 2.83e-09 | 34 |
regional part of telencephalon | 7.93e-09 | 32 |
cerebral hemisphere | 1.26e-08 | 32 |
structure with developmental contribution from neural crest | 1.82e-08 | 132 |
ecto-epithelium | 4.20e-08 | 104 |
gland of diencephalon | 1.63e-07 | 4 |
neuroendocrine gland | 1.63e-07 | 4 |
pre-chordal neural plate | 2.07e-07 | 61 |
regional part of metencephalon | 6.31e-07 | 9 |
metencephalon | 6.31e-07 | 9 |
future metencephalon | 6.31e-07 | 9 |
tube | 6.90e-07 | 192 |