FFCP PHASE1:Hg19::chr1:6551720..6551736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29105 | |||
|TSSclassifier=strong | |||
|UniProt=O94827 | |||
|association_with_transcript=23bp_to_ENST00000377728,NM_020631,uc001anm.1_5end | |||
|cluster_id=chr1:6551720..6551736,- | |||
|description=CAGE_peak_12_at_PLEKHG5_5end | |||
|id=chr1:6551720..6551736,- | |||
|ontology_enrichment_celltype=CL:0000066!2.82e-18!254;CL:0000220!2.30e-15!246;CL:0002321!2.51e-15!248;CL:0000548!6.65e-12!679;CL:0000004!6.65e-12!679;CL:0000255!6.65e-12!679;CL:0000012!1.62e-11!682;CL:0000055!3.74e-10!180;CL:0002076!5.40e-09!43;CL:0000359!1.54e-07!32;CL:0000187!1.63e-07!54;CL:0000183!3.47e-07!59;CL:0000003!3.83e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.78e-14;4!CL:0000731;6.78e-14;4!CL:0002592;3.27e-10;3!CL:0002368;3.06e-08;13!CL:0000575;4.06e-08;2!CL:0002327;6.20e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.23e-14,4;CL:0000731,7.23e-14,4;CL:0002592,1.59e-10,3;CL:0002368,1.69e-08,13;CL:0002321,3.62e-08,250;CL:0000575,3.76e-08,2;CL:0002327,4.98e-08,4;CL:0000066,2.21e-07,253;CL:0002076,5.36e-07,42;CL:0000359,8.48e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!4.74e-10!42;UBERON:0003509!4.74e-10!42;UBERON:0004572!4.74e-10!42;UBERON:0003104!7.63e-09!238;UBERON:0009142!7.63e-09!238;UBERON:0000475!3.22e-08!365;UBERON:0003914!4.49e-08!118;UBERON:0000486!7.38e-08!82;UBERON:0005256!1.74e-07!143;UBERON:0002100!1.81e-07!216;UBERON:0004872!2.00e-07!84;UBERON:0000483!2.77e-07!309;UBERON:0000481!5.00e-07!347;UBERON:0000119!6.15e-07!312;UBERON:0001981!6.41e-07!60;UBERON:0007500!6.41e-07!60;UBERON:0004537!6.41e-07!60;UBERON:0006965!6.41e-07!60;UBERON:0002049!7.68e-07!79;UBERON:0007798!7.68e-07!79;UBERON:0004573!8.81e-07!33;UBERON:0004571!8.81e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.09e-11;5!UBERON:0003498;3.27e-10;3!UBERON:0005985;3.27e-10;3!UBERON:0001621;3.27e-10;3!UBERON:0005910;2.95e-09;6!UBERON:0000964;3.54e-08;4!UBERON:0010409;3.54e-08;4!UBERON:0001911;6.20e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.30e-11,5;UBERON:0001621,1.59e-10,3;UBERON:0005910,3.07e-09,6;UBERON:0001911,4.98e-08,4;UBERON:0005333,4.98e-08,4;UBERON:0008425,4.98e-08,4;UBERON:0005311,4.98e-08,4;UBERON:0000964,5.10e-08,4;UBERON:0010409,5.10e-08,4;UBERON:0004348,5.10e-08,4;UBERON:0005427,5.10e-08,4;UBERON:0001637,4.87e-07,42;UBERON:0003509,4.87e-07,42;UBERON:0004572,4.87e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,1.83600622119828,0,0,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.665188192387692,0.527008714158756,0.0654895377488563,4.00724817121796,3.70784442784429,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0,0.44905874525234,0,1.53316637465883,0,0,0,0,5.66922267785295,0,0.506522046658319,0.794455084879313,0.860509862246441,1.06400514659507,0.560677600142307,2.1349799145941,0.98667019366864,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0,0,0,0.910161361938026,0,0.673344455816265,0.375355559615893,0,0,0,0,0.567160915800105,0.538168907066586,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.757301322732344,0,0,0.355009592516614,0.201504196455281,0.508681776931463,0.193260853163297,0.545492241181669,1.14721838155602,0.121973706129595,0,0,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.343135620597051,1.64625428112938,1.1240175325762,0.502644862058154,0.185176890317059,0,1.03993478527958,0,0.231860809950154,0.587043471179108,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.708875486211932,1.52249488594842,2.90633938513962,2.30029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0.871533458600294,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0.153461973288062,0,0,0,0.160853921143607,0,0,1.06537035187876,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,1.38121483403844,0.229628896329213,0.182091168006717,0,0.902399225814824,0.539107359730903,2.35304930753057,0,0,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.178064071293475,0.495854746082934,1.72971060628596,7.2739246121913,2.8324178639554,0,0,0,0.924100740528266,0.532306030317022,0.869932992075073,0.55597265731176,1.86062352764589,0,0,0.190630193923825,0,0,0.95460974377781,2.35484592059769,0,0,0,1.61745985258653,3.17020642346017,1.68503382495592,0,0.243713489631284,3.16950440270266,0.272999822815972,0.282810863907425,0,2.75682671773062,0.66343897524122,0,0.578775534266688,0,2.02910376962704,0.30982349809975,0.845086807596724,0.143411352204052,0.0982490410131212,2.49669736036875,0.709522128141196,0,0,0,0,1.82822014178473,0,1.08890984861323,0,1.29151611801369,3.36942951335251,3.10401107475673,3.44585100310439,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,1.43246690842614,0,0.614321404198464,0,0,1.00177834520615,0,0,0,0,0,2.24991101504741,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.971121518136371,0,0,0,0.063186579628488,0,0,0.664653872707185,1.65495977937749,0.627865836814451,1.19472429772959,0,3.05084280628905,0.173559738335131,1.17590876897253,0.174118413160805,0,1.0319161948297,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,1.37041924646751,0.19871461170299,0,0,0.400794101257669,0,0,0.144090417154106,0,0,1.00838358591705,0.621262677827163,0.235694034616795,0.271808412147228,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,1.6896053843105,0.35857467866569,0.191915197319445,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0.681552087141687,0.339936274560377,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0.941063278792687,0,0,0.597019211547496,0,0,0.18940300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| |||
|short_description=p12@PLEKHG5 | |||
}} |
Latest revision as of 22:42, 18 September 2015
Short description: | p12@PLEKHG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PLEKHG5_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000377728, NM_020631, uc001anm.1_5end |
EntrezGene: | PLEKHG5 |
HGNC: | 29105 |
UniProt: | O94827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.23e-14 | 4 |
urothelial cell | 7.23e-14 | 4 |
smooth muscle cell of the coronary artery | 1.59e-10 | 3 |
respiratory epithelial cell | 1.69e-08 | 13 |
embryonic cell | 3.62e-08 | 250 |
corneal epithelial cell | 3.76e-08 | 2 |
mammary gland epithelial cell | 4.98e-08 | 4 |
epithelial cell | 2.21e-07 | 253 |
endo-epithelial cell | 5.36e-07 | 42 |
vascular associated smooth muscle cell | 8.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.30e-11 | 5 |
coronary artery | 1.59e-10 | 3 |
transitional epithelium | 3.07e-09 | 6 |
mammary gland | 4.98e-08 | 4 |
mammary bud | 4.98e-08 | 4 |
mammary ridge | 4.98e-08 | 4 |
mammary placode | 4.98e-08 | 4 |
cornea | 5.10e-08 | 4 |
eye surface | 5.10e-08 | 4 |
optic eminence | 5.10e-08 | 4 |
corneal primordium | 5.10e-08 | 4 |
artery | 4.87e-07 | 42 |
arterial blood vessel | 4.87e-07 | 42 |
arterial system | 4.87e-07 | 42 |