FFCP PHASE1:Hg19::chr1:75600333..75600348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=431707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |||
|TSSclassifier=strong | |||
|UniProt=E9PGE3 | |||
|association_with_transcript=-218bp_to_ENST00000356261,uc001dgq.2_5end | |||
|cluster_id=chr1:75600333..75600348,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_5_at_LHX8_5end | |||
|id=chr1:75600333..75600348,+ | |||
|ontology_enrichment_celltype=CL:0002556!2.53e-33!6;CL:0002552!4.13e-18!5;CL:0002195!1.13e-11!2;CL:0002571!1.13e-11!2;CL:0000057!1.66e-11!75;CL:0002580!3.80e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!2.53e-33!6;UBERON:0003672!2.53e-33!6;UBERON:0003129!3.77e-31!11;UBERON:0000075!3.55e-26!13;UBERON:0005944!3.55e-26!13;UBERON:0004288!3.55e-26!13;UBERON:0003089!3.55e-26!13;UBERON:0000165!7.46e-22!28;UBERON:0000930!7.46e-22!28;UBERON:0000078!3.03e-14!18;UBERON:0001444!3.40e-14!48;UBERON:0001875!2.02e-12!2;UBERON:0006514!2.02e-12!2;UBERON:0000033!1.10e-11!123;UBERON:0001828!2.27e-11!8;UBERON:0000153!5.81e-11!129;UBERON:0007811!5.81e-11!129;UBERON:0009663!1.23e-07!7;UBERON:0001282!3.13e-07!1;UBERON:0009842!3.13e-07!1;UBERON:0003704!3.13e-07!1;UBERON:0001171!3.13e-07!1;UBERON:0001172!3.13e-07!1;UBERON:0003102!3.68e-07!95;UBERON:0005705!8.75e-07!1;UBERON:0008193!8.75e-07!1;UBERON:0002514!8.75e-07!1;UBERON:0003462!8.75e-07!1;UBERON:0008001!8.75e-07!1;UBERON:0007914!8.75e-07!1;UBERON:0003457!8.75e-07!1;UBERON:0009292!8.75e-07!1;UBERON:0007375!8.75e-07!1;UBERON:0003323!8.75e-07!1;UBERON:0002397!8.75e-07!1;UBERON:0001709!8.75e-07!1;UBERON:0004066!8.75e-07!1;UBERON:0002244!8.75e-07!1;UBERON:0005620!8.75e-07!1;UBERON:0004068!8.75e-07!1;UBERON:0004362!8.75e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.91e-41;1!UBERON:0009842;9.91e-41;1!UBERON:0003704;9.91e-41;1!UBERON:0001171;9.91e-41;1!UBERON:0001172;9.91e-41;1!UBERON:0001875;5.69e-21;2!UBERON:0006514;5.69e-21;2!UBERON:0001280;1.40e-14;3!UBERON:0004647;1.40e-14;3!UBERON:0002394;2.80e-11;4!UBERON:0003928;2.80e-11;4!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0002294;5.38e-07;7!UBERON:0001173;5.38e-07;7!UBERON:0009663;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.91e-41,1;UBERON:0009842,9.91e-41,1;UBERON:0003704,9.91e-41,1;UBERON:0001171,9.91e-41,1;UBERON:0001172,9.91e-41,1;UBERON:0001875,4.66e-21,2;UBERON:0006514,4.66e-21,2;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0009663,5.70e-07,7 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816616685019573,0.122834317311768,0.826606249406124,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,0.554128230968366,0.438977620880838,0.612975591598039,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,2.96249345202203,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,1.80126086612937,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,1.02652102730598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81064266732169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@LHX8 | |||
}} |
Latest revision as of 05:40, 19 September 2015
Short description: | p5@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LHX8_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -218bp_to_ENST00000356261, uc001dgq.2_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | E9PGE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.91e-41 | 1 |
acinus | 9.91e-41 | 1 |
intrahepatic bile duct | 9.91e-41 | 1 |
portal lobule | 9.91e-41 | 1 |
hepatic acinus | 9.91e-41 | 1 |
globus pallidus | 4.66e-21 | 2 |
pallidum | 4.66e-21 | 2 |
liver parenchyma | 1.40e-14 | 3 |
liver lobule | 1.40e-14 | 3 |
hepatic duct | 1.40e-14 | 3 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
telencephalic nucleus | 5.70e-07 | 7 |