FFCP PHASE1:Hg19::chr8:72756522..72756533,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:72756522..72756533,-
|short_description=p13@MSC
|description=CAGE_peak_13_at_MSC_5end
|association_with_transcript=169bp_to_ENST00000325509_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9242 | |EntrezGene=9242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |HGNC=7321 | ||
|TSSclassifier=strong | |||
|UniProt=O60682 | |UniProt=O60682 | ||
|association_with_transcript=169bp_to_ENST00000325509_5end | |||
|cluster_id=chr8:72756522..72756533,- | |||
|description=CAGE_peak_13_at_MSC_5end | |||
|id=chr8:72756522..72756533,- | |||
|ontology_enrichment_celltype=CL:0000219!1.92e-10!390;CL:0000055!1.45e-09!180;CL:0000057!2.23e-09!75;CL:0002334!1.10e-07!12;CL:0000034!1.96e-07!444;CL:0000723!2.10e-07!436;CL:0000134!5.34e-07!358;CL:0000048!5.62e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002567;4.61e-15;3!CL:0000148;9.05e-12;10!CL:1000306;2.62e-10;4!CL:0002547;2.62e-10;4!CL:0000147;2.64e-08;14!CL:0002579;2.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.45e-15,3;CL:0000148,8.73e-12,10;CL:0000541,8.73e-12,10;CL:1000306,4.71e-10,4;CL:0002547,4.71e-10,4;CL:0000333,7.93e-09,41;CL:0000147,2.58e-08,14;CL:0002579,2.75e-07,3;CL:0000057,5.73e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.53e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.48e-12;6!UBERON:0002358;2.48e-12;6!UBERON:0003684;2.48e-12;6!UBERON:0001178;2.48e-12;6!UBERON:0004797;2.62e-10;4!UBERON:0000415;2.62e-10;4!UBERON:0007240;2.62e-10;4!UBERON:0005742;2.62e-10;4!UBERON:0005734;2.62e-10;4!UBERON:0004664;2.62e-10;4!UBERON:0004663;2.62e-10;4!UBERON:0004457;3.08e-08;9!UBERON:0000042;3.08e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.55e-12,6;UBERON:0002358,3.55e-12,6;UBERON:0003684,3.55e-12,6;UBERON:0001178,3.55e-12,6;UBERON:0000415,4.71e-10,4;UBERON:0007240,4.71e-10,4;UBERON:0005742,4.71e-10,4;UBERON:0005734,4.71e-10,4;UBERON:0004664,4.71e-10,4;UBERON:0004663,4.71e-10,4 | |||
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|phase1_expression=0,0.642301571672949,1.40954404095971,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.57470412614962,0.472264687882075,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.290796477559129,0,0,0.464858073811369,2.05583944010913,0,0.28769239232215,0,0.945928919554341,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0.898893937780338,0,0,0,0,0.199463657621632,0,1.45104619314292,0.56738522469114,0,0.502497330513487,0,0.434377689410233,1.21079900526674,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0,0,0,1.29818957461873,0.696518949197069,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0.529636723252875,1.43418310374407,1.06400514659507,0,1.06748995729705,0.98667019366864,0,0.67355336034844,0.326923806226917,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0,0,0,0,0,0,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0,0,0,0,0,1.50238058906597,0.340296549480063,0,0.640672166455702,0.423863802319124,0,0,0,0.18611685633159,0,0.389748020644795,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0,0,0,0,0,0,0,0,0,0,0,0,5.20682733195786,2.67391897890794,5.86087236050235,6.84289784090821,0.822619941626588,0,2.85826432630578,0,0,0,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0.958499421966331,0,0,0,0,0,0.336255431980582,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,1.12264037773229,3.07533958213682,0,3.05622450172854,1.48418066444991,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.574072240823034,0,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,1.6068392984416,1.16004861950546,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.255679882248303,1.4245125703478,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,1.28812398067792,0,0,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,4.21585606633904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.881747022766871,0,0,0,0,0,0,0,0,0,0,1.22397861163586,2.88950589901519,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.226624183040251,0,0,0,0,0.513260513652988,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0.468334905806882,0.144921028610825,0.298509605773748,2.10341978862502,0.554805861502613,0,0,0,2.05956061557231,0.453692771289717,0.466311601748341,1.33069634990671,0,0.899606224327209,0.621051827505038,0,0.53168342911599,0.521745061811734,0.601030435988874,0,0,0.363697318405119,1.39633724155235,0.928067519756987,0,0,0,0.336749488765919,1.26184898228651,0,0,0.521988583930423,0.453411851024545,0,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0,0.194860308839388,0,0,0.655219697692825,0,0,0.999936979274649,0,0,0,0.368211900503681,0,0.622077260032973,0.127894371303652,0,1.41539347670307,0,0,0,3.71807292777007,0,0.954013051960256,0,0,0,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.399764623699716,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.2012737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| ||
|short_description=p13@MSC | |||
}} | }} |
Latest revision as of 01:11, 19 September 2015
Short description: | p13@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MSC_5end |
Coexpression cluster: | NA |
Association with transcript: | 169bp_to_ENST00000325509_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | O60682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.45e-15 | 3 |
melanocyte | 8.73e-12 | 10 |
melanoblast | 8.73e-12 | 10 |
fibroblast of tunica adventitia of artery | 4.71e-10 | 4 |
fibroblast of the aortic adventitia | 4.71e-10 | 4 |
migratory neural crest cell | 7.93e-09 | 41 |
pigment cell | 2.58e-08 | 14 |
omentum preadipocyte | 2.75e-07 | 3 |
fibroblast | 5.73e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.55e-12 | 6 |
peritoneum | 3.55e-12 | 6 |
abdominal cavity | 3.55e-12 | 6 |
visceral peritoneum | 3.55e-12 | 6 |
artery wall | 4.71e-10 | 4 |
tunica adventitia of artery | 4.71e-10 | 4 |
adventitia | 4.71e-10 | 4 |
tunica adventitia of blood vessel | 4.71e-10 | 4 |
aorta tunica adventitia | 4.71e-10 | 4 |
aorta wall | 4.71e-10 | 4 |