FFCP PHASE1:Hg19::chr2:209864821..209864831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:209864821..209864831,- | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr2:209864821..209864831,- | |||
|id=chr2:209864821..209864831,- | |||
|ontology_enrichment_celltype=CL:0002563!1.51e-24!4;CL:0002536!2.56e-22!2;CL:0002253!2.56e-22!2;CL:0000349!2.10e-15!3;CL:0002577!2.10e-15!3;CL:0002251!2.64e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.91e-44;3!CL:0000349;4.07e-28;19!CL:0002253;6.48e-18;2!CL:0002536;9.86e-18;2!CL:0002563;1.22e-09;4!CL:0002537;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.22e-44,3;CL:0000349,4.07e-28,19;CL:0002253,6.48e-18,2;CL:0002536,1.27e-17,2;CL:0002563,1.22e-09,4;CL:0002537,7.01e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!1.88e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.57e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.57e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!8.64e-25!4;UBERON:0001242!1.51e-24!4;UBERON:0001262!1.51e-24!4;UBERON:0004786!1.51e-24!4;UBERON:0004808!1.51e-24!4;UBERON:0001277!1.51e-24!4;UBERON:0004907!5.74e-20!5;UBERON:0003350!8.97e-20!5;UBERON:0005631!4.25e-19!14;UBERON:0000158!4.25e-19!14;UBERON:0000305!2.31e-14!7;UBERON:0004871!1.22e-12!8;UBERON:0001301!6.97e-12!1;UBERON:0001987!8.65e-12!4;UBERON:0004340!8.65e-12!4;UBERON:0000485!2.99e-11!9;UBERON:0000478!4.15e-11!24;UBERON:0004923!4.36e-11!57;UBERON:0000059!2.18e-09!11;UBERON:0001046!2.96e-09!19;UBERON:0000344!1.44e-08!12;UBERON:0000060!1.44e-08!12;UBERON:0005409!2.65e-07!35;UBERON:0003124!4.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;4.28e-34;4!UBERON:0001987;1.17e-33;4!UBERON:0004907;1.59e-27;5!UBERON:0000478;2.04e-22;24!UBERON:0000305;9.48e-20;7!UBERON:0005631;3.71e-14;10!UBERON:0000158;3.71e-14;10!UBERON:0000059;4.00e-13;11!UBERON:0001242;1.22e-09;4!UBERON:0001262;1.22e-09;4!UBERON:0004786;1.22e-09;4!UBERON:0004808;1.22e-09;4!UBERON:0001277;1.22e-09;4!UBERON:0000160;2.09e-08;17!UBERON:0005409;8.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.25e-38,14;UBERON:0000158,7.25e-38,14;UBERON:0001052,4.28e-34,4;UBERON:0001987,8.36e-34,4;UBERON:0004340,8.36e-34,4;UBERON:0004907,1.59e-27,5;UBERON:0000478,2.04e-22,24;UBERON:0003124,7.84e-20,7;UBERON:0000305,1.15e-19,7;UBERON:0004871,2.38e-17,8;UBERON:0000059,4.00e-13,11;UBERON:0004923,6.15e-13,66;UBERON:0001242,1.22e-09,4;UBERON:0001262,1.22e-09,4;UBERON:0004786,1.22e-09,4;UBERON:0004808,1.22e-09,4;UBERON:0001277,1.22e-09,4;UBERON:0000160,2.09e-08,17;UBERON:0001046,5.16e-08,19;UBERON:0000995,2.77e-07,21;UBERON:0005795,5.40e-07,22;UBERON:0003975,5.40e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,2.81305231664718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.80952571598262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:209864821..209864831,- | |||
}} |
Latest revision as of 05:35, 29 July 2015
Short description: | p@chr2:209864821..209864831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:209864821..209864831, - |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.22e-44 | 3 |
extraembryonic cell | 4.07e-28 | 19 |
epithelial cell of large intestine | 6.48e-18 | 2 |
amniotic epithelial cell | 1.27e-17 | 2 |
intestinal epithelial cell | 1.22e-09 | 4 |
amnion mesenchymal stem cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.25e-38 | 14 |
membranous layer | 7.25e-38 | 14 |
rectum | 4.28e-34 | 4 |
placenta | 8.36e-34 | 4 |
allantois | 8.36e-34 | 4 |
lower digestive tract | 1.59e-27 | 5 |
extraembryonic structure | 2.04e-22 | 24 |
chorion | 7.84e-20 | 7 |
amnion | 1.15e-19 | 7 |
somatic layer of lateral plate mesoderm | 2.38e-17 | 8 |
large intestine | 4.00e-13 | 11 |
organ component layer | 6.15e-13 | 66 |
intestinal mucosa | 1.22e-09 | 4 |
wall of intestine | 1.22e-09 | 4 |
gastrointestinal system mucosa | 1.22e-09 | 4 |
gastrointestinal system epithelium | 1.22e-09 | 4 |
intestinal epithelium | 1.22e-09 | 4 |
intestine | 2.09e-08 | 17 |
hindgut | 5.16e-08 | 19 |
uterus | 2.77e-07 | 21 |
embryonic uterus | 5.40e-07 | 22 |
internal female genitalia | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.57e-10 | 14 |