FFCP PHASE1:Hg19::chr16:2141529..2141537,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:2141529..2141537,+ | |||
|description=CAGE_peak_at_chr16:2141529..2141537,+ | |||
|id=chr16:2141529..2141537,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;1.80e-23;7!CL:1000612;1.80e-23;7!CL:0000650;5.69e-21;2!CL:1000500;5.69e-21;2!CL:1000618;5.69e-21;2!CL:1001318;5.69e-21;2!CL:0002173;5.69e-21;2!CL:0002681;3.59e-14;12!CL:0002584;3.59e-14;12!CL:1000449;1.49e-11;15!CL:0000669;3.42e-11;4!CL:1000497;2.58e-10;17!CL:0002518;2.58e-10;17!CL:0002188;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,1.80e-23,7;CL:1000612,1.80e-23,7;CL:0000650,6.96e-21,2;CL:1000500,6.96e-21,2;CL:1000618,6.96e-21,2;CL:1001318,6.96e-21,2;CL:0002173,6.96e-21,2;CL:0002681,3.59e-14,12;CL:0002584,3.59e-14,12;CL:1000449,1.50e-11,15;CL:0000669,3.79e-11,4;CL:1000497,2.58e-10,17;CL:0002518,2.58e-10,17;CL:0002188,2.97e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.27e-09!25;DOID:3493!3.82e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.81e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.81e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!2.02e-10!11;UBERON:0005409!4.78e-09!35;UBERON:0001155!6.20e-09!9;UBERON:0000160!4.24e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.80e-23;7!UBERON:0001229;1.80e-23;7!UBERON:0003567;5.69e-21;2!UBERON:0003838;5.69e-21;2!UBERON:0003586;5.69e-21;2!UBERON:0005169;5.69e-21;2!UBERON:0002321;5.69e-21;2!UBERON:0005215;5.69e-21;2!UBERON:0002303;5.69e-21;2!UBERON:0002319;5.69e-21;2!UBERON:0001225;3.59e-14;12!UBERON:0008987;3.59e-14;12!UBERON:0001851;1.49e-11;15!UBERON:0006555;1.49e-11;15!UBERON:0000353;1.49e-11;15!UBERON:0004819;1.49e-11;15!UBERON:0001285;1.49e-11;15!UBERON:0007684;1.49e-11;15!UBERON:0003891;3.42e-11;4!UBERON:0002113;1.36e-07;24!UBERON:0011143;1.36e-07;24!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.80e-23,7;UBERON:0000074,1.80e-23,7;UBERON:0001229,1.80e-23,7;UBERON:0001230,1.80e-23,7;UBERON:0003220,1.80e-23,7;UBERON:0005749,1.80e-23,7;UBERON:0004199,1.80e-23,7;UBERON:0004209,1.80e-23,7;UBERON:0004198,1.80e-23,7;UBERON:0003567,6.96e-21,2;UBERON:0003838,6.96e-21,2;UBERON:0003586,6.96e-21,2;UBERON:0005169,6.96e-21,2;UBERON:0002321,6.96e-21,2;UBERON:0005215,6.96e-21,2;UBERON:0002303,6.96e-21,2;UBERON:0002319,6.96e-21,2;UBERON:0005103,1.10e-20,8;UBERON:0000083,1.10e-20,8;UBERON:0009201,1.10e-20,8;UBERON:0006553,1.10e-20,8;UBERON:0003074,1.10e-20,8;UBERON:0003060,1.10e-20,8;UBERON:0000080,1.61e-18,9;UBERON:0002120,1.61e-18,9;UBERON:0004875,1.61e-18,9;UBERON:0005721,1.61e-18,9;UBERON:0005754,1.61e-18,9;UBERON:0007297,1.61e-18,9;UBERON:0004876,2.33e-15,11;UBERON:0001225,3.59e-14,12;UBERON:0008987,3.59e-14,12;UBERON:0003887,3.59e-14,12;UBERON:0001851,1.50e-11,15;UBERON:0004211,1.50e-11,15;UBERON:0009773,1.50e-11,15;UBERON:0000353,1.50e-11,15;UBERON:0001231,1.50e-11,15;UBERON:0001285,1.50e-11,15;UBERON:0007684,1.50e-11,15;UBERON:0004208,1.50e-11,15;UBERON:0003891,3.79e-11,4;UBERON:0006555,6.78e-11,16;UBERON:0004819,6.78e-11,16;UBERON:0000058,2.46e-09,19;UBERON:0002113,4.41e-07,26;UBERON:0003918,4.41e-07,26;UBERON:0011143,4.41e-07,26;UBERON:0005095,4.41e-07,26;UBERON:0007687,4.41e-07,26;UBERON:0001871,6.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.71623345421307,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0.576361668616424,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.447421727191169,0.294450700845729,2.19452264968085,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,3.29222107453066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:2141529..2141537,+ | |||
}} |
Latest revision as of 07:05, 25 July 2015
Short description: | p@chr16:2141529..2141537, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2141529..2141537, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.80e-23 | 7 |
kidney corpuscule cell | 1.80e-23 | 7 |
mesangial cell | 6.96e-21 | 2 |
kidney interstitial cell | 6.96e-21 | 2 |
juxtaglomerular complex cell | 6.96e-21 | 2 |
renal interstitial pericyte | 6.96e-21 | 2 |
extraglomerular mesangial cell | 6.96e-21 | 2 |
kidney cortical cell | 3.59e-14 | 12 |
renal cortical epithelial cell | 3.59e-14 | 12 |
epithelial cell of nephron | 1.50e-11 | 15 |
pericyte cell | 3.79e-11 | 4 |
kidney cell | 2.58e-10 | 17 |
kidney epithelial cell | 2.58e-10 | 17 |
glomerular endothelial cell | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.81e-21 | 2 |