FFCP PHASE1:Hg19::chr14:55493833..55493842,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19392 | |||
|TSSclassifier=strong | |||
|UniProt=Q5H9R6,Q8WXH5 | |||
|association_with_transcript=-1bp_to_NM_080867,NM_199421,uc001xbo.2,uc001xbp.2_5end | |||
|cluster_id=chr14:55493833..55493842,+ | |||
|description=CAGE_peak_6_at_SOCS4_5end | |||
|id=chr14:55493833..55493842,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.12e-14;5!CL:0002032;4.90e-09;1!CL:0002553;4.90e-09;1!CL:0000557;4.90e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.60e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.90e-09;1!UBERON:0009117;1.38e-07;10!UBERON:0005564;1.38e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.12e-12;10!DOID:3095;2.53e-12;22!DOID:2994;2.53e-12;22!DOID:169;2.54e-12;6!DOID:3347;4.90e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.45e-12,10;DOID:169,2.60e-12,6;DOID:3095,3.81e-12,22;DOID:2994,3.81e-12,22;DOID:3347,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.34e-11!94;UBERON:0001016!2.34e-11!94;UBERON:0001017!1.55e-10!82;UBERON:0005743!2.98e-10!86;UBERON:0000955!1.78e-08!69;UBERON:0006238!1.78e-08!69;UBERON:0001049!2.44e-08!57;UBERON:0005068!2.44e-08!57;UBERON:0006241!2.44e-08!57;UBERON:0007135!2.44e-08!57;UBERON:0002020!7.42e-08!34;UBERON:0003528!7.42e-08!34;UBERON:0007023!8.69e-08!115;UBERON:0001893!2.23e-07!34;UBERON:0000924!2.31e-07!173;UBERON:0006601!2.31e-07!173;UBERON:0002791!3.13e-07!33;UBERON:0002616!3.18e-07!59;UBERON:0002346!3.49e-07!90;UBERON:0000956!3.61e-07!25;UBERON:0000203!3.61e-07!25;UBERON:0000153!3.69e-07!129;UBERON:0007811!3.69e-07!129;UBERON:0000033!4.25e-07!123;UBERON:0001869!5.90e-07!32;UBERON:0002619!5.91e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.12e-14;5!UBERON:0002410;1.12e-14;5!UBERON:0001831;4.90e-09;1!UBERON:0001567;4.90e-09;1!UBERON:0000010;2.23e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.15e-14,5;UBERON:0002410,1.15e-14,5;UBERON:0001831,7.85e-09,1;UBERON:0001567,7.85e-09,1;UBERON:0008801,7.85e-09,1;UBERON:0000010,2.26e-08,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0,0.229240217243854,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0.205601498999509,0.167186495390678,0.651844533267181,1.4203434172042,0,0.111410456885174,0,0.664601683750863,0,0,0.260118695119756,0.493313713811028,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0,1.03088233644789,0,0.637130828648193,0,0,0.301150238155546,0.511946444617674,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.877955241761676,0,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0,0.609868530647977,0.265059536642971,0.464775771478074,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.317489471460845,0,0,0,0.514137463516618,0.300343057843917,0,0.224262168690721,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0.197030760201927,0,0.256686072559497,0.508189248444927,1.30139853857622,0,1.17261385734044,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.553107505625109,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.438519753291869,0,0.256450125116389,0,0,0.618246069886334,0.183138929636687,0.41254749960294,0,0,0,0.096670718292122,0.770243085573222,0.460511024178389,0.275673144969061,0.107420244868274,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.711418433484141,0,0,0.383010740264733,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0.296964680832639,0,1.9882952955326,0.140669416410513,0.667852230137435,0,5.70038601945582,0,0.276283915531148,0,0.409074730008619,0.369254416383208,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0,0,0.227586896570999,0,0.236387681767936,0,1.16641845353302,1.38899995946634,0,0.241192877250816,1.52581736317083,0.331737779793674,0.295547618953547,0.219385397153973,0,0.139423744278603,0.538651809526579,0,0.46112780877612,0,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0.649165919226273,0,0,0,0.296521128680622,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0.729819156862664,0.19566461893209,0,0,0,1.83643656978294,0.31593289814244,0.60129367765797,0.207376382794494,0.664653872707185,0,0,0,0.284609546029793,0.554698692052555,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0,0.387956065953678,0.353024506766001,0.225980740780532,0,0,0.50648636764703,0.586654148204409,0,0.213452994739353,0,0,0.229073192331831,0.514784993585894,0.576219191952599,0.124252535565433,0.471388069233591,0.271808412147228,0.209205692624666,0,0.288950589901519,0,0.136905378891993,1.27746588066972,0,0.262887354279314,0,0,0.717873024576814,0,0.429226048136571,0.446342914883745,0.268733889946905,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0,0.254019996197353,0.795229689809303,0.136203406111576,0.321506296930038,0,0,0.899895566206002,0,0.546746009922222,0,0.0788057072991982,0.209818352539992,0.31680100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| |||
|short_description=p6@SOCS4 | |||
}} |
Latest revision as of 15:18, 24 September 2015
Short description: | p6@SOCS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SOCS4_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_080867, NM_199421, uc001xbo.2, uc001xbp.2_5end |
EntrezGene: | SOCS4 |
HGNC: | 19392 |
UniProt: | Q5H9R6Q8WXH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.60e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.15e-14 | 5 |
autonomic nervous system | 1.15e-14 | 5 |
parotid gland | 7.85e-09 | 1 |
cheek | 7.85e-09 | 1 |
parotid gland primordium | 7.85e-09 | 1 |
peripheral nervous system | 2.26e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.45e-12 | 10 |
neuroendocrine tumor | 2.60e-12 | 6 |
germ cell and embryonal cancer | 3.81e-12 | 22 |
germ cell cancer | 3.81e-12 | 22 |
osteosarcoma | 4.19e-09 | 1 |