FFCP PHASE1:Hg19::chr1:145075847..145075982,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=strong | |||
|UniProt=F8WAP3,E9PPE8,E9PJ64 | |||
|association_with_transcript=0bp_to_ENST00000369359,ENST00000528661,ENST00000530740,ENST00000533396_5end | |||
|cluster_id=chr1:145075847..145075982,- | |||
|coexpression_cluster_id=C3858 | |||
|description=CAGE_peak_4_at_PDE4DIP_5end | |||
|id=chr1:145075847..145075982,- | |||
|ontology_enrichment_celltype=CL:0000055!3.12e-29!180;CL:0000057!6.98e-20!75;CL:0000680!5.38e-11!57;CL:0000056!5.38e-11!57;CL:0000355!5.38e-11!57;CL:0000187!1.18e-09!54;CL:0000183!9.87e-09!59;CL:0002620!4.73e-08!23;CL:0000393!5.90e-08!60;CL:0000211!5.90e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.03e-08;23!CL:0000057;3.55e-08;73!CL:0000134;1.26e-07;55!CL:0002334;4.03e-07;12!CL:0000723;5.28e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.01e-20,76;CL:0000680,2.06e-11,58;CL:0000056,2.06e-11,58;CL:0000355,2.06e-11,58;CL:0000187,5.49e-10,55;CL:0002620,2.97e-08,23;CL:0000393,3.96e-08,61;CL:0000211,3.96e-08,61;CL:0002334,4.36e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;8.75e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.87e-21!365;UBERON:0002616!2.85e-18!59;UBERON:0001049!1.19e-17!57;UBERON:0005068!1.19e-17!57;UBERON:0006241!1.19e-17!57;UBERON:0007135!1.19e-17!57;UBERON:0000955!1.74e-17!69;UBERON:0006238!1.74e-17!69;UBERON:0000033!5.14e-17!123;UBERON:0000073!7.85e-17!94;UBERON:0001016!7.85e-17!94;UBERON:0002346!4.38e-16!90;UBERON:0001017!1.23e-15!82;UBERON:0003075!1.46e-15!86;UBERON:0007284!1.46e-15!86;UBERON:0000914!3.01e-15!83;UBERON:0002329!3.01e-15!83;UBERON:0003077!3.01e-15!83;UBERON:0003059!3.01e-15!83;UBERON:0007282!3.01e-15!83;UBERON:0009618!3.01e-15!83;UBERON:0007285!3.01e-15!83;UBERON:0000153!3.71e-15!129;UBERON:0007811!3.71e-15!129;UBERON:0000924!4.83e-15!173;UBERON:0006601!4.83e-15!173;UBERON:0005743!5.91e-15!86;UBERON:0004121!1.76e-14!169;UBERON:0003080!2.36e-14!42;UBERON:0001893!2.99e-14!34;UBERON:0000468!3.87e-14!659;UBERON:0002780!4.25e-14!41;UBERON:0001890!4.25e-14!41;UBERON:0006240!4.25e-14!41;UBERON:0001869!4.26e-14!32;UBERON:0002020!6.69e-14!34;UBERON:0003528!6.69e-14!34;UBERON:0002791!1.22e-13!33;UBERON:0002619!4.69e-13!22;UBERON:0004290!1.46e-12!70;UBERON:0000486!2.07e-12!82;UBERON:0001950!3.14e-12!20;UBERON:0000956!8.42e-12!25;UBERON:0000203!8.42e-12!25;UBERON:0003056!1.12e-11!61;UBERON:0000119!4.70e-11!312;UBERON:0000483!7.35e-11!309;UBERON:0001134!1.36e-10!61;UBERON:0002036!1.36e-10!61;UBERON:0003082!1.36e-10!61;UBERON:0000481!1.61e-10!347;UBERON:0002385!2.40e-10!63;UBERON:0001015!2.40e-10!63;UBERON:0000383!2.40e-10!63;UBERON:0000467!2.96e-10!625;UBERON:0000480!4.93e-10!626;UBERON:0002050!2.80e-09!605;UBERON:0005423!2.80e-09!605;UBERON:0000923!3.80e-09!604;UBERON:0005291!3.80e-09!604;UBERON:0006598!3.80e-09!604;UBERON:0002532!3.80e-09!604;UBERON:0000922!6.52e-09!612;UBERON:0007023!6.59e-08!115;UBERON:0000062!2.69e-07!511;UBERON:0005256!4.90e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.44e-14;22!UBERON:0001869;2.27e-13;32!UBERON:0001950;3.48e-13;20!UBERON:0001893;4.21e-13;34!UBERON:0002791;6.45e-13;32!UBERON:0003528;8.65e-13;34!UBERON:0002020;8.65e-13;34!UBERON:0000956;2.14e-12;25!UBERON:0000203;2.14e-12;25!UBERON:0002780;1.02e-10;41!UBERON:0001890;1.02e-10;41!UBERON:0000073;4.54e-10;53!UBERON:0002616;4.54e-10;53!UBERON:0001017;1.23e-08;75!UBERON:0000955;4.24e-08;68!UBERON:0001016;6.55e-08;83!UBERON:0002385;3.11e-07;31!UBERON:0001015;3.11e-07;31!UBERON:0000383;3.11e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.87e-20,132;UBERON:0001049,2.33e-17,56;UBERON:0005068,2.33e-17,56;UBERON:0006241,2.33e-17,56;UBERON:0007135,2.33e-17,56;UBERON:0000955,3.98e-17,68;UBERON:0006238,3.98e-17,68;UBERON:0001016,4.80e-17,89;UBERON:0000073,7.24e-17,53;UBERON:0002616,7.24e-17,53;UBERON:0001017,4.88e-15,81;UBERON:0001893,6.54e-15,34;UBERON:0001869,9.76e-15,32;UBERON:0002346,1.05e-14,86;UBERON:0003528,1.54e-14,34;UBERON:0002020,1.54e-14,34;UBERON:0004121,3.01e-14,171;UBERON:0000924,3.01e-14,171;UBERON:0006601,3.01e-14,171;UBERON:0002780,3.26e-14,41;UBERON:0001890,3.26e-14,41;UBERON:0003080,3.26e-14,41;UBERON:0006240,3.26e-14,41;UBERON:0003075,3.82e-14,82;UBERON:0007284,3.82e-14,82;UBERON:0002791,3.94e-14,32;UBERON:0002619,5.39e-14,22;UBERON:0003077,1.98e-13,72;UBERON:0007285,1.98e-13,72;UBERON:0007524,2.89e-13,73;UBERON:0001950,4.21e-13,20;UBERON:0002329,5.96e-13,71;UBERON:0003059,5.96e-13,71;UBERON:0007282,5.96e-13,71;UBERON:0004290,5.96e-13,71;UBERON:0009618,5.96e-13,71;UBERON:0000956,3.01e-12,25;UBERON:0000203,3.01e-12,25;UBERON:0000486,4.59e-12,83;UBERON:0010371,7.22e-12,104;UBERON:0003056,5.61e-11,61;UBERON:0001134,9.81e-11,62;UBERON:0002036,9.81e-11,62;UBERON:0003082,9.81e-11,62;UBERON:0007503,1.34e-10,78;UBERON:0002385,3.40e-10,64;UBERON:0001015,3.40e-10,64;UBERON:0000383,3.40e-10,64;UBERON:0000119,6.23e-08,309;UBERON:0000483,9.29e-08,306;UBERON:0002199,1.80e-07,46;UBERON:0002416,1.80e-07,46;UBERON:0002050,2.05e-07,564;UBERON:0000923,5.16e-07,560;UBERON:0010316,5.16e-07,560;UBERON:0005291,5.16e-07,560;UBERON:0006598,5.16e-07,560;UBERON:0010317,5.16e-07,560;UBERON:0002532,5.16e-07,560;UBERON:0005423,5.39e-07,581;UBERON:0003102,5.94e-07,99 | |||
|phase1_expression=78.8484166034216,20.9818513413163,19.8745709775319,24.0175916047513,10.7270662662549,11.3404008133048,7.59899634504932,9.47579810140246,7.57438321779532,0.491467873003018,0.697801167972428,0,0.263766978228454,8.53987835424322,8.61633176892581,4.70627602516243,7.23233433628772,9.49403117503585,4.39139518911456,5.54044761345546,2.44800829493104,0.940364164434263,0.572471974262113,1.23186982565596,2.25976751270645,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,18.1371534134339,7.12566065241755,28.0757368721263,0.581592955118259,0.377875943688809,0.485168122375632,1.85943229524548,2.05583944010913,0.929119112685311,0.863077176966451,0.768482119587302,0,1.03423704220986,0.645484683583826,1.35426486594342,2.63539275359647,3.547779950752,1.34834090667051,2.44867113896722,0.641858054152187,0,0,0,0,1.45104619314292,1.70215567407342,3.11411124497787,0.502497330513487,0.521482918420201,0.434377689410233,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,13.4140171940727,3.06870148424473,6.14446559053763,13.536123587169,10.5737958841401,3.1811437882044,1.94653948121054,1.03988298880475,1.99556457716308,1.40535657109002,6.54895377488563,0.364295288292542,0.370784442784429,2.27183175558278,1.56716763569341,1.46253756570752,0,0,0,0,10.3228151412735,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0,1.10298924103761,0,0.625098097988558,0.673588117878509,2.92789849256638,0,0.949265659568129,0,0,0,1.3082821564276,19.8788780678127,1.77282716330412,76.1352789676008,10.3261183469573,6.73869926176878,4.48542080113846,2.1349799145941,0.74000264525148,10.2699641681923,7.13966561969347,7.02886183387873,1.96764655938411,2.30470369792,6.09235722767871,36.8348890659778,34.7987811142114,36.3160293740877,11.6260153657327,7.93177427403845,4.6348766211742,22.6611130092932,7.37005903870608,21.4917624845592,16.6320400019487,17.308685049499,12.7422590671324,10.7792721272436,6.22843621630045,4.50426671539071,22.4421933542188,6.58466431321257,14.0984386067549,23.8878513661489,1.58805056424029,13.8130019480424,6.40672166455702,10.3846631568185,7.50227740211006,4.01904864029912,32.2050675057036,10.422543954569,14.3459882405076,5.65134629934952,46.195380686673,28.1672689845436,10.1837015795851,7.4552014428489,3.52632343796741,8.47802961552438,5.60456474173561,3.27295344709002,3.72845974005705,0.487894824518382,0.132529768321485,0.69716365721711,0.518305275076852,0,0.72995471815166,7.8224766164908,9.64861407289328,0,25.5402360417588,15.8813485967309,0,0,0,0,0,0,0,0,0,0,1.40241773803446,5.3504621473082,8.82052268313252,0,0,0.590789906681404,0,0,1.3725424823882,0.658501712451753,0,1.00528972411631,1.01847289674383,2.93227474779292,7.27954349695705,2.88662684050547,1.62302566965108,0.939269553886573,0.433099343283221,0,0,0,1.71697232418975,3.20082107913617,4.68008530278475,15.7549032026052,2.81201501960331,4.53551746136921,4.11147782002921,2.50763863567975,0.581267877027924,0.766765358330422,0,0,0,0,0.25248486685276,2.92090313743978,6.11181480893244,14.0660936652056,5.13217338068116,2.46785982487976,0.600686115687835,2.85826432630578,1.56983518083505,5.66748089483264,2.2001485746285,3.87815147273333,42.9187735022259,8.45302752556,10.3715865468099,13.5209667984776,12.0887465903207,4.25547396069835,6.92697665441858,2.57360388584666,3.25572963234866,11.5253647149308,12.0522388188682,1.77695974371273,7.91951872933429,8.13886318060882,21.7883364650074,44.2880350936513,2.43247561282381,5.02257091432126,16.8667151586425,2.63587341040741,2.29723871668228,2.85273810081437,41.8417976269304,32.8762116080613,15.2201818753911,0,0,0,0,0.254094624222463,1.30139853857622,0,2.01019518401218,1.91381625495949,0,0,0,6.25726607767613,12.0040925054323,4.88277042659524,3.53550464602372,9.63516539504674,19.23969463414,0.819989904948992,4.51419149591578,2.27407504055985,6.2083842775503,1.99267679560631,3.50301420229236,18.4193262672336,1.76221041716467,0.343143423810856,0,0,0,0.303127571446259,0,1.20956117331872,74.1842345378143,37.5981834555753,26.1013887822758,27.0373604929529,34.2843856874691,14.6377068240683,7.42090332224955,15.1125499926602,16.3356787288077,22.6670950598113,4.15403543346897,12.8993520090555,0,0.802025881213139,0.184161977871793,4.93702127107809,2.54927635209404,9.30983346211911,0,1.15523005656622,0.784349769176855,2.92278449306521,2.32213583564327,0,0,0.863663664408557,0,1.89662506280697,2.50844886927427,0.764628819135115,0,0.447749509444357,0,0,0.769350375349168,0,2.60302715731442,1.13345112812495,3.47963966309705,4.45551299571175,6.3169209179579,3.25030123018261,3.21367859688319,8.41035249141461,45.5983906659347,27.1701504265249,22.329524742494,73.6902879796357,32.6287561307014,42.3576338258021,3.29418531892928,0.330569830721956,2.30628080838127,13.3993348119313,1.11273558941105,4.183609943675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| |||
|short_description=p4@PDE4DIP | |||
}} |
Latest revision as of 17:13, 16 September 2015
Short description: | p4@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDE4DIP_5end |
Coexpression cluster: | C3858_cerebellum_Skeletal_Fibroblast_myxofibrosarcoma_Preadipocyte_Adipocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000369359, ENST00000528661, ENST00000530740, ENST00000533396_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | F8WAP3E9PPE8E9PJ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.01e-20 | 76 |
muscle precursor cell | 2.06e-11 | 58 |
myoblast | 2.06e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.06e-11 | 58 |
muscle cell | 5.49e-10 | 55 |
skin fibroblast | 2.97e-08 | 23 |
electrically responsive cell | 3.96e-08 | 61 |
electrically active cell | 3.96e-08 | 61 |
preadipocyte | 4.36e-07 | 12 |