FFCP PHASE1:Hg19::chr16:55522536..55522599,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7166 | |||
|TSSclassifier=strong | |||
|UniProt=Q2EF79 | |||
|association_with_transcript=21bp_to_DQ385623_5end | |||
|cluster_id=chr16:55522536..55522599,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_4_at_MMP2_5end | |||
|id=chr16:55522536..55522599,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.62e-41!180;CL:0000057!1.43e-19!75;CL:0000680!9.26e-18!57;CL:0000056!9.26e-18!57;CL:0000355!9.26e-18!57;CL:0000187!2.26e-16!54;CL:0000183!5.96e-16!59;CL:0000393!1.00e-14!60;CL:0000211!1.00e-14!60;CL:0000192!4.02e-14!42;CL:0000514!4.02e-14!42;CL:0000222!5.97e-11!119;CL:0000359!6.23e-11!32;CL:0002371!1.98e-09!591;CL:0002334!1.02e-08!12;CL:0000144!2.65e-08!625;CL:0000048!5.38e-08!430;CL:0002620!1.23e-07!23;CL:0000723!3.46e-07!436;CL:0000220!8.17e-07!246;CL:0000499!9.79e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.89e-11;12!CL:0000359;1.14e-10;32!CL:0000192;7.57e-10;43!CL:0000057;9.58e-09;73!CL:0002620;1.23e-08;23!CL:0000048;1.25e-08;58!CL:0000723;2.26e-08;61!CL:0000134;2.39e-08;55!CL:0000499;2.89e-08;28!CL:0002320;4.15e-08;188!CL:0002539;1.09e-07;10!CL:0000187;8.77e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.22e-22,76;CL:0000048,2.06e-16,427;CL:0000723,1.45e-15,433;CL:0000680,1.63e-14,58;CL:0000056,1.63e-14,58;CL:0000355,1.63e-14,58;CL:0000034,1.77e-14,441;CL:0000192,3.16e-13,43;CL:0000514,3.16e-13,43;CL:0000187,7.32e-13,55;CL:0002334,1.58e-11,12;CL:0000393,3.28e-11,61;CL:0000211,3.28e-11,61;CL:0000359,1.01e-10,32;CL:0002620,8.96e-09,23;CL:0000499,2.57e-08,28;CL:0002539,9.53e-08,10;CL:0002320,3.15e-07,361;CL:0000134,6.73e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;7.57e-10;43!CL:0000355;4.62e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!7.61e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.44e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.22e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.03e-17!82;UBERON:0000914!1.20e-17!83;UBERON:0002329!1.20e-17!83;UBERON:0003077!1.20e-17!83;UBERON:0003059!1.20e-17!83;UBERON:0007282!1.20e-17!83;UBERON:0009618!1.20e-17!83;UBERON:0007285!1.20e-17!83;UBERON:0004290!1.85e-17!70;UBERON:0002385!7.58e-17!63;UBERON:0001015!7.58e-17!63;UBERON:0000383!7.58e-17!63;UBERON:0001134!8.32e-17!61;UBERON:0002036!8.32e-17!61;UBERON:0003082!8.32e-17!61;UBERON:0004872!1.96e-16!84;UBERON:0001637!4.53e-13!42;UBERON:0003509!4.53e-13!42;UBERON:0004572!4.53e-13!42;UBERON:0005256!1.52e-12!143;UBERON:0001981!1.04e-11!60;UBERON:0007500!1.04e-11!60;UBERON:0004537!1.04e-11!60;UBERON:0006965!1.04e-11!60;UBERON:0002049!3.64e-11!79;UBERON:0007798!3.64e-11!79;UBERON:0004573!6.24e-11!33;UBERON:0004571!6.24e-11!33;UBERON:0001009!3.83e-10!113;UBERON:0000490!4.47e-10!138;UBERON:0000055!4.98e-10!69;UBERON:0004535!1.09e-09!110;UBERON:0003914!2.15e-09!118;UBERON:0002100!3.50e-09!216;UBERON:0000947!1.63e-08!21;UBERON:0010191!1.63e-08!21;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0001135!1.64e-07!15;UBERON:0000468!2.14e-07!659;UBERON:0000475!2.65e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.33e-12;33!UBERON:0004571;1.33e-12;33!UBERON:0001637;4.03e-10;42!UBERON:0003509;4.03e-10;42!UBERON:0004572;4.03e-10;42!UBERON:0000947;4.55e-10;21!UBERON:0010191;4.55e-10;21!UBERON:0002384;1.40e-08;198!UBERON:0004457;9.34e-08;9!UBERON:0000042;9.34e-08;9!UBERON:0004237;1.09e-07;10!UBERON:0004695;1.09e-07;10!UBERON:0002111;1.09e-07;10!UBERON:0004178;1.09e-07;10!UBERON:0001135;2.18e-07;15!UBERON:0002199;5.64e-07;46!UBERON:0002416;5.64e-07;46!UBERON:0003688;6.38e-07;6!UBERON:0002358;6.38e-07;6!UBERON:0003684;6.38e-07;6!UBERON:0001178;6.38e-07;6!UBERON:0002385;7.94e-07;31!UBERON:0001015;7.94e-07;31!UBERON:0000383;7.94e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.97e-14,73;UBERON:0001637,3.76e-14,42;UBERON:0003509,3.76e-14,42;UBERON:0004572,3.76e-14,42;UBERON:0002329,5.47e-14,71;UBERON:0003059,5.47e-14,71;UBERON:0007282,5.47e-14,71;UBERON:0004290,5.47e-14,71;UBERON:0009618,5.47e-14,71;UBERON:0001134,1.00e-13,62;UBERON:0002036,1.00e-13,62;UBERON:0003082,1.00e-13,62;UBERON:0003077,1.34e-13,72;UBERON:0007285,1.34e-13,72;UBERON:0004573,1.94e-13,33;UBERON:0004571,1.94e-13,33;UBERON:0000486,2.94e-13,83;UBERON:0002385,6.76e-13,64;UBERON:0001015,6.76e-13,64;UBERON:0000383,6.76e-13,64;UBERON:0007503,2.67e-12,78;UBERON:0005256,1.49e-11,122;UBERON:0004872,3.49e-11,83;UBERON:0000947,3.95e-10,21;UBERON:0010191,3.95e-10,21;UBERON:0002199,6.38e-10,46;UBERON:0002416,6.38e-10,46;UBERON:0007500,2.29e-09,59;UBERON:0001981,2.29e-09,59;UBERON:0004537,2.29e-09,59;UBERON:0006965,2.29e-09,59;UBERON:0000490,1.86e-08,148;UBERON:0000926,2.19e-08,315;UBERON:0004120,2.19e-08,315;UBERON:0006603,2.19e-08,315;UBERON:0002097,4.23e-08,41;UBERON:0003914,6.70e-08,117;UBERON:0003102,7.20e-08,99;UBERON:0004237,9.53e-08,10;UBERON:0004695,9.53e-08,10;UBERON:0002111,9.53e-08,10;UBERON:0004178,9.53e-08,10;UBERON:0002100,1.13e-07,199;UBERON:0001135,1.86e-07,15;UBERON:0000055,2.15e-07,68;UBERON:0002384,2.91e-07,371;UBERON:0003104,3.13e-07,160;UBERON:0009142,3.13e-07,160;UBERON:0002049,3.64e-07,78;UBERON:0007798,3.64e-07,78;UBERON:0003688,6.21e-07,6;UBERON:0002358,6.21e-07,6;UBERON:0003684,6.21e-07,6;UBERON:0001178,6.21e-07,6 | |||
|phase1_expression=5.99538651592837,15.6293382440418,3.66481450649525,13.009528785907,16.9845215882369,8.72338524100369,0,1.26343974685366,8.61912573059467,0,0,0,0.527533956456907,0.495065411840187,1.32558950291166,10.7572023432284,11.4511960324556,8.03341099426111,14.6379839637152,0.61560529038394,1.02000345622126,1.25381888591235,0.85870796139317,0.958120975510189,0.376627918784408,0.0764134057479513,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.12786256184353,2.1686349143074,1.00267582127178,3.76600949298142,6.36228757640879,10.2193322763554,0,0.221729397462564,0.527008714158756,0.196468613246569,0,0,0,0,0,0,0,0,0,1.72046919021225,1.38856200643038,0.56530794192401,1.67799774483962,0.825354125820202,1.46296476575767,0.516833518338658,0,0,0.402829317109147,0,1.22031028774085,0,6.48113558305408,0.535798369704479,0.22452937262617,0,0,0,0.732806975721629,0,0,0,1.98788780678127,4.17880688493113,3.17782033951725,19.2180535901705,4.61068896857864,2.24271040056923,3.20246987189115,3.20667812942308,0.622422070799533,0.942974704487816,0.980771418680752,1.36221684880438,1.72852777344,0,1.87296046098192,0,2.09228152772521,0.352303495931295,0.161872944368132,0.280901613404497,2.04154171254893,1.35117749042945,1.85986406116378,7.12801714369232,11.3742787468136,0,1.43723628363248,0.168336113954066,0.875829639103749,0,2.63386572528503,5.51678032438235,6.61047459189026,0.453728732640084,2.51145489964407,4.48470516518992,4.23863802319124,5.70173082560364,3.19462840639161,2.06112432036503,2.23340227597908,7.59493495085698,3.80004320128675,2.27190396819703,4.87864462804187,4.84938170456436,5.68015348026583,1.71278566986988,1.3564847384839,0,0.272746120590835,0,0.121973706129595,0,0.348581828608555,0.310983165046111,0,0,10.9514672630871,21.8701918985581,0,7.89425477654364,6.49691533502627,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.288732895522148,0.925971025153221,0,0,0,0,0,0.743155811443641,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0.380987365753014,0,1.17217447210047,3.4214489204541,0.925447434329912,0.901029173531752,0.571652865261156,0.336393253036082,0,0.07333828582095,5.8172272091,0,0.845302752556,5.31876233169741,5.2003718455683,0.257207374262142,0,0.532844358032199,2.14466990487221,2.17048642156577,0.823240336780769,0.325736184293735,1.06617584622764,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,2.17171960001369,5.75333703141074,2.86497541183833,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0.542530047399471,2.28767947683888,11.9547422494098,5.67728694122165,2.34282829985426,3.00946099727719,29.562975527278,4.1389228517002,1.99267679560631,1.47495334833363,2.78027566297865,2.54541504701563,6.51972505240626,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,6.94701861892575,4.45039722535381,20.2075267991813,5.50998341799514,4.60536524160033,8.04269605718038,4.45254199334973,6.01417805830357,6.5697838365857,1.8067974323038,9.8658341544888,5.46188778761808,0,2.20557117333613,0,1.83703117063371,5.82691737621495,6.68734516293063,0,0,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.215915916102139,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0.9273691048295,0.457847324091717,0.165018999841176,1.14853107599234,0.650060246036521,4.82051789532479,1.93341436584244,0.616194468458578,0.767518373630648,0.413509717453592,2.0409846524972,1.59518363305651,0.681813019328807,0.534192213880424,0.165284915360978,0.576570202095319,0,0.2023155617111,2.78907329578371,16.6850543820239,1.3940745403212,2.46426864140871,0.532306030317022,5.21959795245044,3.7064843820784,0.286249773483982,0.744316738719335,1.89827654831236,1.5250415513906,0.767693373934002,2.1396949401696,0,2.35484592059769,1.97859703341646,4.66712950551293,1.06031162111118,1.2130948894399,0,2.94880919367287,1.46290121726877,5.60541026151954,5.28250733783777,0.818999468447914,9.75697480480618,2.26016233240486,1.65409603063837,7.96126770289464,3.06915619677634,0.578775534266688,3.9353685122798,2.02910376962704,0.6196469961995,2.25356482025793,0.286822704408103,0.687743287091848,1.07001315444375,2.48332744849418,10.5553817648832,18.7698088987144,0.379473173765715,0.699869440489966,0,0.670302275535787,0,0.376575203107117,0.43050537267123,1.68471475667626,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0,1.00177834520615,0,0,1.39473591775749,0.276283915531148,0,0.818149460017238,0,3.42143546427988,0,0,0,1.1837208676432,0,0,0,0,0,0,0,4.34999745260876,0.341380344856499,0,0,0,0,0.173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| |||
|short_description=p4@MMP2 | |||
}} |
Latest revision as of 00:03, 17 September 2015
Short description: | p4@MMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MMP2_5end |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | 21bp_to_DQ385623_5end |
EntrezGene: | MMP2 |
HGNC: | 7166 |
UniProt: | Q2EF79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.22e-22 | 76 |
multi fate stem cell | 2.06e-16 | 427 |
somatic stem cell | 1.45e-15 | 433 |
muscle precursor cell | 1.63e-14 | 58 |
myoblast | 1.63e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-14 | 58 |
stem cell | 1.77e-14 | 441 |
smooth muscle cell | 3.16e-13 | 43 |
smooth muscle myoblast | 3.16e-13 | 43 |
muscle cell | 7.32e-13 | 55 |
preadipocyte | 1.58e-11 | 12 |
electrically responsive cell | 3.28e-11 | 61 |
electrically active cell | 3.28e-11 | 61 |
vascular associated smooth muscle cell | 1.01e-10 | 32 |
skin fibroblast | 8.96e-09 | 23 |
stromal cell | 2.57e-08 | 28 |
aortic smooth muscle cell | 9.53e-08 | 10 |
connective tissue cell | 3.15e-07 | 361 |
mesenchymal cell | 6.73e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.22e-10 | 14 |