FFCP PHASE1:Hg19::chr2:182322842..182322860,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-107bp_to_ENST00000478440_5end | |||
|cluster_id=chr2:182322842..182322860,+ | |||
|coexpression_cluster_id=C4156 | |||
|description=CAGE_peak_7_at_ITGA4_5end | |||
|id=chr2:182322842..182322860,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.57e-63!172;CL:0000566!2.57e-63!172;CL:0000988!8.33e-59!182;CL:0002032!3.36e-58!165;CL:0000837!3.36e-58!165;CL:0000738!1.49e-45!140;CL:0002031!3.62e-42!124;CL:0002087!1.54e-40!119;CL:0000763!1.99e-29!112;CL:0000049!1.99e-29!112;CL:0000542!9.78e-27!53;CL:0000051!9.78e-27!53;CL:0000838!2.68e-26!52;CL:0000134!9.73e-20!358;CL:0002320!2.54e-18!365;CL:0000219!3.94e-17!390;CL:0000839!1.10e-16!70;CL:0002057!6.99e-16!42;CL:0000557!1.14e-15!71;CL:0000766!3.85e-15!76;CL:0000860!6.63e-14!45;CL:0000048!2.86e-13!430;CL:0000034!3.46e-13!444;CL:0002194!3.99e-13!63;CL:0000576!3.99e-13!63;CL:0000040!3.99e-13!63;CL:0000559!3.99e-13!63;CL:0002009!5.94e-13!65;CL:0000945!6.17e-13!24;CL:0000826!6.17e-13!24;CL:0000084!8.99e-13!25;CL:0000827!8.99e-13!25;CL:0000723!1.13e-12!436;CL:0000791!4.29e-12!18;CL:0000789!4.29e-12!18;CL:0002420!4.29e-12!18;CL:0002419!4.29e-12!18;CL:0000790!4.29e-12!18;CL:0000236!2.06e-10!14;CL:0000625!5.65e-10!11;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.36e-18;53!CL:0000084;2.62e-17;25!CL:0000791;1.80e-16;18!CL:0000789;1.80e-16;18!CL:0002419;1.80e-16;18!CL:0000625;9.22e-15;11!CL:0000945;1.24e-11;24!CL:0000236;6.17e-11;13!CL:0002087;9.81e-11;104!CL:0000988;1.42e-10;177!CL:0000763;3.31e-09;100!CL:0000738;1.36e-08;136!CL:0000576;1.92e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.53e-64,168;CL:0000988,1.32e-59,177;CL:0002032,1.45e-57,161;CL:0000837,1.45e-57,161;CL:0000738,3.20e-40,136;CL:0002031,3.53e-37,120;CL:0002087,1.36e-35,115;CL:0000542,2.58e-31,53;CL:0000051,2.58e-31,53;CL:0000838,1.25e-30,52;CL:0000763,1.11e-25,108;CL:0000049,1.11e-25,108;CL:0000134,5.36e-18,354;CL:0000084,1.35e-17,25;CL:0000827,1.35e-17,25;CL:0002320,4.59e-17,361;CL:0000791,8.00e-17,18;CL:0000789,8.00e-17,18;CL:0002420,8.00e-17,18;CL:0002419,8.00e-17,18;CL:0000790,8.00e-17,18;CL:0000625,7.41e-15,11;CL:0000219,2.42e-14,386;CL:0000236,4.57e-12,14;CL:0000860,7.57e-12,42;CL:0002057,7.57e-12,42;CL:0000945,9.66e-12,24;CL:0000826,9.66e-12,24;CL:0000839,6.67e-11,66;CL:0000034,7.72e-11,441;CL:0000048,2.15e-10,427;CL:0000723,7.17e-10,433;CL:0000766,1.28e-09,72;CL:0000473,1.65e-09,48;CL:0000234,1.65e-09,48;CL:0000557,1.80e-09,67;CL:0002393,2.00e-09,9;CL:0002397,2.00e-09,9;CL:0002194,5.49e-07,59;CL:0000576,5.49e-07,59;CL:0000040,5.49e-07,59;CL:0000559,5.49e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000051;3.36e-18;53!CL:0000790;1.80e-16;18!CL:0002057;7.28e-09;42!CL:0000049;2.66e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.16e-15!51;DOID:0060083!1.16e-15!51;DOID:1240!6.58e-14!39;DOID:8692!1.87e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.05e-17;31!DOID:1240;1.24e-13;39!DOID:2531;4.08e-11;51!DOID:0060083;4.08e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.42e-18,39;DOID:8692,8.32e-18,31;DOID:2531,7.68e-17,51;DOID:0060083,7.68e-17,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.25e-25!102;UBERON:0003061!8.25e-25!102;UBERON:0002193!1.54e-22!112;UBERON:0002384!1.11e-17!375;UBERON:0001474!2.22e-14!86;UBERON:0002371!2.77e-14!80;UBERON:0002405!4.26e-11!115;UBERON:0000178!6.25e-10!15;UBERON:0000179!6.25e-10!15;UBERON:0000463!6.25e-10!15;UBERON:0004765!1.62e-09!101;UBERON:0001434!1.62e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.80e-12;15!UBERON:0000179;5.80e-12;15!UBERON:0000463;5.80e-12;15!UBERON:0002390;1.42e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-20,98;UBERON:0003061,1.55e-20,98;UBERON:0002193,3.91e-18,108;UBERON:0002384,8.42e-16,371;UBERON:0000178,5.87e-12,15;UBERON:0000179,5.87e-12,15;UBERON:0000463,5.87e-12,15;UBERON:0002405,1.20e-10,93;UBERON:0001474,2.95e-09,82;UBERON:0002371,6.21e-09,76;UBERON:0004765,1.17e-07,90;UBERON:0004177,8.19e-07,7;UBERON:0005057,8.19e-07,7 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,1.60468152070698,1.64201178899891,2.59745578335141,0.786728553697808,3.0706351847777,1.54816123316076,0,0,0,0.387336002901508,0.995184627411951,9.39521405871511,0.553995408531877,1.00272223735071,1.30206522429511,0.223915474239924,0.971680998056939,0.257575567634187,0.872389432677388,0,1.69808842831471,0.464858073811369,0.411167888021826,1.54853185447552,2.3015391385772,0.512321413058201,1.41889337933151,3.10271112662957,0,1.35426486594342,1.12945403725563,0,0.898893937780338,0,0.641858054152187,0,2.30895910130701,1.99463657621632,2.13112375266347,0.870627715885752,1.70215567407342,0.622822248995575,2.51248665256743,2.08593167368081,1.95469960234605,0.605399502633369,0.736555271975129,0.632924774881769,9.92899845666126,8.07896339867165,7.54771123830153,2.3589012540764,2.85336096398862,4.50031642751824,6.84030584978997,8.35450044236178,9.86386430329023,1.75996244461323,9.83049500271837,4.44754626931777,2.56038133539904,5.60554381850417,2.29900975981793,5.2883589822789,10.494591299889,2.84606484554724,4.11066032559657,3.44045905312706,10.5737062863221,11.7706798226123,17.9101177647052,1.7703879310245,0.786021525498329,3.90642848099067,5.85152733867373,1.95553359980154,2.36723902867367,0,5.23629147360316,1.76763544484902,1.99380505125259,2.97884250141517,2.43373507478783,3.64166173167659,6.57751618414705,2.76350017785848,8.40428948631652,3.11401782640327,3.47803076516627,2.09071047609954,14.3902865225909,8.04763036564035,6.18529401868734,11.8919255249166,5.41561204350964,5.85975108470777,7.60361635558699,6.02300476311091,9.59899583658138,4.99722906209383,8.05042656949657,5.74789597844733,3.83052812126992,3.4767225451856,3.18613688542158,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0.97364218096405,0.870648686496336,0.398873881556595,0.715471872916026,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.37223371266318,0.168776332241266,0,0,0.368199594569197,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,2.95597942737566,1.23267807618516,1.86595303986695,1.00883967391873,1.13618190083742,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0.646358578788889,0,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94061520403854,1.94064817373566,1.79680250791648,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.5885704098234,3.62873696531711,0,0,0,1.24053903909388,1.38115775959256,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0815802633495,32.9408668291375,0,0,0,0.103041011647722,4.02905645200711,7.09581699317057,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.426133137080504,0.801288320820636,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.608731130888112,0,0,0,0.294747123039363,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,6.117097657139,8.54470780761244,5.47933083552915,6.9931586424653,7.13320642311989,10.8006287447623,4.75875105776562,0.106824071127473,0,0,1.11481905075431,0.577076851905779,5.12221272108582,1.59426272728822,1.59663497146253,4.0216127727797,1.69338866179106,2.59697552219644,3.93116049358842,0.912938716132769,2.82023812391442,5.01268954180134,3.04725200042886,4.17528995269619,6.05399121573143,6.81353980304522,6.52660155035953,0.307240764308458,1.3420566473545,0.667396566847634,3.12620952643264,2.50565556505718,4.92349595790849,9.46594874665941,6.6614393599564,62.0342822386538,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,2.76283915531148,0,0,2.58478091468246,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,7.15353087370155,3.61054589708557,29.2532560144275,0,0,0,0,28.6085842164682,0,0,0,0,0,0,0,0,0.370691816839509,0.939797545549098,0.202203398942031,0.802577647298789,0,0.91227394607833,0,0,0,0,0.30607276163049,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0,5.10986352267889,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.335917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| |||
|short_description=p7@ITGA4 | |||
}} |
Latest revision as of 21:08, 18 September 2015
Short description: | p7@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ITGA4_5end |
Coexpression cluster: | C4156_acute_chronic_Reticulocytes_thymus_CD4_CD34_CD8 |
Association with transcript: | -107bp_to_ENST00000478440_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-20 | 98 |
blood island | 1.55e-20 | 98 |
hemolymphoid system | 3.91e-18 | 108 |
connective tissue | 8.42e-16 | 371 |
blood | 5.87e-12 | 15 |
haemolymphatic fluid | 5.87e-12 | 15 |
organism substance | 5.87e-12 | 15 |
immune system | 1.20e-10 | 93 |
bone element | 2.95e-09 | 82 |
bone marrow | 6.21e-09 | 76 |
skeletal element | 1.17e-07 | 90 |
hemopoietic organ | 8.19e-07 | 7 |
immune organ | 8.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.42e-18 | 39 |
myeloid leukemia | 8.32e-18 | 31 |
hematologic cancer | 7.68e-17 | 51 |
immune system cancer | 7.68e-17 | 51 |