FFCP PHASE1:Hg19::chr20:62680984..62680999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11194 | |||
|TSSclassifier=strong | |||
|UniProt=P35713 | |||
|association_with_transcript=0bp_to_ENST00000340356_5end | |||
|cluster_id=chr20:62680984..62680999,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_SOX18_5end | |||
|id=chr20:62680984..62680999,- | |||
|ontology_enrichment_celltype=CL:0002139!4.97e-18!24;CL:0000115!5.94e-17!35;CL:0000071!4.40e-14!18;CL:0002546!4.40e-14!18;CL:0002078!7.50e-14!44;CL:0000213!1.21e-12!57;CL:0000215!1.21e-12!57;CL:1000413!9.13e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.33e-21;24!CL:0000115;2.55e-17;36!CL:0000071;1.30e-16;18!CL:0002078;1.95e-10;45!CL:1000413;5.07e-09;9!CL:0000213;2.34e-08;58!CL:0000215;2.34e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.40e-21,24;CL:0000115,1.78e-20,36;CL:0000071,1.33e-16,18;CL:0002546,1.33e-16,18;CL:0002078,1.05e-15,45;CL:0000213,1.20e-13,58;CL:0000215,1.20e-13,58;CL:1000413,5.12e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-16;18!UBERON:0006601;3.36e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-36!115;UBERON:0004111!5.15e-18!241;UBERON:0000477!2.85e-17!286;UBERON:0000025!6.01e-16!194;UBERON:0001049!4.85e-15!57;UBERON:0005068!4.85e-15!57;UBERON:0006241!4.85e-15!57;UBERON:0007135!4.85e-15!57;UBERON:0001017!3.59e-14!82;UBERON:0001986!4.40e-14!18;UBERON:0004638!4.40e-14!18;UBERON:0004852!4.40e-14!18;UBERON:0000955!6.67e-14!69;UBERON:0006238!6.67e-14!69;UBERON:0005743!1.59e-13!86;UBERON:0000073!7.20e-13!94;UBERON:0001016!7.20e-13!94;UBERON:0002616!2.18e-12!59;UBERON:0003080!3.54e-12!42;UBERON:0002346!4.80e-12!90;UBERON:0002780!1.24e-11!41;UBERON:0001890!1.24e-11!41;UBERON:0006240!1.24e-11!41;UBERON:0003075!1.80e-11!86;UBERON:0007284!1.80e-11!86;UBERON:0000487!2.94e-11!22;UBERON:0006914!1.32e-10!25;UBERON:0002020!7.66e-10!34;UBERON:0003528!7.66e-10!34;UBERON:0001893!9.14e-10!34;UBERON:0002791!1.89e-09!33;UBERON:0001869!3.45e-09!32;UBERON:0002619!9.66e-09!22;UBERON:0000483!1.08e-08!309;UBERON:0000119!1.43e-08!312;UBERON:0001950!3.87e-08!20;UBERON:0003915!9.13e-08!9;UBERON:0004700!9.13e-08!9;UBERON:0001917!9.13e-08!9;UBERON:0000924!2.53e-07!173;UBERON:0006601!2.53e-07!173;UBERON:0000153!4.66e-07!129;UBERON:0007811!4.66e-07!129;UBERON:0000956!6.83e-07!25;UBERON:0000203!6.83e-07!25;UBERON:0004121!7.21e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.30e-16;18!UBERON:0001986;1.30e-16;18!UBERON:0004852;1.30e-16;18!UBERON:0000487;1.01e-13;22!UBERON:0007023;2.46e-12;114!UBERON:0006914;5.18e-12;25!UBERON:0002780;2.85e-10;41!UBERON:0001890;2.85e-10;41!UBERON:0002619;3.43e-10;22!UBERON:0003528;5.45e-10;34!UBERON:0002020;5.45e-10;34!UBERON:0001893;6.48e-10;34!UBERON:0001869;7.04e-10;32!UBERON:0002791;8.17e-10;32!UBERON:0001950;1.84e-09;20!UBERON:0000073;4.61e-09;53!UBERON:0002616;4.61e-09;53!UBERON:0003915;5.07e-09;9!UBERON:0004700;5.07e-09;9!UBERON:0001917;5.07e-09;9!UBERON:0000922;3.77e-08;49!UBERON:0000956;4.27e-08;25!UBERON:0000203;4.27e-08;25!UBERON:0002465;2.63e-07;10!UBERON:0000955;7.12e-07;68!UBERON:0001017;8.76e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.20e-44,114;UBERON:0004111,1.50e-18,240;UBERON:0000025,1.77e-17,192;UBERON:0004638,1.33e-16,18;UBERON:0001986,1.33e-16,18;UBERON:0004852,1.33e-16,18;UBERON:0001049,1.45e-16,56;UBERON:0005068,1.45e-16,56;UBERON:0006241,1.45e-16,56;UBERON:0007135,1.45e-16,56;UBERON:0000073,2.53e-15,53;UBERON:0002616,2.53e-15,53;UBERON:0001017,5.48e-14,81;UBERON:0002780,8.65e-14,41;UBERON:0001890,8.65e-14,41;UBERON:0003080,8.65e-14,41;UBERON:0006240,8.65e-14,41;UBERON:0000487,9.49e-14,22;UBERON:0001016,1.63e-13,89;UBERON:0000955,2.15e-13,68;UBERON:0006238,2.15e-13,68;UBERON:0011216,2.53e-12,223;UBERON:0006914,4.98e-12,25;UBERON:0003528,1.22e-11,34;UBERON:0002020,1.22e-11,34;UBERON:0001893,1.51e-11,34;UBERON:0002346,3.54e-11,86;UBERON:0003075,3.91e-11,82;UBERON:0007284,3.91e-11,82;UBERON:0001869,7.47e-11,32;UBERON:0002791,8.99e-11,32;UBERON:0010314,3.35e-10,132;UBERON:0002619,3.47e-10,22;UBERON:0001950,1.83e-09,20;UBERON:0003915,5.12e-09,9;UBERON:0004700,5.12e-09,9;UBERON:0001917,5.12e-09,9;UBERON:0010371,1.68e-08,104;UBERON:0000956,4.30e-08,25;UBERON:0000203,4.30e-08,25;UBERON:0002465,2.40e-07,10;UBERON:0000055,5.39e-07,68 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,2.00146596706261,0.893922188854576,1.74467704820074,0,0,1.04474251279935,1.96587149201207,4.18680700783456,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0.136874425072884,0,15.4355079610862,11.5761831124424,9.20916141370047,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0.869409257205157,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,195.045493051169,10.0605128955545,16.877858163346,0,0.50133791063589,0.579386075843295,0.795285947051099,0,0,0.221729397462564,0.43917392846563,55.142190784537,0,0,0,0,0,0,0,0.371457501329565,276.87603346182,335.491492091389,396.434452835873,290.002974207017,291.552108165885,463.573900669014,174.510797058237,222.755246403962,94.9895921373516,186.104660697157,425.387758867259,300.307481758812,818.584141016561,237.878012983777,400.210122253589,228.428704950676,302.890123672703,260.920800279858,613.266549863533,506.907862209381,644.503735147173,0,0,0,0,0.25326102332916,0,0.860509862246441,1.06400514659507,0,3.20246987189115,0.49333509683432,2.17847724779836,23.1702355959863,18.4711950518208,0.302714855289863,0,0,0,28.5235910772225,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,3.64064544775211,1.43723628363248,0,0.125118519871964,0,0,0,0,2.38207584636044,1.25572744982203,0,0.423863802319124,0,0.103052529238439,1.03056216018252,0,0.675105328965065,1.55899208257918,1.26216887122057,0,0.323292113637624,0,0,3.05209066158878,0.193260853163297,0,0,0.853815942907168,0.132529768321485,1.62671520017326,2.28054321033815,0.756962552626885,3.28479623168247,1.56449532329816,5.78916844373597,1.38134921352481,0,0.721879481669586,3.31259040111563,3.20310911148393,2.16909926895134,5.07352274569012,4.35758888184812,1.42362371466658,1.48314438976181,0.784885860501384,1.15424147083917,888.001011913452,302.922231415443,0.4115740113314,14.7008711385542,1.26755034821831,0.982827216677626,25.4039659873004,0,0.368965315629341,0,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.352226082707465,122.422747701391,452.336845787349,246.569381296039,2.37061319387782,2.57545848628462,0,0,0,0,0,0,0,0,6.13412286664338,0,0.088048434013226,2.90259361757081,0.720599767084807,1.8936365013957,0.444485260045183,0.763976851116555,0,27.3715913636328,1.43958489784653,6.30720421472227,0.285826432630578,0.784917590417525,0,0.51336800074665,0,60.80159579482,63.3977064417,0,0,1.28603687131071,0,0,0.57191197463259,12.4802969240032,0,40.3912868524231,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,3.44585807502342,0,0,0,0,0,0,0,0.128343036279748,2.03275699377971,0,0,1.00509759200609,0,0,0,0,0.12269149171914,1.50051156317903,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,2.93701736194111,0.686286847621712,0,0,0,0,0,0.604780586659361,0.496215615637554,1.07423381301644,0.561320188866147,1.02511319404561,2.04682899626681,0.160853921143607,1.48418066444991,0,0,0,0,0,0.846016147141356,0.802025881213139,0,0,0,0.917870904715969,0,0,0,0,0,797.271022336985,180.299327593107,131.708708822305,1354.11527862074,0.270946437543853,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0,0.512900250232778,0,0,34.0035338437484,13.9185586523882,7.01330749324998,0,0,0,0,1.07834031980251,1.38153307253517,0.137836572484531,0,0,0.767039646744908,0,0.165284915360978,0.384380134730212,0,0.30347334256665,0,0,0,0.616067160352178,0.532306030317022,0,0,0,0.744316738719335,0,0.571890581771475,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,2.478587984798,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0,1.34060455107157,0,37.092657506051,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,1.38871292465715,0,2.69544237579135,0,0,0,0,4.98948428582042,0.5745161103971,15.2404979561196,0,0.280797178113459,73.9480360067543,0,5.01268954180134,77.5356342331343,1.92705690124439,0.403599414382095,0.425846237690326,0,0,0.447352215784832,0.333698283423817,0,0,0,1.89318974933188,0,0,0,96.2558737816344,3.03401304373784,0,1.13654458722565,0,0,0.921482106297696,14.9122147164945,7.31480965334666,0,0,0,45.2292933329928,45.5868460626394,0,0.409074730008619,0,0,0,0,0,33.2428276996466,0,1.11136990144637,25.2026513984757,20.9655901845784,21.9575177801314,0.520855522170466,4.63537999979837,117.449931220437,0.1137934482855,0,9.69189495248539,14.4792216761415,2.04123229368278,5.20874984799877,17.7148277162768,11.2154687921629,4.5774520895125,10.1732919136727,15.3684761855845,31.591497190172,0.32681539055697,0,78.0275621228502,0.227884111694002,0,0,0.108647371922008,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| |||
|short_description=p1@SOX18 | |||
}} |
Latest revision as of 15:13, 17 September 2015
Short description: | p1@SOX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX18_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000340356_5end |
EntrezGene: | SOX18 |
HGNC: | 11194 |
UniProt: | P35713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.40e-21 | 24 |
endothelial cell | 1.78e-20 | 36 |
blood vessel endothelial cell | 1.33e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-16 | 18 |
meso-epithelial cell | 1.05e-15 | 45 |
lining cell | 1.20e-13 | 58 |
barrier cell | 1.20e-13 | 58 |
endothelial cell of artery | 5.12e-09 | 9 |