FFCP PHASE1:Hg19::chr1:232735144..232735179,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:232735144..232735179,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr1:232735144..232735179,- | |||
|id=chr1:232735144..232735179,- | |||
|ontology_enrichment_celltype=CL:0002031!1.35e-09!124;CL:0002087!1.73e-09!119;CL:0000738!4.56e-09!140;CL:0000988!4.44e-08!182;CL:0000838!5.11e-08!52;CL:0002032!8.61e-08!165;CL:0000837!8.61e-08!165;CL:0000542!8.64e-08!53;CL:0000051!8.64e-08!53;CL:0000037!8.64e-08!172;CL:0000566!8.64e-08!172;CL:0000084!5.35e-07!25;CL:0000827!5.35e-07!25;CL:0000791!9.92e-07!18;CL:0000789!9.92e-07!18;CL:0002420!9.92e-07!18;CL:0002419!9.92e-07!18;CL:0000790!9.92e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.58e-26;1!CL:0000911;3.58e-26;1!CL:0000814;3.58e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.58e-26,1;CL:0000914,3.58e-26,1;CL:0000911,3.58e-26,1;CL:0000814,3.58e-26,1;CL:0002042,3.58e-26,1;CL:0002039,3.58e-26,1;CL:0002040,3.58e-26,1;CL:0002041,3.58e-26,1;CL:0000893,8.28e-14,2;CL:0002489,8.28e-14,2;CL:0000809,8.28e-14,2;CL:0000808,8.28e-14,2;CL:0000894,8.28e-14,2;CL:0000806,8.28e-14,2;CL:0000807,8.28e-14,2;CL:0000805,8.28e-14,2;CL:0002425,8.28e-14,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.28e-14;2 | |||
|ontology_enrichment_disease=DOID:162!4.25e-07!235;DOID:14566!9.64e-07!239;DOID:169!9.90e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.49e-07,4;UBERON:0005058,1.49e-07,4;UBERON:0009113,1.49e-07,4;UBERON:0003295,1.49e-07,4;UBERON:0005562,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08454080812422,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,1.33720097891754,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.3976195035728,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0.824019371133798,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,11.8755501337449,0.207376382794494,0,0,0,1.19472429772959,0.853828638089378,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.655219697692825,0.245772908753719,0,0,0,0.516644938982447,0,0,0,0,8.31313413473736,0,0.314531883711793,0.436838552768056,0.848662649770126,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.707818340086442,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.754814217833368,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:232735144..232735179,- | |||
}} |
Latest revision as of 05:04, 28 July 2015
Short description: | p@chr1:232735144..232735179, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:232735144..232735179, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.58e-26 | 1 |
immature NK T cell | 3.58e-26 | 1 |
effector T cell | 3.58e-26 | 1 |
mature NK T cell | 3.58e-26 | 1 |
immature NK T cell stage IV | 3.58e-26 | 1 |
immature NK T cell stage I | 3.58e-26 | 1 |
immature NK T cell stage II | 3.58e-26 | 1 |
immature NK T cell stage III | 3.58e-26 | 1 |
thymocyte | 8.28e-14 | 2 |
double negative thymocyte | 8.28e-14 | 2 |
double-positive, alpha-beta thymocyte | 8.28e-14 | 2 |
DN4 thymocyte | 8.28e-14 | 2 |
DN1 thymic pro-T cell | 8.28e-14 | 2 |
DN2 thymocyte | 8.28e-14 | 2 |
DN3 thymocyte | 8.28e-14 | 2 |
immature single positive thymocyte | 8.28e-14 | 2 |
early T lineage precursor | 8.28e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.49e-07 | 4 |
hemolymphoid system gland | 1.49e-07 | 4 |
thymic region | 1.49e-07 | 4 |
pharyngeal gland | 1.49e-07 | 4 |
thymus primordium | 1.49e-07 | 4 |