FFCP PHASE1:Hg19::chr14:22918692..22918707,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-373bp_to_uc001wdx.3_5end | |||
|cluster_id=chr14:22918692..22918707,+ | |||
|coexpression_cluster_id=C2286 | |||
|description=CAGE_peak_2_at_uc001wdx.3_5end | |||
|id=chr14:22918692..22918707,+ | |||
|ontology_enrichment_celltype=CL:0000625!3.50e-14!11;CL:0000791!6.49e-10!18;CL:0000789!6.49e-10!18;CL:0002420!6.49e-10!18;CL:0002419!6.49e-10!18;CL:0000790!6.49e-10!18;CL:0000037!1.57e-08!172;CL:0000566!1.57e-08!172;CL:0000738!5.14e-08!140;CL:0000623!8.56e-08!3;CL:0000825!8.56e-08!3;CL:0000767!1.28e-07!3;CL:0000988!1.62e-07!182;CL:0000842!2.07e-07!3;CL:0000838!3.35e-07!52;CL:0000542!5.50e-07!53;CL:0000051!5.50e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.78e-28;11!CL:0000791;3.31e-21;18!CL:0000789;3.31e-21;18!CL:0002419;3.31e-21;18!CL:0000623;2.35e-17;3!CL:0000767;6.68e-17;3!CL:0000226;2.03e-16;3!CL:0000842;2.03e-16;3!CL:0000084;7.53e-15;25!CL:0002393;2.99e-08;6!CL:0002397;2.99e-08;6!CL:0002605;1.49e-07;3!CL:0002127;5.58e-07;1!CL:0000911;5.58e-07;1!CL:0000814;5.58e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.17e-28,11;CL:0000791,3.16e-21,18;CL:0000789,3.16e-21,18;CL:0002420,3.16e-21,18;CL:0002419,3.16e-21,18;CL:0000790,3.16e-21,18;CL:0000623,2.35e-17,3;CL:0000825,2.35e-17,3;CL:0000767,6.51e-17,3;CL:0000226,2.19e-16,3;CL:0000842,2.19e-16,3;CL:0000084,7.27e-15,25;CL:0000827,7.27e-15,25;CL:0000037,1.59e-12,168;CL:0000738,5.00e-12,136;CL:0000838,6.93e-12,52;CL:0000988,1.25e-11,177;CL:0000542,1.29e-11,53;CL:0000051,1.29e-11,53;CL:0002087,1.99e-10,115;CL:0002032,1.45e-09,161;CL:0000837,1.45e-09,161;CL:0002605,1.73e-07,3;CL:0002127,5.58e-07,1;CL:0000914,5.58e-07,1;CL:0000911,5.58e-07,1;CL:0000814,5.58e-07,1;CL:0002042,5.58e-07,1;CL:0002039,5.58e-07,1;CL:0002040,5.58e-07,1;CL:0002041,5.58e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.31e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.57e-19!15;UBERON:0000179!4.57e-19!15;UBERON:0000463!4.57e-19!15;UBERON:0007023!8.65e-08!115;UBERON:0004177!7.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.61e-48;15!UBERON:0000179;6.61e-48;15!UBERON:0000463;6.61e-48;15!UBERON:0002390;1.20e-22;32!UBERON:0002193;2.19e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.97e-48,15;UBERON:0000179,5.97e-48,15;UBERON:0000463,5.97e-48,15;UBERON:0002390,1.87e-11,98;UBERON:0003061,1.87e-11,98;UBERON:0002193,4.54e-10,108 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,3.72106783270374,1.09499540058307,0.125542639594803,0,0,0,7.47392126012918,15.3531759238885,6.50227717927519,0,0,0,0,0,0,3.32397245119126,4.8130667392834,5.64228263861215,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,4.14135038621326,5.20866763085135,1.90090408889675,1.35517607169996,1.15187950038977,4.99722906209383,1.65744076430812,1.64225599384209,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.6343094939999,28.7664909894814,28.6784674563158,31.9574160336573,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,6.47142602455851,7.04401881502733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,6.5968189200182,7.64637207142375,5.69647187174163,4.2881719582402,5.75907182320672,5.83625980073446,4.32025149790492,5.55187623405989,0,0,0,0,0.28853842595289,0,0,0,0.383010740264733,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4270111702054,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,16.5294042139594,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,9.2764548446753,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0.306345576763462,1.31149052283922,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.67767649223376,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.35636710655613,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p2@uc001wdx.3 | |||
}} |
Latest revision as of 19:11, 24 July 2015
Short description: | p2@uc001wdx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001wdx.3_5end |
Coexpression cluster: | C2286_leukemia_Natural_chronic_acute_NK_Astrocyte_blood |
Association with transcript: | -373bp_to_uc001wdx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.17e-28 | 11 |
mature alpha-beta T cell | 3.16e-21 | 18 |
alpha-beta T cell | 3.16e-21 | 18 |
immature T cell | 3.16e-21 | 18 |
mature T cell | 3.16e-21 | 18 |
immature alpha-beta T cell | 3.16e-21 | 18 |
natural killer cell | 2.35e-17 | 3 |
pro-NK cell | 2.35e-17 | 3 |
basophil | 6.51e-17 | 3 |
single nucleate cell | 2.19e-16 | 3 |
mononuclear cell | 2.19e-16 | 3 |
T cell | 7.27e-15 | 25 |
pro-T cell | 7.27e-15 | 25 |
hematopoietic stem cell | 1.59e-12 | 168 |
leukocyte | 5.00e-12 | 136 |
lymphoid lineage restricted progenitor cell | 6.93e-12 | 52 |
hematopoietic cell | 1.25e-11 | 177 |
lymphocyte | 1.29e-11 | 53 |
common lymphoid progenitor | 1.29e-11 | 53 |
nongranular leukocyte | 1.99e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.45e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-09 | 161 |
astrocyte of the cerebral cortex | 1.73e-07 | 3 |
innate effector T cell | 5.58e-07 | 1 |
immature NK T cell | 5.58e-07 | 1 |
effector T cell | 5.58e-07 | 1 |
mature NK T cell | 5.58e-07 | 1 |
immature NK T cell stage IV | 5.58e-07 | 1 |
immature NK T cell stage I | 5.58e-07 | 1 |
immature NK T cell stage II | 5.58e-07 | 1 |
immature NK T cell stage III | 5.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.97e-48 | 15 |
haemolymphatic fluid | 5.97e-48 | 15 |
organism substance | 5.97e-48 | 15 |
hematopoietic system | 1.87e-11 | 98 |
blood island | 1.87e-11 | 98 |
hemolymphoid system | 4.54e-10 | 108 |