FFCP PHASE1:Hg19::chr1:158979872..158979898,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPR3 | |||
|association_with_transcript=72bp_to_ENST00000430894_5end | |||
|cluster_id=chr1:158979872..158979898,+ | |||
|coexpression_cluster_id=C3886 | |||
|description=CAGE_peak_3_at_IFI16_5end | |||
|id=chr1:158979872..158979898,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-21!42;CL:0000860!8.26e-20!45;CL:0002194!2.03e-18!63;CL:0000576!2.03e-18!63;CL:0000040!2.03e-18!63;CL:0000559!2.03e-18!63;CL:0000766!2.39e-18!76;CL:0002009!4.56e-17!65;CL:0000557!8.72e-16!71;CL:0000839!1.14e-15!70;CL:0000048!1.91e-08!430;CL:0000723!2.30e-08!436;CL:0000034!3.87e-07!444;CL:0000055!4.51e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.48e-19;33!CL:0002057;4.48e-19;33!CL:0000473;6.09e-17;39!CL:0000234;6.09e-17;39!CL:0000576;5.73e-14;48!CL:0000766;2.65e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.25e-24,48;CL:0000234,8.25e-24,48;CL:0000860,8.25e-23,42;CL:0002057,8.25e-23,42;CL:0002194,1.85e-21,59;CL:0000576,1.85e-21,59;CL:0000040,1.85e-21,59;CL:0000559,1.85e-21,59;CL:0000766,6.42e-21,72;CL:0002009,9.64e-20,61;CL:0000839,1.74e-18,66;CL:0000557,3.75e-18,67;CL:0000723,8.89e-10,433;CL:0000048,9.72e-10,427;CL:0000034,1.39e-08,441;CL:0000763,3.00e-07,108;CL:0000049,3.00e-07,108;CL:0000057,5.08e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.12e-21!167;UBERON:0002390!2.36e-18!102;UBERON:0003061!2.36e-18!102;UBERON:0002193!1.23e-16!112;UBERON:0002371!1.34e-16!80;UBERON:0004765!3.17e-16!101;UBERON:0001434!3.17e-16!101;UBERON:0001474!3.55e-15!86;UBERON:0003081!1.69e-11!216;UBERON:0002405!1.11e-09!115;UBERON:0000467!6.89e-09!625;UBERON:0000926!7.37e-09!448;UBERON:0004120!7.37e-09!448;UBERON:0006603!7.37e-09!448;UBERON:0000480!1.20e-08!626;UBERON:0000468!3.15e-08!659;UBERON:0000923!7.01e-07!604;UBERON:0005291!7.01e-07!604;UBERON:0006598!7.01e-07!604;UBERON:0002532!7.01e-07!604;UBERON:0002050!7.10e-07!605;UBERON:0005423!7.10e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.26e-23,167;UBERON:0002390,1.09e-19,98;UBERON:0003061,1.09e-19,98;UBERON:0004765,1.72e-19,90;UBERON:0001434,8.35e-19,100;UBERON:0002371,1.75e-18,76;UBERON:0002193,6.01e-18,108;UBERON:0000926,7.08e-18,315;UBERON:0004120,7.08e-18,315;UBERON:0006603,7.08e-18,315;UBERON:0001474,4.37e-17,82;UBERON:0002405,5.04e-15,93;UBERON:0003081,2.46e-14,203;UBERON:0002050,1.25e-08,564;UBERON:0000923,5.54e-08,560;UBERON:0010316,5.54e-08,560;UBERON:0005291,5.54e-08,560;UBERON:0006598,5.54e-08,560;UBERON:0010317,5.54e-08,560;UBERON:0002532,5.54e-08,560 | |||
|phase1_expression=8.72056220498672,4.06790995392868,10.4306259031019,0,2.23480547213644,3.48935409640147,0,10.1075179748293,1.82829939739887,0.491467873003018,0,0,0,17.0797567084864,5.30235801164665,9.41255205032485,6.02694528023977,4.38186054232424,8.78279037822912,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0.821246550437305,0.125542639594803,0.382067028739756,0.246301768349837,0.157421562627358,2.36018566109342,0.383829398097213,1.08371286321253,1.83884244895785,0.30120591877825,1.84877005083394,0.154934401160603,0.284338464974843,0.587200878669695,2.76997704265939,1.40381113229099,3.47217393145363,14.5545058255951,7.44955431843653,11.8484761111726,25.4446917864238,21.5389287902621,19.1641408338375,11.6214518452842,11.1015329765893,13.6270803193846,105.583107982229,103.488925437757,155.605307266689,14.1345729102014,15.4916324060118,14.8969135253776,12.8004790888971,14.4640259530658,15.2811969422658,46.2186677480063,31.7719736805333,24.2948107803636,96.3165796545211,119.079803600114,92.0645461150619,47.5943151350878,9.64554881974938,14.3249117268982,108.0369260604,88.130613213014,174.402642298209,51.4589577238363,37.5643188707316,48.4187452784553,20.9142733448822,14.882300997553,17.820984868212,20.5561394998086,24.4788335331655,37.2883361137226,10.2604587746849,16.9079175619227,19.5450644528158,0,0,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0.954053754535364,0,0,0.382273228125229,1.32171328579026,1.12101712596307,0.790152254325231,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.668462741311041,0,0.443067789167242,0.270803863765016,0.128091319725675,0.520237390239513,0.657751618414705,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,1.95747654801105,0.76791966692651,0,2.13099526839615,0,0.201606743224732,0,0.289648807765598,41.4471672733735,7.37770945674,9.33396701457771,2.53007406669196,1.00267582127178,2.89693037921647,0,0.486634870302636,0.0945348171640679,0,0.527008714158756,0.261958150995425,0.728590576585084,1.48313777113772,9.41187441598582,13.2338600347443,8.64226743372624,0,0,0.371457501329565,1.98762407366705,1.72046919021225,0.347140501607594,0.56530794192401,3.77549492588915,4.40188867104108,0.417989933073621,1.03366703667732,1.42306505074684,2.00832367658802,0.402829317109147,1.52054421143703,0,4.04429388380456,0,2.50039239195423,1.57170560838319,2.13961812918312,0,0,1.09921046358244,17.1314542666882,23.2668158488995,0.872188104285069,8.44852317882041,18.6146852146932,32.8374768416783,34.1335578691088,12.4133933769425,3.92474320099615,1.06748995729705,3.94668077467456,14.626918663789,12.1239604862719,9.64425228369407,1.51357427644931,0.576175924479999,2.57753575017176,2.80944069147288,1.71141546463335,7.02408798593465,1.76151747965647,1.61872944368132,0.842704840213491,7.55370433643105,0.61417158655884,10.7458812422796,10.6920257155385,3.70900393917835,0,0,1.85169725349473,1.12606667884768,2.77064115484183,5.70670907145089,3.37136575378922,5.55880817954408,13.3849976128825,7.5343646989322,8.11518077510556,11.2323907614568,5.70173082560364,16.7975622658655,10.5632621418708,5.21127197728451,9.78902726999344,13.251432701923,14.8935926804028,10.6777882425067,9.37547129549109,8.16522062788213,4.63459651847145,2.88253006927829,8.31021668602176,12.2735754265876,14.6270343648392,0,0,0,0,0,0,0,1.92972281457866,0,20.8965567614391,10.8281922250438,0.709840800239063,0.505754070234305,0.241011029883482,0.55146986366197,1.08939722046203,0.474541238222193,0.674156540800822,0.588664395376038,0.769494313892781,0,0,0,0,0,1.96565443335525,0,0.882926198829301,0,7.03428022223955,2.74375713521564,4.49607013030478,2.11110842064425,14.9067396705233,1.95484983186195,0,0,0.115930404975077,5.16598254637615,3.3204282985047,4.1668696131895,5.70762456703795,0,0,19.204926474817,3.97807250736704,10.7014436847884,9.3733833986777,8.7350706663407,21.8333649753275,11.9112835194788,9.00965209393282,0.383382679165211,6.40462209264727,1.05658120815871,1.65862492432618,1.44119953416961,1.00993946741104,1.52394946301206,3.05590740446622,0,1.71072446022705,0.925447434329912,1.50171528921959,0.857479297891735,1.00917975910825,0.87192013766656,3.3735611477637,13.5735301545667,0,11.834238535784,3.19125739901845,2.08014873822732,2.31486636835928,1.41849132023278,0.532844358032199,11.7241954799681,4.34097284313154,1.64648067356154,11.7265026345745,7.10783897485092,4.75171123760058,10.2489388200259,2.61460037580088,5.99837947092342,7.29742683847143,13.0586843772353,2.10833939483032,6.23024624278115,3.44585807502342,12.8373214536647,5.06734573336527,6.78071864416265,5.72995082367666,4.48340575974109,0.197030760201927,0,0.513372145118994,0.254094624222463,0,0.773288812777695,1.50764638800914,0,26.2152458381514,2.99161459204025,72.1082993378702,7.60687248658667,8.00272833695483,7.5954206635926,6.03115498439341,6.24501460790066,4.1002627908823,4.09994952474496,4.8151375956435,9.09630016223939,3.10419213877515,5.31380478828349,1.10621501125022,8.25394337446787,0.195801157462741,0.343143423810856,1.6541442089831,2.15714200818617,1.60091336705167,0,0,0.907170879989041,9.92431231275107,16.2669691685346,4.49056151092918,16.6580894032411,5.11707249066703,4.50390979202101,2.96836132889982,10.7946785661859,7.28003073783821,21.8458234996732,9.34657972530518,6.04293967991788,0,3.80962293576241,8.65561295997425,9.87404254215618,3.64182336013434,3.01586154406675,0,0,0,0,0.422206515571503,0,0.340187410553031,1.72732732881711,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,3.25378394664303,4.94596855909067,0,0,2.29706215198469,0.650060246036521,19.2820715812991,16.3373513913686,10.0131601124519,8.74970945938938,5.65129947186575,22.2359906877326,9.1360517165964,5.19882427238216,12.2864209192498,29.4207149342541,8.07198282933446,13.9097856619097,18.5118738965656,6.04299214086472,26.1294247869431,2.0911118104818,10.1651081458109,0.532306030317022,3.47973196830029,2.03856641014312,4.15062171551775,5.95453390975468,4.74569137078089,9.53150969619124,0.255897791311334,21.8248883897299,5.72765846266686,0.78494864019923,5.75591864266607,3.29444435683266,5.65499531259295,1.81964233415984,3.17020642346017,0.842516912477962,0.48763373908959,32.6576076105921,0,9.14549406433505,11.8780562841119,2.26016233240486,2.2054613741845,3.98063385144732,1.75380354101505,0.578775534266688,5.9030527684197,1.82619339266434,2.16876448669825,1.12678241012897,16.0620714468538,11.0038925934696,0.7133421029625,10.2880708580473,9.28873595309722,12.5132059324763,0.379473173765715,1.04980416073495,2.98288549449087,1.34060455107157,2.17781969722645,7.62564786291911,1.29151611801369,0,0.443430153536676,3.21612760289743,20.8053519785189,21.4098417999865,10.2536493691349,7.14695326373367,6.9931586424653,20.751145958167,32.941917671525,8.72437693923697,0,0,3.67560323971548,0.371606350251437,0.144269212976445,1.92082977040718,0,1.39705560002972,1.53204296105893,2.32840940996271,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0.338583555603207,1.92705690124439,1.00899853595524,2.55507742614196,0.343505344755765,0,0,0.166849141711909,2.54004524022652,0,0,0.270455678475983,0.33307196799782,0,0,14.2112933893737,0,5.90649936670635,0,0.47748896947538,0.296964680832639,0,0.994147647766298,2.81338832821025,9.68385733699281,35.2680290845266,0,1.79323189425963,2.21027132424918,0,6.23838963263144,0,4.3545542272653,2.51631383212515,1.9692329214317,0.511572370226872,6.70775158331149,7.18449277040819,12.2250689159101,0,2.69027484669369,0,0,0,4.34999745260876,11.37934482855,0,0,0,0,0.347249989866585,1.77148277162768,2.41192877250816,4.5774520895125,1.21637185924347,0.295547618953547,0.219385397153973,1.74301541630384,8.5048484009948,1.69290568708354,9.1153644677601,0,0,0,0.957003479195758,0.549585560411174,0,3.06579894587209,1.09886179476517,0,0,0,0,0,0.158936578980379,0.421996129056054,0.326465616318295,0,0,0,4.0690479671536,1.22206028986725,6.8199859596543,3.21266241260907,3.02823653565821,0.67401132980677,0,0.234264445725339,0.182454789215666,17.6098157038881,0.728341138602278,0.394584402849391,0,0,10.1730393201866,2.40517471063188,1.03688191397247,0,0.330991955875499,1.2557316736289,0,2.27687636823834,0.554698692052555,0,33.6113923131315,19.0659662411082,2.09672001890436,1.0319161948297,0.870806981601766,1.31560770755134,1.06750094169172,4.26751672549045,4.14803795450051,1.35588444468319,3.97421581475578,2.38457534043588,0.316553979779393,0.586654148204409,16.9135110730736,0.640358984218058,3.59657297247834,0,0,0,21.4641649002343,7.33089959836052,3.77110455386873,3.80531777006119,5.85775939349066,2.65195365854437,28.3171578103489,2.40168115483916,7.66670121795161,1.27746588066972,1.71906176567983,0.788662062837943,5.30636562417283,0.687481272035051,26.5613019093421,0.599037001496973,0.858452096273142,3.79391477651183,2.08268764708851,2.52209918479682,0,0,0,0,3.05125192695721,0.169346664131569,2.38568906942791,4.35850899557042,0,0,0,0.674921674654501,0,0.121499113316049,2.0126081255956,4.2555081941567,0.419636705079985,7.39202355635845,0.717149357331379,24.7570604542084,5.00286728461357,3.31045985182716,0,2.17199840701485,0.864221491201268,3.26587360109409,2.39460383124975,1.06720276974141,4.25970054463554,4.4191715692849,2.63794020620548,1.32506888912221,5.17131825446202,5.81823447667836,0,0.704815022316672,7.79548111744171,5.50215067848831,2.07119527673598,9.92332043623902,0,0,99.5812362121484,1.08803560673895,0.2506898940227,1.83807346058077,1.31149052283922,0,0,3.29470915235301,4.50687350543399,4.58727356552057,6.65574309221114,1.36612086471044,0,3.99937305478741,13.345122343665,12.8459400095235,10.1164302470214,0,0,15.0747350915743,34.8232831672364,23.8566520446124,17.6144794905833,27.1693333892781,24.0249029831065,27.003128070837,17.2403253090093,11.346915642543,10.9412810992329,6.5311674537118,29.6870054027979,9.9368292400806,11.1970676117031,7.70940972218185,7.30443086536427,20.1345196056273,9.52013030421988,16.2748293281865,5.8191570944819,10.4188240331214,7.4245401580559,5.97143833047924,0.400027764663154,15.4528067332257,12.459731084339,3.78554694685953,0.57785949122191,9.00654683774688,7.82982875895635,7.70800146741726,2.31522474323834,16.6420959064398,0.179088841081487,0.617602894321944,12.2799067764076,4.59391779459291,3.27953865060555,2.70307905044916,0,0,6.38105907972503,2.62691028688288,0.389720617678777,0,0.817826971279221,3.60370833731054,0.491545817507439,9.50904555113822,1.9998739585493,0.533458648470704,5.85530930846773,2.83757976783418,13.0715224678807,11.0504811098361,9.95323616052756,0,2.69562028491704,0.157265941855896,0,0,0,2.97445834221605,0.558644917973244,8.90412181829572,0,0,3.52675943690684,1.2249819094128,0.321146125482298,2.8339315265117,3.03304332208587,0.41023272848151,0.252071696221718,0.0691572524642179,0.484426936895553,1.42769420259154,16.9795553006774,9.55554759116697,26.5971467856435,9.93520728892909,3.05105676373734,16.5686382254424,0.198916222116275,5.11430232774949,3.42898616795984,0,0,2.94789451518174,3.84425824164318,0.337687923091973,2.34323429584154,3.72036233702131,0.0634158101939068,0,0,0.992422356778588,0.879356221798103,13.1595300468783,2.67850917939143,2.69026977775059,0,2.50428410486427,2.39496399439125,0.576169937778896,13.7190407549935,1.2914249265598,0.197318320688547,0,0.111231401892069,3.61068227112365,2.19961825882403,0.280272163313789,0,0.431855182437243,3.34426181520935,1.00067161847319,0,0,0,8.81882501203278,23.2082103862601,4.7801173586306,2.07377898544228,0,26.6247001643772,35.9600568083645,0,0.4582137370881,1.24082554265728,0.955538938977433,0,1.3741032706134,0,0.647428837187895,2.97722139883116,0,1.94284397223656,0,0,0,0,0,0.452888530700021,0.926089897295336,0.874238242015829,0,1.71603825227734,0.471353094203252,8.44126408594265,10.0995776111209,0.4226557275834,6.79708458751268,14.097587696978,2.8361470708374,0.299823467774787,20.355149001045,14.1157948686277,3.69110286770174,0.730336388246517,0,8.60037498908708,0,0.0679914901909147,0,0.5290268405154,7.06790534516827,11.5543907157855,8.21990468035199,0.126166424835079,0.327796715891087,0.126698501011437,0.101988829741982,0.26721740526556,0.827054095813604,0,3.18270532516606,0,4.97501663675268,5.89568076412803,1.49263787330687,0.23806443146374,0.904244737704086,1.24149428591716,1.56984607612859,5.02812550397503,0.202117188958219,2.61260097476354,0.684466602170562,0.336760265072938,16.0657740079595,2.66128285236811,12.861716440534,2.24127426343202,3.8614456457388,2.60493086109102,0,1.1001729976458,1.62758471326295,5.99181096766961,1.81146414231924,0.320568492303233 | |||
|short_description=p3@IFI16 | |||
}} |
Latest revision as of 21:58, 17 September 2015
Short description: | p3@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFI16_5end |
Coexpression cluster: | C3886_CD14_malignant_oral_Keratinocyte_Mallassezderived_Smooth_Small |
Association with transcript: | 72bp_to_ENST00000430894_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | E7EPR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.25e-24 | 48 |
phagocyte | 8.25e-24 | 48 |
classical monocyte | 8.25e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.25e-23 | 42 |
monopoietic cell | 1.85e-21 | 59 |
monocyte | 1.85e-21 | 59 |
monoblast | 1.85e-21 | 59 |
promonocyte | 1.85e-21 | 59 |
myeloid leukocyte | 6.42e-21 | 72 |
macrophage dendritic cell progenitor | 9.64e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.74e-18 | 66 |
granulocyte monocyte progenitor cell | 3.75e-18 | 67 |
somatic stem cell | 8.89e-10 | 433 |
multi fate stem cell | 9.72e-10 | 427 |
stem cell | 1.39e-08 | 441 |
myeloid cell | 3.00e-07 | 108 |
common myeloid progenitor | 3.00e-07 | 108 |
fibroblast | 5.08e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.26e-23 | 167 |
hematopoietic system | 1.09e-19 | 98 |
blood island | 1.09e-19 | 98 |
skeletal element | 1.72e-19 | 90 |
skeletal system | 8.35e-19 | 100 |
bone marrow | 1.75e-18 | 76 |
hemolymphoid system | 6.01e-18 | 108 |
mesoderm | 7.08e-18 | 315 |
mesoderm-derived structure | 7.08e-18 | 315 |
presumptive mesoderm | 7.08e-18 | 315 |
bone element | 4.37e-17 | 82 |
immune system | 5.04e-15 | 93 |
lateral plate mesoderm | 2.46e-14 | 203 |
embryonic structure | 1.25e-08 | 564 |
germ layer | 5.54e-08 | 560 |
germ layer / neural crest | 5.54e-08 | 560 |
embryonic tissue | 5.54e-08 | 560 |
presumptive structure | 5.54e-08 | 560 |
germ layer / neural crest derived structure | 5.54e-08 | 560 |
epiblast (generic) | 5.54e-08 | 560 |