FFCP PHASE1:Hg19::chr8:71316021..71316068,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:71316021..71316068,-
|short_description=p1@NCOA2
|description=CAGE_peak_1_at_NCOA2_5end
|association_with_transcript=0bp_to_ENST00000452400_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10499 | |EntrezGene=10499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |HGNC=7669 | ||
|TSSclassifier=strong | |||
|UniProt=Q15596 | |UniProt=Q15596 | ||
|association_with_transcript=0bp_to_ENST00000452400_5end | |||
|cluster_id=chr8:71316021..71316068,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_NCOA2_5end | |||
|id=chr8:71316021..71316068,- | |||
|ontology_enrichment_celltype=CL:0000738!3.86e-21!140;CL:0000037!6.33e-20!172;CL:0000566!6.33e-20!172;CL:0002032!3.52e-18!165;CL:0000837!3.52e-18!165;CL:0002031!9.38e-17!124;CL:0002087!1.48e-16!119;CL:0000988!3.17e-16!182;CL:0002057!6.11e-15!42;CL:0000766!3.21e-14!76;CL:0000860!1.79e-12!45;CL:0000763!5.99e-12!112;CL:0000049!5.99e-12!112;CL:0000839!4.61e-11!70;CL:0000791!2.86e-10!18;CL:0000789!2.86e-10!18;CL:0002420!2.86e-10!18;CL:0002419!2.86e-10!18;CL:0000790!2.86e-10!18;CL:0000557!4.14e-10!71;CL:0002194!1.36e-09!63;CL:0000576!1.36e-09!63;CL:0000040!1.36e-09!63;CL:0000559!1.36e-09!63;CL:0002009!3.32e-09!65;CL:0000625!5.33e-07!11;CL:0000838!8.85e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.68e-10;18!CL:0000789;2.68e-10;18!CL:0002419;2.68e-10;18!CL:0000576;8.18e-10;48!CL:0000860;2.04e-09;33!CL:0002057;2.04e-09;33!CL:0000766;1.48e-08;69!CL:0000473;1.63e-07;39!CL:0000234;1.63e-07;39!CL:0002087;2.78e-07;104!CL:0000625;5.15e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.15e-23,136;CL:0000037,1.37e-21,168;CL:0002032,8.66e-20,161;CL:0000837,8.66e-20,161;CL:0002031,1.40e-18,120;CL:0002087,2.04e-18,115;CL:0000988,3.15e-18,177;CL:0000766,1.78e-16,72;CL:0000860,6.11e-15,42;CL:0002057,6.11e-15,42;CL:0000473,6.40e-14,48;CL:0000234,6.40e-14,48;CL:0000763,1.69e-13,108;CL:0000049,1.69e-13,108;CL:0000839,4.60e-13,66;CL:0000557,5.72e-12,67;CL:0002194,1.55e-11,59;CL:0000576,1.55e-11,59;CL:0000040,1.55e-11,59;CL:0000559,1.55e-11,59;CL:0002009,4.73e-11,61;CL:0000791,2.86e-10,18;CL:0000789,2.86e-10,18;CL:0002420,2.86e-10,18;CL:0002419,2.86e-10,18;CL:0000790,2.86e-10,18;CL:0000625,5.32e-07,11;CL:0000838,8.85e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;6.12e-11;42!CL:0000790;2.68e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-26!115;UBERON:0002390!4.43e-14!102;UBERON:0003061!4.43e-14!102;UBERON:0002193!3.79e-11!112;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0003080!1.90e-08!42;UBERON:0002371!2.75e-08!80;UBERON:0001474!4.09e-08!86;UBERON:0002780!4.36e-08!41;UBERON:0001890!4.36e-08!41;UBERON:0006240!4.36e-08!41;UBERON:0002616!1.42e-07!59;UBERON:0001017!2.16e-07!82;UBERON:0004765!3.04e-07!101;UBERON:0001434!3.04e-07!101;UBERON:0000955!3.48e-07!69;UBERON:0006238!3.48e-07!69;UBERON:0001893!4.91e-07!34;UBERON:0002020!5.82e-07!34;UBERON:0003528!5.82e-07!34;UBERON:0002791!5.88e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.70e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-26,114;UBERON:0002390,6.23e-16,98;UBERON:0003061,6.23e-16,98;UBERON:0002193,1.22e-12,108;UBERON:0002371,8.63e-10,76;UBERON:0001474,1.57e-09,82;UBERON:0002405,1.14e-08,93;UBERON:0001434,2.90e-08,100;UBERON:0001049,3.12e-08,56;UBERON:0005068,3.12e-08,56;UBERON:0006241,3.12e-08,56;UBERON:0007135,3.12e-08,56;UBERON:0004765,3.68e-08,90;UBERON:0002780,4.36e-08,41;UBERON:0001890,4.36e-08,41;UBERON:0003080,4.36e-08,41;UBERON:0006240,4.36e-08,41;UBERON:0000073,8.93e-08,53;UBERON:0002616,8.93e-08,53;UBERON:0001017,4.14e-07,81;UBERON:0001893,4.91e-07,34;UBERON:0003528,5.82e-07,34;UBERON:0002020,5.82e-07,34;UBERON:0000955,6.84e-07,68;UBERON:0006238,6.84e-07,68;UBERON:0002791,8.47e-07,32 | |||
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| ||
|short_description=p1@NCOA2 | |||
}} | }} |
Latest revision as of 00:11, 19 September 2015
Short description: | p1@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCOA2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000452400_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | Q15596 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.15e-23 | 136 |
hematopoietic stem cell | 1.37e-21 | 168 |
hematopoietic oligopotent progenitor cell | 8.66e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.66e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 1.40e-18 | 120 |
nongranular leukocyte | 2.04e-18 | 115 |
hematopoietic cell | 3.15e-18 | 177 |
myeloid leukocyte | 1.78e-16 | 72 |
classical monocyte | 6.11e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.11e-15 | 42 |
defensive cell | 6.40e-14 | 48 |
phagocyte | 6.40e-14 | 48 |
myeloid cell | 1.69e-13 | 108 |
common myeloid progenitor | 1.69e-13 | 108 |
myeloid lineage restricted progenitor cell | 4.60e-13 | 66 |
granulocyte monocyte progenitor cell | 5.72e-12 | 67 |
monopoietic cell | 1.55e-11 | 59 |
monocyte | 1.55e-11 | 59 |
monoblast | 1.55e-11 | 59 |
promonocyte | 1.55e-11 | 59 |
macrophage dendritic cell progenitor | 4.73e-11 | 61 |
mature alpha-beta T cell | 2.86e-10 | 18 |
alpha-beta T cell | 2.86e-10 | 18 |
immature T cell | 2.86e-10 | 18 |
mature T cell | 2.86e-10 | 18 |
immature alpha-beta T cell | 2.86e-10 | 18 |
CD8-positive, alpha-beta T cell | 5.32e-07 | 11 |
lymphoid lineage restricted progenitor cell | 8.85e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-26 | 114 |
hematopoietic system | 6.23e-16 | 98 |
blood island | 6.23e-16 | 98 |
hemolymphoid system | 1.22e-12 | 108 |
bone marrow | 8.63e-10 | 76 |
bone element | 1.57e-09 | 82 |
immune system | 1.14e-08 | 93 |
skeletal system | 2.90e-08 | 100 |
neural tube | 3.12e-08 | 56 |
neural rod | 3.12e-08 | 56 |
future spinal cord | 3.12e-08 | 56 |
neural keel | 3.12e-08 | 56 |
skeletal element | 3.68e-08 | 90 |
regional part of forebrain | 4.36e-08 | 41 |
forebrain | 4.36e-08 | 41 |
anterior neural tube | 4.36e-08 | 41 |
future forebrain | 4.36e-08 | 41 |
regional part of nervous system | 8.93e-08 | 53 |
regional part of brain | 8.93e-08 | 53 |
central nervous system | 4.14e-07 | 81 |
telencephalon | 4.91e-07 | 34 |
brain grey matter | 5.82e-07 | 34 |
gray matter | 5.82e-07 | 34 |
brain | 6.84e-07 | 68 |
future brain | 6.84e-07 | 68 |
regional part of telencephalon | 8.47e-07 | 32 |