FFCP PHASE1:Hg19::chr17:38173175..38173226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:38173175..38173226,+ | |||
|coexpression_cluster_id=C1432 | |||
|description=CAGE_peak_at_chr17:38173175..38173226,+ | |||
|id=chr17:38173175..38173226,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.67e-15!32;CL:0000680!4.64e-14!57;CL:0000056!4.64e-14!57;CL:0000355!4.64e-14!57;CL:0000192!5.56e-13!42;CL:0000514!5.56e-13!42;CL:0002539!1.09e-12!10;CL:0000187!3.27e-11!54;CL:0000183!8.95e-10!59;CL:0000393!1.62e-09!60;CL:0000211!1.62e-09!60;CL:0002595!1.32e-07!5;CL:0000220!7.03e-07!246;CL:0002621!7.73e-07!3;CL:0002321!9.84e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.66e-28;32!CL:0002539;5.28e-18;10!CL:0002595;5.26e-17;5!CL:0000192;5.05e-16;43!CL:0002593;6.09e-12;2!CL:0000317;1.12e-10;2!CL:1000448;1.12e-10;2!CL:0002308;1.12e-10;2!CL:0002140;1.12e-10;2!CL:0002138;1.46e-08;6!CL:0002592;8.92e-08;3!CL:0002621;1.43e-07;3!CL:0000187;2.71e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.18e-28,32;CL:0000192,2.42e-20,43;CL:0000514,2.42e-20,43;CL:0002539,5.79e-18,10;CL:0002595,3.96e-17,5;CL:0000187,3.05e-15,55;CL:0000680,2.68e-14,58;CL:0000056,2.68e-14,58;CL:0000355,2.68e-14,58;CL:0000393,1.90e-13,61;CL:0000211,1.90e-13,61;CL:0002593,5.94e-12,2;CL:0000317,1.43e-10,2;CL:1000448,1.43e-10,2;CL:0002308,1.43e-10,2;CL:0002140,1.43e-10,2;CL:0005020,1.43e-08,6;CL:0002138,1.43e-08,6;CL:0005022,1.43e-08,6;CL:0000222,1.56e-08,121;CL:0002621,1.02e-07,3;CL:0002592,1.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;5.05e-16;43!CL:0005022;1.46e-08;6!CL:0000355;5.65e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.32e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.19e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.10e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!7.58e-15!82;UBERON:0004573!1.41e-14!33;UBERON:0004571!1.41e-14!33;UBERON:0002385!2.16e-14!63;UBERON:0001015!2.16e-14!63;UBERON:0000383!2.16e-14!63;UBERON:0001134!6.45e-14!61;UBERON:0002036!6.45e-14!61;UBERON:0003082!6.45e-14!61;UBERON:0001135!6.51e-14!15;UBERON:0004290!1.79e-13!70;UBERON:0004237!1.09e-12!10;UBERON:0004695!1.09e-12!10;UBERON:0002111!1.09e-12!10;UBERON:0004178!1.09e-12!10;UBERON:0001637!9.87e-12!42;UBERON:0003509!9.87e-12!42;UBERON:0004572!9.87e-12!42;UBERON:0000914!3.00e-11!83;UBERON:0002329!3.00e-11!83;UBERON:0003077!3.00e-11!83;UBERON:0003059!3.00e-11!83;UBERON:0007282!3.00e-11!83;UBERON:0009618!3.00e-11!83;UBERON:0007285!3.00e-11!83;UBERON:0000055!6.72e-11!69;UBERON:0002118!1.90e-10!5;UBERON:0004532!1.90e-10!5;UBERON:0000992!2.98e-09!13;UBERON:0002049!1.07e-08!79;UBERON:0007798!1.07e-08!79;UBERON:0001981!1.29e-08!60;UBERON:0007500!1.29e-08!60;UBERON:0004537!1.29e-08!60;UBERON:0006965!1.29e-08!60;UBERON:0004535!9.83e-08!110;UBERON:0004872!1.17e-07!84;UBERON:0003834!1.32e-07!5;UBERON:0001533!1.32e-07!5;UBERON:0001009!2.45e-07!113;UBERON:0001949!7.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.21e-25;33!UBERON:0004571;9.21e-25;33!UBERON:0004237;5.28e-18;10!UBERON:0004695;5.28e-18;10!UBERON:0002111;5.28e-18;10!UBERON:0004178;5.28e-18;10!UBERON:0003834;5.26e-17;5!UBERON:0001533;5.26e-17;5!UBERON:0001637;1.34e-16;42!UBERON:0003509;1.34e-16;42!UBERON:0004572;1.34e-16;42!UBERON:0000992;2.21e-13;13!UBERON:0003513;3.52e-12;7!UBERON:0002119;5.41e-12;4!UBERON:0002456;6.09e-12;2!UBERON:0001135;8.31e-12;15!UBERON:0002419;1.12e-10;2!UBERON:0007771;1.12e-10;2!UBERON:0003297;1.12e-10;2!UBERON:0001821;1.12e-10;2!UBERON:0003487;1.12e-10;2!UBERON:0001820;1.12e-10;2!UBERON:0002118;1.51e-09;5!UBERON:0000055;8.36e-09;65!UBERON:0000947;2.94e-08;21!UBERON:0010191;2.94e-08;21!UBERON:0000991;4.61e-08;21!UBERON:0003498;8.92e-08;3!UBERON:0005985;8.92e-08;3!UBERON:0001621;8.92e-08;3!UBERON:0001949;1.43e-07;3!UBERON:0002049;2.11e-07;75!UBERON:0007798;2.11e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.96e-27,33;UBERON:0004571,1.96e-27,33;UBERON:0001637,6.70e-21,42;UBERON:0003509,6.70e-21,42;UBERON:0004572,6.70e-21,42;UBERON:0000055,4.32e-18,68;UBERON:0004237,5.79e-18,10;UBERON:0004695,5.79e-18,10;UBERON:0002111,5.79e-18,10;UBERON:0004178,5.79e-18,10;UBERON:0003834,3.96e-17,5;UBERON:0001533,3.96e-17,5;UBERON:0002049,2.78e-15,78;UBERON:0007798,2.78e-15,78;UBERON:0007500,5.27e-14,59;UBERON:0001981,5.27e-14,59;UBERON:0004537,5.27e-14,59;UBERON:0006965,5.27e-14,59;UBERON:0000992,2.11e-13,13;UBERON:0001134,3.50e-13,62;UBERON:0002036,3.50e-13,62;UBERON:0003082,3.50e-13,62;UBERON:0004535,1.03e-12,109;UBERON:0002385,1.12e-12,64;UBERON:0001015,1.12e-12,64;UBERON:0000383,1.12e-12,64;UBERON:0003513,2.88e-12,7;UBERON:0001009,2.93e-12,112;UBERON:0000486,3.17e-12,83;UBERON:0004872,3.37e-12,83;UBERON:0002119,4.49e-12,4;UBERON:0002456,5.94e-12,2;UBERON:0001135,8.82e-12,15;UBERON:0002329,3.90e-11,71;UBERON:0003059,3.90e-11,71;UBERON:0007282,3.90e-11,71;UBERON:0004290,3.90e-11,71;UBERON:0009618,3.90e-11,71;UBERON:0003077,6.12e-11,72;UBERON:0007285,6.12e-11,72;UBERON:0007524,9.48e-11,73;UBERON:0002419,1.43e-10,2;UBERON:0007771,1.43e-10,2;UBERON:0003297,1.43e-10,2;UBERON:0001821,1.43e-10,2;UBERON:0003487,1.43e-10,2;UBERON:0001820,1.43e-10,2;UBERON:0005089,1.43e-10,2;UBERON:0005088,1.43e-10,2;UBERON:0007503,7.14e-10,78;UBERON:0002118,1.65e-09,5;UBERON:0002204,1.52e-08,167;UBERON:0000947,3.06e-08,21;UBERON:0010191,3.06e-08,21;UBERON:0000991,4.50e-08,21;UBERON:0009196,4.50e-08,21;UBERON:0009117,4.50e-08,21;UBERON:0005564,4.50e-08,21;UBERON:0001949,1.02e-07,3;UBERON:0004176,1.11e-07,22;UBERON:0003914,1.14e-07,117;UBERON:0001621,1.21e-07,3;UBERON:0003081,4.33e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,2.41077811209591,3.65155045193687,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,1.37898272294647,0,0,0,0,0,1.22433556948361,1.28371610830437,0,0,0,0,2.90209238628584,0.56738522469114,1.86846674698672,0,0,0,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.538842688278752,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,2.72746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,4.04226053731007,12.5006088395685,6.65889532821094,0,0,0,0,0,0,0,1.41775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,7.78881643775432,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,1.30012049207304,0,0.773365746336976,0,0,0.275673144969061,0,0,0,0,0,0,0.382838137483752,0,0,0.31481234683064,2.0911118104818,4.92853728281742,2.12922412126809,0,1.11194531462352,0,0,0,0,0,0,0,17.2688700843831,0.179872457583315,0,0.117812402345686,1.01091240786658,0,12.2164952309305,0,14.8665228675083,17.9605249486484,0,0,0,0,3.98063385144732,1.75380354101505,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,5.89936136621401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,1.60181118851542,0.314408610199332,0.414239055347196,0,0,0,0,0,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0,0,6.35777144955426,1.27437413730962,38.2332645339064,1.86315548251511,0,0,0.521745061811734,0,0,0.813741466409323,4.00067050245631,0.537052785212442,1.39210127963548,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0,3.15577703727776,0,0.407016343054873,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:38173175..38173226,+ | |||
}} |
Latest revision as of 16:17, 25 July 2015
Short description: | p@chr17:38173175..38173226, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38173175..38173226, + |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.18e-28 | 32 |
smooth muscle cell | 2.42e-20 | 43 |
smooth muscle myoblast | 2.42e-20 | 43 |
aortic smooth muscle cell | 5.79e-18 | 10 |
smooth muscle cell of the subclavian artery | 3.96e-17 | 5 |
muscle cell | 3.05e-15 | 55 |
muscle precursor cell | 2.68e-14 | 58 |
myoblast | 2.68e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.68e-14 | 58 |
electrically responsive cell | 1.90e-13 | 61 |
electrically active cell | 1.90e-13 | 61 |
smooth muscle cell of the internal thoracic artery | 5.94e-12 | 2 |
sebum secreting cell | 1.43e-10 | 2 |
epithelial cell of sweat gland | 1.43e-10 | 2 |
epithelial cell of skin gland | 1.43e-10 | 2 |
acinar cell of sebaceous gland | 1.43e-10 | 2 |
lymphangioblast | 1.43e-08 | 6 |
endothelial cell of lymphatic vessel | 1.43e-08 | 6 |
vascular lymphangioblast | 1.43e-08 | 6 |
mesodermal cell | 1.56e-08 | 121 |
gingival epithelial cell | 1.02e-07 | 3 |
smooth muscle cell of the coronary artery | 1.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.10e-12 | 14 |