FFCP PHASE1:Hg19::chr20:48124063..48124075,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:48124063..48124075,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48124063..48124075,- | |||
|id=chr20:48124063..48124075,- | |||
|ontology_enrichment_celltype=CL:0000055!3.93e-13!180;CL:0000057!4.71e-11!75;CL:0000359!9.24e-09!32;CL:0000077!1.87e-08!19;CL:0002334!4.60e-07!12;CL:0000192!4.90e-07!42;CL:0000514!4.90e-07!42;CL:0000499!4.91e-07!27;CL:0000187!9.10e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.81e-13;3!CL:0000388;6.81e-13;3!CL:0002579;5.88e-12;3!CL:0000077;1.44e-11;19!CL:1000306;2.50e-09;4!CL:0002547;2.50e-09;4!CL:0002617;3.57e-08;2!CL:0002334;1.16e-07;12!CL:0002595;2.37e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.96e-13,3;CL:0000388,6.96e-13,3;CL:0002579,5.08e-12,3;CL:0000077,1.50e-11,19;CL:1000306,1.94e-09,4;CL:0002547,1.94e-09,4;CL:0002617,3.51e-08,2;CL:0000057,9.62e-08,76;CL:0002334,1.12e-07,12;CL:0002595,1.97e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.29e-12!84;UBERON:0001637!1.53e-10!42;UBERON:0003509!1.53e-10!42;UBERON:0004572!1.53e-10!42;UBERON:0004573!6.05e-10!33;UBERON:0004571!6.05e-10!33;UBERON:0003914!3.21e-09!118;UBERON:0000948!8.25e-09!24;UBERON:0005498!8.25e-09!24;UBERON:0004140!8.25e-09!24;UBERON:0009881!8.25e-09!24;UBERON:0004141!8.25e-09!24;UBERON:0003084!8.25e-09!24;UBERON:0007005!8.25e-09!24;UBERON:0004139!8.25e-09!24;UBERON:0004291!8.25e-09!24;UBERON:0001981!9.14e-09!60;UBERON:0007500!9.14e-09!60;UBERON:0004537!9.14e-09!60;UBERON:0006965!9.14e-09!60;UBERON:0004535!1.76e-07!110;UBERON:0007100!2.47e-07!27;UBERON:0001009!5.33e-07!113;UBERON:0002385!8.09e-07!63;UBERON:0001015!8.09e-07!63;UBERON:0000383!8.09e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.52e-15;9!UBERON:0000042;7.52e-15;9!UBERON:0007846;6.81e-13;3!UBERON:0000043;6.81e-13;3!UBERON:0007845;6.81e-13;3!UBERON:0003688;4.60e-10;6!UBERON:0002358;4.60e-10;6!UBERON:0003684;4.60e-10;6!UBERON:0001178;4.60e-10;6!UBERON:0004797;2.50e-09;4!UBERON:0000415;2.50e-09;4!UBERON:0007240;2.50e-09;4!UBERON:0005742;2.50e-09;4!UBERON:0005734;2.50e-09;4!UBERON:0004664;2.50e-09;4!UBERON:0004663;2.50e-09;4!UBERON:0003834;2.37e-07;5!UBERON:0001533;2.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.96e-13,3;UBERON:0000043,6.96e-13,3;UBERON:0007845,6.96e-13,3;UBERON:0004457,4.75e-11,12;UBERON:0000042,4.75e-11,12;UBERON:0003688,3.54e-10,6;UBERON:0002358,3.54e-10,6;UBERON:0003684,3.54e-10,6;UBERON:0001178,3.54e-10,6;UBERON:0000415,1.94e-09,4;UBERON:0007240,1.94e-09,4;UBERON:0005742,1.94e-09,4;UBERON:0005734,1.94e-09,4;UBERON:0004664,1.94e-09,4;UBERON:0004663,1.94e-09,4;UBERON:0003834,1.97e-07,5;UBERON:0001533,1.97e-07,5;UBERON:0004458,4.87e-07,49 | |||
|phase1_expression=1.2717486548939,2.5692062866918,1.55049844505568,0,0.446961094427288,7.85104671690332,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,1.22400414746552,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0.724232594804119,0.795285947051099,0.973269740605272,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,2.91250176828533,0.529636723252875,6.88407889797153,3.54668382198357,1.68203280042692,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.567160915800105,0,0,0.211931901159562,0.900273288253207,0.618315175430633,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0.757301322732344,0.552299391853796,0.646584227275248,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,5.72734816413214,3.48613383440118,15.8957055979471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0,0,0,1.03473071292505,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,2.23297027036899,0.460385919864187,3.08726103876381,3.07533958213682,1.53512174720011,4.82561763430822,0,0.154209693802656,0.887808626565635,0,0,0.232420756919918,0.120859449591622,0,0,0.229628896329213,0.728364672026868,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,6.42735719376638,0,0,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0.929691098594572,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0.38126038784765,0,0,0.636406495851874,3.13979456079692,0,0,0,0.404364963146632,0,0,0,2.43713489631284,0,0,0.989838023675989,3.39024349860728,0.551365343546124,2.65375590096488,3.94605796728386,0,0,0,0,0.563391205064483,0,0,0.7133421029625,0.354761064070598,13.9331039296458,11.1960263606367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,1.24415835064723,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,1.49417096317547,6.39390750662817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,2.21922344601045,0,0.754703705257725,0,0.228840068396924,2.41969478021182,0.621748802331122,0.443565449968902,0,0,0.155262956876259,2.90294345488599,0,0.521745061811734,2.10360652596106,3.04644169735036,1.22061219961398,0,1.61115835563733,0.464033759878494,0.398095888698616,0,0.686791410365586,1.34699795506368,0,0,1.07220795687463,1.30497145982606,0.453411851024545,0.231522474323834,0,0.179088841081487,0.308801447160972,7.89422578483346,0,0.38582807654183,1.52048196587765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,4.58478726797889,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,9.29987545416878,5.0839319149456,8.21990468035199,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.684466602170562,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0.402547587182052,0 | |||
|short_description=p@chr20:48124063..48124075,- | |||
}} |
Latest revision as of 15:01, 28 July 2015
Short description: | p@chr20:48124063..48124075, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48124063..48124075, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.96e-13 | 3 |
tendon cell | 6.96e-13 | 3 |
omentum preadipocyte | 5.08e-12 | 3 |
mesothelial cell | 1.50e-11 | 19 |
fibroblast of tunica adventitia of artery | 1.94e-09 | 4 |
fibroblast of the aortic adventitia | 1.94e-09 | 4 |
adipocyte of breast | 3.51e-08 | 2 |
fibroblast | 9.62e-08 | 76 |
preadipocyte | 1.12e-07 | 12 |
smooth muscle cell of the subclavian artery | 1.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.96e-13 | 3 |
tendon | 6.96e-13 | 3 |
regular connective tissue | 6.96e-13 | 3 |
cavity lining | 4.75e-11 | 12 |
serous membrane | 4.75e-11 | 12 |
omentum | 3.54e-10 | 6 |
peritoneum | 3.54e-10 | 6 |
abdominal cavity | 3.54e-10 | 6 |
visceral peritoneum | 3.54e-10 | 6 |
artery wall | 1.94e-09 | 4 |
tunica adventitia of artery | 1.94e-09 | 4 |
adventitia | 1.94e-09 | 4 |
tunica adventitia of blood vessel | 1.94e-09 | 4 |
aorta tunica adventitia | 1.94e-09 | 4 |
aorta wall | 1.94e-09 | 4 |
thoracic segment blood vessel | 1.97e-07 | 5 |
subclavian artery | 1.97e-07 | 5 |
body cavity or lining | 4.87e-07 | 49 |