FFCP PHASE1:Hg19::chr16:87868136..87868180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:87868136..87868180,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87868136..87868180,- | |||
|id=chr16:87868136..87868180,- | |||
|ontology_enrichment_celltype=CL:0000066!3.67e-19!254;CL:0002076!2.88e-10!43;CL:0002077!1.80e-08!33;CL:0000223!2.17e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002567;5.44e-18;3!CL:0000317;1.76e-12;2!CL:1000448;1.76e-12;2!CL:0002308;1.76e-12;2!CL:0002140;1.76e-12;2!CL:0000575;2.63e-12;2!CL:0002076;9.64e-10;42!CL:0000148;1.87e-09;10!CL:0000154;4.89e-09;6!CL:0002077;4.98e-09;34!CL:0002231;1.32e-08;3!CL:0002577;1.46e-08;3!CL:0002368;2.85e-07;13!CL:0000511;8.47e-07;1!CL:0002625;8.47e-07;1!CL:0002252;8.47e-07;1!CL:0000216;8.47e-07;1!CL:0000147;9.09e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.88e-18,3;CL:0000575,2.35e-12,2;CL:0000317,2.79e-12,2;CL:1000448,2.79e-12,2;CL:0002308,2.79e-12,2;CL:0002140,2.79e-12,2;CL:0000066,7.39e-12,253;CL:0002076,7.66e-12,42;CL:0002077,1.48e-09,34;CL:0000148,1.92e-09,10;CL:0000541,1.92e-09,10;CL:0000154,5.18e-09,6;CL:0002231,1.06e-08,3;CL:0002577,1.33e-08,3;CL:0000223,4.43e-08,58;CL:0002368,2.42e-07,13;CL:0002252,5.37e-07,1;CL:0000511,6.02e-07,1;CL:0002625,6.02e-07,1;CL:0000216,6.02e-07,1;CL:0000147,9.25e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.57e-14!143;DOID:305!2.26e-13!106;DOID:162!2.29e-10!235;DOID:14566!2.82e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.81e-07!9;UBERON:0000065!9.94e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.87e-13;4!UBERON:0004785;2.87e-13;4!UBERON:0000964;3.46e-13;4!UBERON:0010409;3.46e-13;4!UBERON:0002419;1.76e-12;2!UBERON:0007771;1.76e-12;2!UBERON:0003297;1.76e-12;2!UBERON:0001821;1.76e-12;2!UBERON:0003487;1.76e-12;2!UBERON:0001820;1.76e-12;2!UBERON:0000974;5.24e-09;6!UBERON:0001136;8.47e-07;1!UBERON:0001343;8.47e-07;1!UBERON:0004910;8.47e-07;1!UBERON:0004813;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.82e-13,4;UBERON:0004785,2.82e-13,4;UBERON:0000964,5.06e-13,4;UBERON:0010409,5.06e-13,4;UBERON:0004348,5.06e-13,4;UBERON:0005427,5.06e-13,4;UBERON:0002419,2.79e-12,2;UBERON:0007771,2.79e-12,2;UBERON:0003297,2.79e-12,2;UBERON:0001821,2.79e-12,2;UBERON:0003487,2.79e-12,2;UBERON:0001820,2.79e-12,2;UBERON:0005089,2.79e-12,2;UBERON:0005088,2.79e-12,2;UBERON:0005085,6.04e-08,31;UBERON:0001136,6.02e-07,1;UBERON:0001343,6.02e-07,1;UBERON:0004910,6.02e-07,1;UBERON:0005154,6.02e-07,1;UBERON:0005295,6.02e-07,1;UBERON:0004813,6.02e-07,1;UBERON:0005297,6.02e-07,1;UBERON:0005294,6.02e-07,1;UBERON:0010141,6.02e-07,1;UBERON:0005891,6.02e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0.601633342410425,0,0,0,0,0,0.377875943688809,0,0,0,0,0.575384784644301,0.768482119587302,0,0,0,0,0.376484679085209,0.545812300115692,0,1.22433556948361,0,0.639337125799041,0,0.398927315243264,0,0.870627715885752,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,1.0843174571537,0.50133791063589,0.434539556882471,1.5905718941022,0,0.189069634328136,0,0.175669571386252,0.196468613246569,2.18577172975525,1.48313777113772,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,1.74437620857014,0.496971951695318,0.12663051166458,0,0.860509862246441,0,0,0,0.74000264525148,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0.573609190778008,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,0.482022059766964,0.55146986366197,0.653638332277218,0.474541238222193,0.269662616320329,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.658501712451753,0,0.402115889646523,0.740707561268237,0.325808305310325,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,1.45316969256981,1.91691339582606,0.492663237895943,0,0,0,0.25248486685276,0.444485260045183,2.67391897890794,1.17217447210047,5.13217338068116,0.822619941626588,2.70308752059526,0.571652865261156,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0.234282829985426,0,0,2.0694614258501,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,3.32870879020994,1.5119514666484,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,1.60405176242628,4.9723734025384,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0.325378394664303,0,0,0.165018999841176,1.14853107599234,4.55042172225565,1.6068392984416,0.870036464629098,0,0,0,0,0,0.255679882248303,0.267096106940212,4.29740779938543,1.92190067365106,0.382838137483752,2.4277867405332,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.577332676353072,0,2.17781969722645,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0.371606350251437,0,0.284567373393656,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.329607748453519,0,0,0,0,0,0.246169610922139,0.311039587661807,0,1.79021174675609,0.511572370226872,0,0,0,0,0.0927680981618513,0,2.08342208868187,0,0,0.910347586283997,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.544692317594951,1.39423744278603,0,0.113942055847001,0.69169171316418,0.718061155278177,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.848118428603645,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0.661983911750998,0,0,0,0.693373365065693,0.520679215005393,0.489961987071888,0.435296032902013,0.34945333648406,0,0.387025325156341,0.219267951258557,0.246346371159628,0.387956065953678,0.176512253383001,0,0.137041924646751,0,0,0.586654148204409,0.320635281006135,0,0.19980960958213,0,0,0.514784993585894,0.864328787928898,0,0.707082103850386,0,0.104602846312333,0.611989305817931,0.288950589901519,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0.242998226632099,0.670869375198532,0.0788057072991982,0,0,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0.864221491201268,0,0,0.164185041498678,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0.454947352624943,1.14186133417987,0.470531639396343,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.226705925512272,0.463044948647668,0.489473409012935,0.179088841081487,0,0.438568099157414,0.176689145945881,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0,0,0.655219697692825,0,0.211312123358627,0,0.320075189082423,0.688859918643263,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0,0.314531883711793,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,3.92590874004102,0.943757786781923,1.65085738669511,1.15525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0,0.781078098613847,0.413373593002368,0,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0.0657727735628491,0.354581522651905,0,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.31020638566432,0,0.671132590786754,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0.301925687133347,0,0,1.41095188908457,0.245148321753905,0.707029641304878,0,0,0,0.169927114687817,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0,0,0.459474497674225,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0,0,0.325613074443898,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:87868136..87868180,- | |||
}} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87868136..87868180, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87868136..87868180, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.88e-18 | 3 |
corneal epithelial cell | 2.35e-12 | 2 |
sebum secreting cell | 2.79e-12 | 2 |
epithelial cell of sweat gland | 2.79e-12 | 2 |
epithelial cell of skin gland | 2.79e-12 | 2 |
acinar cell of sebaceous gland | 2.79e-12 | 2 |
epithelial cell | 7.39e-12 | 253 |
endo-epithelial cell | 7.66e-12 | 42 |
ecto-epithelial cell | 1.48e-09 | 34 |
melanocyte | 1.92e-09 | 10 |
melanoblast | 1.92e-09 | 10 |
protein secreting cell | 5.18e-09 | 6 |
epithelial cell of prostate | 1.06e-08 | 3 |
placental epithelial cell | 1.33e-08 | 3 |
endodermal cell | 4.43e-08 | 58 |
respiratory epithelial cell | 2.42e-07 | 13 |
epithelial cell of esophagus | 5.37e-07 | 1 |
androgen binding protein secreting cell | 6.02e-07 | 1 |
seminiferous tubule epithelial cell | 6.02e-07 | 1 |
Sertoli cell | 6.02e-07 | 1 |
pigment cell | 9.25e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.82e-13 | 4 |
respiratory system mucosa | 2.82e-13 | 4 |
cornea | 5.06e-13 | 4 |
eye surface | 5.06e-13 | 4 |
optic eminence | 5.06e-13 | 4 |
corneal primordium | 5.06e-13 | 4 |
skin gland | 2.79e-12 | 2 |
epidermis gland | 2.79e-12 | 2 |
gland of integumental system | 2.79e-12 | 2 |
sebaceous gland | 2.79e-12 | 2 |
skin sebaceous gland | 2.79e-12 | 2 |
sweat gland | 2.79e-12 | 2 |
sweat gland placode | 2.79e-12 | 2 |
sebaceous gland placode | 2.79e-12 | 2 |
ectodermal placode | 6.04e-08 | 31 |
mesothelium | 6.02e-07 | 1 |
seminiferous tubule of testis | 6.02e-07 | 1 |
epithelium of male gonad | 6.02e-07 | 1 |
epithelial cord | 6.02e-07 | 1 |
sex cord | 6.02e-07 | 1 |
seminiferous tubule epithelium | 6.02e-07 | 1 |
testis sex cord | 6.02e-07 | 1 |
genital ridge | 6.02e-07 | 1 |
primitive sex cord of indifferent gonad | 6.02e-07 | 1 |
coelomic epithelium | 6.02e-07 | 1 |