FFCP PHASE1:Hg19::chr15:79310355..79310371,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9875 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_uc010unh.1_5end | |||
|cluster_id=chr15:79310355..79310371,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_11_at_RASGRF1_5end | |||
|id=chr15:79310355..79310371,- | |||
|ontology_enrichment_celltype=CL:0000990!6.00e-23!8;CL:0000945!1.31e-22!24;CL:0000826!1.31e-22!24;CL:0000453!1.91e-19!5;CL:0000451!1.11e-18!10;CL:0000236!2.04e-14!14;CL:0000542!2.67e-11!53;CL:0000051!2.67e-11!53;CL:0000838!1.82e-09!52;CL:0000840!5.64e-09!5;CL:0001029!5.64e-09!5;CL:0000738!2.25e-08!140;CL:0000819!6.88e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.72e-40;5!CL:0000990;9.01e-23;8!CL:0000451;8.93e-19;10!CL:0000945;3.89e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.91e-40,5;CL:0000990,9.35e-23,8;CL:0000451,9.20e-19,10;CL:0000945,3.68e-15,24;CL:0000826,3.68e-15,24;CL:0000542,1.39e-10,53;CL:0000051,1.39e-10,53;CL:0000738,4.17e-10,136;CL:0002032,1.68e-08,161;CL:0000837,1.68e-08,161;CL:0000037,3.90e-08,168;CL:0000988,1.05e-07,177;CL:0000838,3.39e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.13e-23;1 | |||
|ontology_enrichment_disease=DOID:630!1.86e-07!1;DOID:0050177!1.86e-07!1;DOID:0050427!1.86e-07!1;DOID:12603!2.37e-07!1;DOID:0060073!6.88e-07!1;DOID:8675!6.88e-07!1;DOID:2355!9.18e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.62e-23;1!DOID:0050177;2.62e-23;1!DOID:0050427;2.62e-23;1!DOID:12603;5.13e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.62e-23,1;DOID:0050177,2.62e-23,1;DOID:0050427,2.62e-23,1;DOID:12603,6.40e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.83e-13!7;UBERON:0002106!1.44e-08!3;UBERON:0004854!1.44e-08!3;UBERON:0009034!1.44e-08!3;UBERON:0002095!1.44e-08!3;UBERON:0004782!1.44e-08!3;UBERON:0003281!1.44e-08!3;UBERON:0009664!1.44e-08!3;UBERON:0002296!1.44e-08!3;UBERON:0005602!1.44e-08!3;UBERON:0001179!1.44e-08!3;UBERON:0006293!1.44e-08!3;UBERON:0001154!2.23e-07!1;UBERON:0001153!2.23e-07!1;UBERON:0002372!2.67e-07!1;UBERON:0001961!2.67e-07!1;UBERON:0001744!2.67e-07!1;UBERON:0001735!2.67e-07!1;UBERON:0000029!4.06e-07!1;UBERON:0002370!8.45e-07!4;UBERON:0005058!8.45e-07!4;UBERON:0009113!8.45e-07!4;UBERON:0003295!8.45e-07!4;UBERON:0005562!8.45e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.13e-23;1!UBERON:0001153;5.13e-23;1!UBERON:0009854;5.13e-23;1!UBERON:0009856;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,1.30062222588003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,4.30796819113743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,12.1792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28692679446655,2.92302648689399,8.34183510704806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.558672428662721,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.603821380773079,3.8468219076388 | |||
|short_description=p11@RASGRF1 | |||
}} |
Latest revision as of 07:56, 19 September 2015
Short description: | p11@RASGRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RASGRF1_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -41bp_to_uc010unh.1_5end |
EntrezGene: | RASGRF1 |
HGNC: | 9875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.91e-40 | 5 |
conventional dendritic cell | 9.35e-23 | 8 |
dendritic cell | 9.20e-19 | 10 |
lymphocyte of B lineage | 3.68e-15 | 24 |
pro-B cell | 3.68e-15 | 24 |
lymphocyte | 1.39e-10 | 53 |
common lymphoid progenitor | 1.39e-10 | 53 |
leukocyte | 4.17e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-08 | 161 |
hematopoietic stem cell | 3.90e-08 | 168 |
hematopoietic cell | 1.05e-07 | 177 |
lymphoid lineage restricted progenitor cell | 3.39e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.62e-23 | 1 |
monogenic disease | 2.62e-23 | 1 |
xeroderma pigmentosum | 2.62e-23 | 1 |
acute leukemia | 6.40e-23 | 1 |