FFCP PHASE1:Hg19::chr17:33812952..33812957,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:33812952..33812957,- | |||
|description=CAGE_peak_at_chr17:33812952..33812957,- | |||
|id=chr17:33812952..33812957,- | |||
|ontology_enrichment_celltype=CL:0000791!1.79e-25!18;CL:0000789!1.79e-25!18;CL:0002420!1.79e-25!18;CL:0002419!1.79e-25!18;CL:0000790!1.79e-25!18;CL:0000838!2.55e-24!52;CL:0000542!9.29e-24!53;CL:0000051!9.29e-24!53;CL:0000084!1.03e-20!25;CL:0000827!1.03e-20!25;CL:0002087!1.78e-15!119;CL:0000625!1.07e-14!11;CL:0000738!2.59e-13!140;CL:0000037!2.14e-12!172;CL:0000566!2.14e-12!172;CL:0000988!2.79e-12!182;CL:0002031!3.27e-12!124;CL:0000623!6.79e-12!3;CL:0000825!6.79e-12!3;CL:0002032!3.12e-11!165;CL:0000837!3.12e-11!165;CL:0000624!1.67e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.06e-21;3!CL:0002127;1.78e-16;1!CL:0000911;1.78e-16;1!CL:0000814;1.78e-16;1!CL:0000791;3.52e-08;18!CL:0000789;3.52e-08;18!CL:0002419;3.52e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.96e-21,3;CL:0000825,1.96e-21,3;CL:0002127,3.07e-16,1;CL:0000914,3.07e-16,1;CL:0000911,3.07e-16,1;CL:0000814,3.07e-16,1;CL:0002042,3.07e-16,1;CL:0002039,3.07e-16,1;CL:0002040,3.07e-16,1;CL:0002041,3.07e-16,1;CL:0000893,8.74e-09,2;CL:0002489,8.74e-09,2;CL:0000809,8.74e-09,2;CL:0000808,8.74e-09,2;CL:0000894,8.74e-09,2;CL:0000806,8.74e-09,2;CL:0000807,8.74e-09,2;CL:0000805,8.74e-09,2;CL:0002425,8.74e-09,2;CL:0000791,4.03e-08,18;CL:0000789,4.03e-08,18;CL:0002420,4.03e-08,18;CL:0002419,4.03e-08,18;CL:0000790,4.03e-08,18;CL:0000838,2.67e-07,52;CL:0000542,3.67e-07,53;CL:0000051,3.67e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002425;6.67e-09;2!CL:0000790;3.52e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,1.20326668482085,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,1.23360899399706,0.334372990781356,0.32592226663359,0.473447805734733,0,0,0,0,1.62482318259009,2.43373507478783,2.47112760363769,2.46656856905514,1.93445012450094,0.869409257205157,0.444859689486181,0.267540828089713,0,0.566546713487831,0,0.68725489096526,1.26509846009751,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.604820229674197,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.394061520403854,2.15627574859517,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p@chr17:33812952..33812957,- | |||
}} |
Latest revision as of 15:39, 25 July 2015
Short description: | p@chr17:33812952..33812957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:33812952..33812957, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.96e-21 | 3 |
pro-NK cell | 1.96e-21 | 3 |
innate effector T cell | 3.07e-16 | 1 |
immature NK T cell | 3.07e-16 | 1 |
effector T cell | 3.07e-16 | 1 |
mature NK T cell | 3.07e-16 | 1 |
immature NK T cell stage IV | 3.07e-16 | 1 |
immature NK T cell stage I | 3.07e-16 | 1 |
immature NK T cell stage II | 3.07e-16 | 1 |
immature NK T cell stage III | 3.07e-16 | 1 |
thymocyte | 8.74e-09 | 2 |
double negative thymocyte | 8.74e-09 | 2 |
double-positive, alpha-beta thymocyte | 8.74e-09 | 2 |
DN4 thymocyte | 8.74e-09 | 2 |
DN1 thymic pro-T cell | 8.74e-09 | 2 |
DN2 thymocyte | 8.74e-09 | 2 |
DN3 thymocyte | 8.74e-09 | 2 |
immature single positive thymocyte | 8.74e-09 | 2 |
early T lineage precursor | 8.74e-09 | 2 |
mature alpha-beta T cell | 4.03e-08 | 18 |
alpha-beta T cell | 4.03e-08 | 18 |
immature T cell | 4.03e-08 | 18 |
mature T cell | 4.03e-08 | 18 |
immature alpha-beta T cell | 4.03e-08 | 18 |
lymphoid lineage restricted progenitor cell | 2.67e-07 | 52 |
lymphocyte | 3.67e-07 | 53 |
common lymphoid progenitor | 3.67e-07 | 53 |