FFCP PHASE1:Hg19::chr17:1547809..1547830,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16820 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK311370_5end | |||
|cluster_id=chr17:1547809..1547830,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_SCARF1_5end | |||
|id=chr17:1547809..1547830,- | |||
|ontology_enrichment_celltype=CL:0002057!4.32e-79!42;CL:0000860!4.18e-73!45;CL:0000766!1.33e-69!76;CL:0002009!2.06e-58!65;CL:0000557!2.63e-55!71;CL:0000738!9.01e-55!140;CL:0002194!5.08e-54!63;CL:0000576!5.08e-54!63;CL:0000040!5.08e-54!63;CL:0000559!5.08e-54!63;CL:0000839!3.27e-50!70;CL:0000763!8.09e-48!112;CL:0000049!8.09e-48!112;CL:0000037!1.30e-43!172;CL:0000566!1.30e-43!172;CL:0000988!5.36e-42!182;CL:0002087!7.98e-41!119;CL:0002032!5.09e-39!165;CL:0000837!5.09e-39!165;CL:0002031!8.63e-39!124;CL:0000094!6.64e-22!8;CL:0000134!1.08e-15!358;CL:0000081!1.69e-15!11;CL:0002320!4.21e-15!365;CL:0000219!5.00e-13!390;CL:0000048!7.15e-12!430;CL:0000034!1.03e-11!444;CL:0000723!1.69e-11!436;CL:0002393!2.43e-10!9;CL:0002397!2.43e-10!9;CL:0000775!3.03e-09!3;CL:0000767!7.46e-09!3;CL:0000842!2.21e-08!3;CL:0000840!2.52e-07!5;CL:0001029!2.52e-07!5;CL:0000771!3.25e-07!2;CL:0000080!6.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-87;33!CL:0002057;3.40e-87;33!CL:0000473;6.31e-61;39!CL:0000234;6.31e-61;39!CL:0000576;1.56e-49;48!CL:0000766;7.13e-39;69!CL:0000094;1.27e-35;8!CL:0000081;1.42e-25;11!CL:0000763;1.95e-18;100!CL:0000775;2.32e-14;3!CL:0002087;4.29e-14;104!CL:0000767;8.66e-14;3!CL:0000738;2.93e-12;136!CL:0000771;5.15e-11;2!CL:0001014;3.86e-10;2!CL:0001016;3.86e-10;2!CL:0000988;1.28e-07;177!CL:0002393;1.70e-07;6!CL:0002397;1.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-93,42;CL:0002057,1.52e-93,42;CL:0000766,1.40e-84,72;CL:0000473,5.25e-81,48;CL:0000234,5.25e-81,48;CL:0002009,3.85e-70,61;CL:0002194,1.90e-63,59;CL:0000576,1.90e-63,59;CL:0000040,1.90e-63,59;CL:0000559,1.90e-63,59;CL:0000557,2.50e-63,67;CL:0000763,1.36e-60,108;CL:0000049,1.36e-60,108;CL:0000839,4.14e-56,66;CL:0000738,7.97e-52,136;CL:0000037,1.69e-40,168;CL:0002032,3.49e-38,161;CL:0000837,3.49e-38,161;CL:0000988,4.80e-38,177;CL:0000094,1.43e-35,8;CL:0002087,5.56e-34,115;CL:0002031,1.80e-32,120;CL:0000081,1.54e-25,11;CL:0000134,5.41e-15,354;CL:0002320,1.53e-14,361;CL:0000775,2.21e-14,3;CL:0000767,9.91e-14,3;CL:0000219,5.94e-13,386;CL:0000034,3.10e-11,441;CL:0000048,5.26e-11,427;CL:0000771,5.28e-11,2;CL:0000723,9.78e-11,433;CL:0001014,3.86e-10,2;CL:0001016,3.86e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-69;42!CL:0000049;3.16e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.20e-52!102;UBERON:0003061!3.20e-52!102;UBERON:0002371!2.02e-50!80;UBERON:0002193!1.37e-48!112;UBERON:0001474!4.00e-46!86;UBERON:0004765!1.33e-37!101;UBERON:0001434!1.33e-37!101;UBERON:0002405!6.74e-37!115;UBERON:0003081!4.92e-20!216;UBERON:0002204!1.99e-19!167;UBERON:0002384!2.68e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.26e-55,76;UBERON:0001474,1.34e-50,82;UBERON:0002390,6.23e-50,98;UBERON:0003061,6.23e-50,98;UBERON:0004765,1.58e-45,90;UBERON:0002193,1.15e-44,108;UBERON:0002405,7.58e-44,93;UBERON:0001434,2.59e-40,100;UBERON:0002204,2.18e-21,167;UBERON:0003081,2.34e-20,203;UBERON:0002384,6.30e-14,371;UBERON:0000926,1.83e-10,315;UBERON:0004120,1.83e-10,315;UBERON:0006603,1.83e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,2.36018566109342,2.30297638858328,2.16742572642506,0,0,0,0,0,0.293600439334847,9.41792194504192,6.61796676651468,11.2845652772243,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,2.78914844286822,3.70051099219643,5.57471467611186,43.1538588483226,30.7392847834921,39.7290146212823,9.3081333798887,13.5551783552603,16.251178391321,1.31769637679823,1.36453075028923,1.12361742222542,5.50951006267625,2.56743221660875,9.59005688698562,15.8328624089624,13.7629923758926,15.344091019177,10.447532590629,19.8584828641899,21.1759564658495,38.4410457842817,37.5467701262545,36.2705370657545,6.05399502633369,16.5724936194404,15.1901945971625,0.211255286311942,0.425208599930087,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3094960102945,58.1670396222488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77005821767849,0,0,0,0,0,7.49007023947182,8.97484377612075,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@SCARF1 | |||
}} |
Latest revision as of 18:33, 18 September 2015
Short description: | p2@SCARF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCARF1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_AK311370_5end |
EntrezGene: | SCARF1 |
HGNC: | 16820 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.26e-55 | 76 |
bone element | 1.34e-50 | 82 |
hematopoietic system | 6.23e-50 | 98 |
blood island | 6.23e-50 | 98 |
skeletal element | 1.58e-45 | 90 |
hemolymphoid system | 1.15e-44 | 108 |
immune system | 7.58e-44 | 93 |
skeletal system | 2.59e-40 | 100 |
musculoskeletal system | 2.18e-21 | 167 |
lateral plate mesoderm | 2.34e-20 | 203 |
connective tissue | 6.30e-14 | 371 |
mesoderm | 1.83e-10 | 315 |
mesoderm-derived structure | 1.83e-10 | 315 |
presumptive mesoderm | 1.83e-10 | 315 |