FFCP PHASE1:Hg19::chr17:38613071..38613097,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:38613071..38613097,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613071..38613097,+ | |||
|id=chr17:38613071..38613097,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.99e-24!180;CL:0000222!1.03e-18!119;CL:0000183!6.28e-16!59;CL:0000680!3.62e-15!57;CL:0000056!3.62e-15!57;CL:0000355!3.62e-15!57;CL:0000057!4.48e-14!75;CL:0000187!1.07e-13!54;CL:0000393!5.18e-12!60;CL:0000211!5.18e-12!60;CL:0000192!9.22e-12!42;CL:0000514!9.22e-12!42;CL:0000144!6.54e-09!625;CL:0002371!7.56e-09!591;CL:0000359!1.69e-08!32;CL:0000220!1.36e-07!246;CL:0002321!1.90e-07!248;CL:0000048!6.04e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.81e-09;43!CL:0000359;2.69e-08;32!CL:0000187;1.22e-07;55!CL:0000499;7.16e-07;28!CL:0000327;7.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.28e-15,58;CL:0000056,5.28e-15,58;CL:0000355,5.28e-15,58;CL:0000187,6.30e-13,55;CL:0000048,6.84e-13,427;CL:0000057,7.65e-13,76;CL:0000723,2.95e-12,433;CL:0000192,6.48e-12,43;CL:0000514,6.48e-12,43;CL:0000034,1.92e-11,441;CL:0000393,9.79e-11,61;CL:0000211,9.79e-11,61;CL:0000222,5.19e-10,121;CL:0000359,2.00e-08,32;CL:0000327,5.15e-07,15;CL:0000499,5.33e-07,28;CL:0000136,7.78e-07,15;CL:0002320,8.56e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.81e-09;43!CL:0000355;1.81e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.39e-18!143;UBERON:0000914!1.56e-14!83;UBERON:0002329!1.56e-14!83;UBERON:0003077!1.56e-14!83;UBERON:0003059!1.56e-14!83;UBERON:0007282!1.56e-14!83;UBERON:0009618!1.56e-14!83;UBERON:0007285!1.56e-14!83;UBERON:0003914!3.59e-14!118;UBERON:0004872!5.11e-13!84;UBERON:0002385!6.26e-13!63;UBERON:0001015!6.26e-13!63;UBERON:0000383!6.26e-13!63;UBERON:0001134!7.56e-13!61;UBERON:0002036!7.56e-13!61;UBERON:0003082!7.56e-13!61;UBERON:0002049!1.15e-12!79;UBERON:0007798!1.15e-12!79;UBERON:0000490!1.19e-12!138;UBERON:0002100!1.51e-12!216;UBERON:0004290!3.84e-12!70;UBERON:0000486!9.06e-12!82;UBERON:0000055!3.22e-10!69;UBERON:0004535!3.55e-10!110;UBERON:0001009!5.11e-10!113;UBERON:0003104!1.65e-09!238;UBERON:0009142!1.65e-09!238;UBERON:0001981!2.64e-09!60;UBERON:0007500!2.64e-09!60;UBERON:0004537!2.64e-09!60;UBERON:0006965!2.64e-09!60;UBERON:0001013!6.08e-08!14;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0000477!1.51e-07!286;UBERON:0000481!3.09e-07!347;UBERON:0000926!7.81e-07!448;UBERON:0004120!7.81e-07!448;UBERON:0006603!7.81e-07!448;UBERON:0001637!8.14e-07!42;UBERON:0003509!8.14e-07!42;UBERON:0004572!8.14e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.46e-09;9!UBERON:0000042;2.46e-09;9!UBERON:0004905;2.72e-09;8!UBERON:0000982;2.72e-09;8!UBERON:0004770;2.72e-09;8!UBERON:0001013;1.42e-08;14!UBERON:0011135;3.31e-08;5!UBERON:0002216;3.31e-08;5!UBERON:0011134;3.31e-08;5!UBERON:0002209;3.31e-08;5!UBERON:0002213;3.31e-08;5!UBERON:0007844;3.31e-08;5!UBERON:0011138;3.31e-08;5!UBERON:0001130;3.31e-08;5!UBERON:0001066;3.31e-08;5!UBERON:0001468;3.31e-08;5!UBERON:0003688;4.20e-08;6!UBERON:0002358;4.20e-08;6!UBERON:0003684;4.20e-08;6!UBERON:0001178;4.20e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.53e-15,78;UBERON:0007524,1.50e-14,73;UBERON:0002329,4.34e-14,71;UBERON:0003059,4.34e-14,71;UBERON:0007282,4.34e-14,71;UBERON:0004290,4.34e-14,71;UBERON:0009618,4.34e-14,71;UBERON:0003077,9.89e-14,72;UBERON:0007285,9.89e-14,72;UBERON:0005256,1.09e-13,122;UBERON:0001134,2.38e-13,62;UBERON:0002036,2.38e-13,62;UBERON:0003082,2.38e-13,62;UBERON:0000486,2.91e-13,83;UBERON:0003104,5.93e-13,160;UBERON:0009142,5.93e-13,160;UBERON:0002385,1.31e-12,64;UBERON:0001015,1.31e-12,64;UBERON:0000383,1.31e-12,64;UBERON:0004905,2.74e-09,8;UBERON:0000982,2.74e-09,8;UBERON:0004770,2.74e-09,8;UBERON:0001013,1.58e-08,14;UBERON:0000490,2.33e-08,148;UBERON:0011135,3.30e-08,5;UBERON:0002216,3.30e-08,5;UBERON:0011134,3.30e-08,5;UBERON:0002209,3.30e-08,5;UBERON:0002213,3.30e-08,5;UBERON:0005856,3.30e-08,5;UBERON:0005866,3.30e-08,5;UBERON:0005863,3.30e-08,5;UBERON:0007844,3.30e-08,5;UBERON:0011138,3.30e-08,5;UBERON:0001130,3.30e-08,5;UBERON:0001066,3.30e-08,5;UBERON:0001468,3.30e-08,5;UBERON:0003688,4.97e-08,6;UBERON:0002358,4.97e-08,6;UBERON:0003684,4.97e-08,6;UBERON:0001178,4.97e-08,6;UBERON:0002100,1.16e-07,199;UBERON:0002204,5.91e-07,167;UBERON:0000926,7.12e-07,315;UBERON:0004120,7.12e-07,315;UBERON:0006603,7.12e-07,315 | |||
|phase1_expression=3.81524596468169,1.07050261945492,2.39622486963151,5.00366491765652,3.12872766099101,6.97870819280295,2.53299878168311,0.631719873426831,4.17897005119742,0.491467873003018,0.697801167972428,0,0.263766978228454,8.91117741312336,10.6047160232933,2.01697543935533,1.80808358407193,2.19093027116212,0.975865597581014,0,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.383587685530591,4.3372698286148,9.02408239144601,11.7325680358267,0,1.94653948121054,0,1.99556457716308,1.31752178539689,0.327447688744282,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,2.28081631715554,0.976248230192678,0,0,0.446498641420399,0.22452937262617,0.450445921933289,0,0.949265659568129,1.09921046358244,0,0,0,0.496971951695318,0.759783069987479,0.794455084879313,1.43418310374407,0.354668382198357,5.04609840128076,1.06748995729705,1.72667283892012,1.24484414159907,0.404132016209064,0.326923806226917,2.57307626996383,1.72852777344,0,2.18512053781224,0,1.19558944441441,0,0,0,1.83738754129404,0.61417158655884,2.37649296704261,1.18800285728205,2.71993622206413,0,2.87447256726495,0.841680569770331,1.00094815897571,0.831192346452549,0.877955241761676,8.27517048657353,5.10809400282429,0.907457465280168,0.358779271377724,1.2813443329114,2.7551147150743,0,1.23663035086127,1.03056216018252,2.23340227597908,0,0.584622030967192,0.252433774244115,2.39329736469978,1.77810662500693,0.710019185033229,0.403008392910561,1.3564847384839,0,0,0,0.121973706129595,0,0.348581828608555,0,0.504641701751257,0,4.69348596989448,2.57296375277154,0,6.50115099244771,4.33127689001751,0,0,0.241011029883482,0,0.217879444092406,0,0,0.392442930250692,0,0.738155454624648,1.40241773803446,1.2347220339942,1.47008711385542,5.07020139287323,6.87979051674338,0.590789906681404,0,0,0.343135620597051,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0.469634776943287,0.866198686566443,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.672786506072164,0.43596006883328,1.9067954313447,0,3.57656445851882,2.535908257668,1.59562869950922,4.16029747645464,2.82928111688356,0,2.1313774321288,2.7165818795048,0.542621605391443,0,0.65147236858747,1.06617584622764,5.543663110534,2.1100756394171,0.871533458600294,2.39935178836937,0,0,0,0.718874566474748,3.44585807502342,0,2.60606352001643,3.90405012845728,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,9.32455337065463,18.0061387581484,8.95174578209127,6.23912584592421,7.49401752948079,5.36188211115378,3.16281820480326,2.10662269809403,4.5481500811197,2.0694614258501,2.65690239414175,2.58116835958384,1.47702144595741,6.46143819627044,1.37257369524342,0,0,0,1.21251028578504,0,2.41912234663744,1.48864684691266,0.61384789315225,1.96462066103151,3.71603532841533,4.60536524160033,2.2519548960105,2.96836132889982,0.462629081407967,1.77561725313127,0.410635780069046,0.519254429183621,1.74315567689939,0.241718899183244,0.200506470303285,0,0.68888668898764,1.27463817604702,0.786746489756545,0.451199612907412,0.462092022626489,0.784349769176855,0,0,1.13733384070897,0.680374821106063,0.215915916102139,3.08454505380579,1.62567862526312,4.01351819083883,0,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0,0,0,1.6068392984416,0.773365746336976,1.23238893691716,1.5350367472613,0.413509717453592,1.6113036730241,3.0453505721988,1.44885266607372,0.979352392114111,0,0.384380134730212,0,0,3.71876439437829,2.51849877464512,0.6970372701606,0.308033580176089,1.06461206063404,1.73986598415015,0.9266210955196,0,2.97726695487734,3.79655309662471,2.09693213316207,1.02359116524534,1.28381696410176,2.54562598340749,0.78494864019923,0.179872457583315,1.64722217841633,1.53156123049392,1.41527737101321,0,1.26377536871694,0.48763373908959,1.94970791705028,7.39551027297288,0.9554993798559,1.41405431953713,0,3.30819206127675,0.66343897524122,3.06915619677634,4.6302042741335,1.9676842561399,0,1.239293992399,1.40847801266121,0.143411352204052,0.88424136911809,0,1.41904425628239,14.5664268355388,15.4768599691154,0,1.04980416073495,0.0962221127255121,0,0,0.470719003883896,0.86101074534246,1.68471475667626,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0,1.46508179271894,0,0,0,0,0.296964680832639,0,0,0,0.556543525114529,0,0,0.199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| |||
|short_description=p@chr17:38613071..38613097,+ | |||
}} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38613071..38613097, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613071..38613097, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.28e-15 | 58 |
myoblast | 5.28e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.28e-15 | 58 |
muscle cell | 6.30e-13 | 55 |
multi fate stem cell | 6.84e-13 | 427 |
fibroblast | 7.65e-13 | 76 |
somatic stem cell | 2.95e-12 | 433 |
smooth muscle cell | 6.48e-12 | 43 |
smooth muscle myoblast | 6.48e-12 | 43 |
stem cell | 1.92e-11 | 441 |
electrically responsive cell | 9.79e-11 | 61 |
electrically active cell | 9.79e-11 | 61 |
mesodermal cell | 5.19e-10 | 121 |
vascular associated smooth muscle cell | 2.00e-08 | 32 |
extracellular matrix secreting cell | 5.15e-07 | 15 |
stromal cell | 5.33e-07 | 28 |
fat cell | 7.78e-07 | 15 |
connective tissue cell | 8.56e-07 | 361 |