FFCP PHASE1:Hg19::chr17:67171837..67171845,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10349 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENST00000519732,uc010wqs.1_5end | |||
|cluster_id=chr17:67171837..67171845,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_3_at_ABCA10_5end | |||
|id=chr17:67171837..67171845,- | |||
|ontology_enrichment_celltype=CL:0002494!9.65e-09!16;CL:0000192!1.34e-08!42;CL:0000514!1.34e-08!42;CL:0002548!2.19e-08!6;CL:0002150!2.96e-07!3;CL:0000861!2.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000083;5.80e-10;4!CL:1001319;7.54e-10;1!CL:1000600;7.54e-10;1!CL:0002594;1.89e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,5.55e-10,4;CL:1001319,8.24e-10,1;CL:1000600,8.24e-10,1;CL:0002594,1.73e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.95e-16!14;DOID:305!4.27e-10!106;DOID:0050687!2.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.56e-15;14!DOID:6193;4.06e-10;1!DOID:1793;5.80e-10;4!DOID:3111;7.54e-10;1!DOID:3603;7.54e-10;1!DOID:170;6.46e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.38e-15,14;DOID:6193,4.06e-10,1;DOID:3111,5.30e-10,1;DOID:3603,5.30e-10,1;DOID:1793,5.55e-10,4;DOID:305,3.05e-08,106;DOID:170,6.27e-07,6;DOID:0050687,7.83e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001264!6.77e-11!10;UBERON:0003922!6.77e-11!10;UBERON:0003923!6.77e-11!10;UBERON:0003924!6.77e-11!10;UBERON:0003921!6.77e-11!10;UBERON:0002114!4.54e-10!12;UBERON:0001045!8.97e-10!11;UBERON:0003343!3.40e-09!4;UBERON:0004785!3.40e-09!4;UBERON:0002075!1.04e-08!18;UBERON:0002108!1.70e-08!14;UBERON:0003729!2.53e-07!5;UBERON:0004119!5.02e-07!169;UBERON:0000925!5.02e-07!169;UBERON:0006595!5.02e-07!169;UBERON:0004872!6.87e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;8.02e-32;10!UBERON:0002075;1.80e-23;18!UBERON:0003343;1.60e-20;4!UBERON:0004785;1.60e-20;4!UBERON:0000974;6.99e-14;6!UBERON:0000344;9.03e-11;20!UBERON:0004645;7.54e-10;1!UBERON:0001256;7.54e-10;1!UBERON:0001259;7.54e-10;1!UBERON:0001310;1.89e-09;4!UBERON:0002323;9.43e-09;45!UBERON:0000949;1.57e-08;43!UBERON:0004458;7.72e-07;48!UBERON:0002553;8.97e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,7.62e-32,10;UBERON:0002075,1.80e-23,18;UBERON:0003343,1.83e-20,4;UBERON:0004785,1.83e-20,4;UBERON:0002323,2.65e-11,46;UBERON:0000344,8.85e-11,20;UBERON:0004458,1.51e-10,49;UBERON:0004645,8.24e-10,1;UBERON:0001256,8.24e-10,1;UBERON:0001259,8.24e-10,1;UBERON:0001310,1.73e-09,4;UBERON:0003886,1.79e-09,54;UBERON:0000949,5.79e-09,45;UBERON:0000974,1.64e-08,10;UBERON:0002553,2.88e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0.264818361626438,0,0.709336764396714,0,1.06748995729705,0.24666754841716,0.311211035399766,1.48181739276657,0.163461903113459,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0,0,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.858749320451947,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0.48763373908959,0,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0,1.62328301570163,0,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,35.9314961710457,0,0,0,0,0.150323419414493,0,3.32326936353593,6.95083107338548,8.16225587858786,5.97362148864794,0,0.277349346026277,0,0.391969589657511,0,0,2.23581842213102,0.677294319023596,0.877071805034227,0.492692742319255,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0.686520205190771,0,0.15543720058278,1.03498604992744,0.63718706865481,0,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41664733254615,0.11796972334774,4.4022863645203,2.19498765685643,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,67.7863662901418,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,2.85686301769052,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38385556638657,0,0,4.94038611586228,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@ABCA10 | |||
}} |
Latest revision as of 01:05, 17 September 2015
Short description: | p3@ABCA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCA10_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 76bp_to_ENST00000519732, uc010wqs.1_5end |
EntrezGene: | ABCA10 |
HGNC: | 30 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 5.55e-10 | 4 |
bladder cell | 8.24e-10 | 1 |
lower urinary tract cell | 8.24e-10 | 1 |
smooth muscle cell of the umbilical artery | 1.73e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas | 7.62e-32 | 10 |
viscus | 1.80e-23 | 18 |
mucosa of oral region | 1.83e-20 | 4 |
respiratory system mucosa | 1.83e-20 | 4 |
body cavity | 2.65e-11 | 46 |
mucosa | 8.85e-11 | 20 |
body cavity or lining | 1.51e-10 | 49 |
urinary bladder urothelium | 8.24e-10 | 1 |
wall of urinary bladder | 8.24e-10 | 1 |
mucosa of urinary bladder | 8.24e-10 | 1 |
umbilical artery | 1.73e-09 | 4 |
body cavity precursor | 1.79e-09 | 54 |
endocrine system | 5.79e-09 | 45 |
neck | 1.64e-08 | 10 |
anatomical cavity | 2.88e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.38e-15 | 14 |
epithelioid sarcoma | 4.06e-10 | 1 |
cystadenocarcinoma | 5.30e-10 | 1 |
mucinous cystadenocarcinoma | 5.30e-10 | 1 |
pancreatic cancer | 5.55e-10 | 4 |
carcinoma | 3.05e-08 | 106 |
endocrine gland cancer | 6.27e-07 | 6 |
cell type cancer | 7.83e-07 | 143 |