FFCP PHASE1:Mm9::chr10:73558906..73558910,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=16|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:73558906..73558910,+|id=chr10:73558906..73558910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.70e-12!63;UBERON:0003056!1.59e-10!49;UBERON:0002346!2.37e-10!71;UBERON:0003075!2.37e-10!71;UBERON:0007284!2.37e-10!71;UBERON:0000153!2.61e-09!94;UBERON:0007811!5.31e-09!86;UBERON:0001049!1.92e-08!52;UBERON:0005068!1.92e-08!52;UBERON:0006241!1.92e-08!52;UBERON:0007135!1.92e-08!52;UBERON:0000955!1.93e-08!50;UBERON:0006238!1.93e-08!50;UBERON:0002616!9.41e-08!49;UBERON:0002021!2.58e-07!10;UBERON:0000411!2.58e-07!10;UBERON:0001950!2.58e-07!10;UBERON:0003080!3.03e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.72e-17,9;UBERON:0000019,3.72e-17,9;UBERON:0000047,3.72e-17,9;UBERON:0010312,3.72e-17,9;UBERON:0004088,3.72e-17,9;UBERON:0002104,3.72e-17,9;UBERON:0001456,3.72e-17,9;UBERON:0003072,3.72e-17,9;UBERON:0004128,3.72e-17,9;UBERON:0003071,3.72e-17,9;UBERON:0002021,1.28e-14,10;UBERON:0000411,1.28e-14,10;UBERON:0001950,1.28e-14,10;UBERON:0001444,4.99e-14,11;UBERON:0003056,1.91e-13,49;UBERON:0000020,7.46e-13,12;UBERON:0001032,7.46e-13,12;UBERON:0004456,7.46e-13,12;UBERON:0000033,7.38e-12,13;UBERON:0005085,7.38e-12,13;UBERON:0002346,5.68e-10,64;UBERON:0003075,5.68e-10,64;UBERON:0007284,5.68e-10,64;UBERON:0002619,1.42e-08,17;UBERON:0010371,1.44e-08,73;UBERON:0004121,1.41e-07,95;UBERON:0000924,1.41e-07,95;UBERON:0006601,1.41e-07,95;UBERON:0000029,3.67e-07,1;UBERON:0001097,3.67e-07,1;UBERON:0003968,3.67e-07,1;UBERON:0001467,3.67e-07,1;UBERON:0000956,6.42e-07,21;UBERON:0001869,6.42e-07,21;UBERON:0000203,6.42e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0.52091337055676,0,0,0,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.705532242814229,0,0,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0,0.251308704225729,0.695297280769106,0.767146371990992,0.41557608911912,0.486723789203273,0,0,0,4.20883711772948,0,0,0,0.30140963567143,2.10913147369116,4.74020765053944,3.84177070694888,11.1242449417777,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,1.03135543248187,1.02131881726136,0,0,0,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,2.29158205375759,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,0,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0.526139422875686,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr10:73558906..73558910,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:73558906..73558910,+ | |||
|description=CAGE_peak_at_chr10:73558906..73558910,+ | |||
|id=chr10:73558906..73558910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.70e-12!63;UBERON:0003056!1.59e-10!49;UBERON:0002346!2.37e-10!71;UBERON:0003075!2.37e-10!71;UBERON:0007284!2.37e-10!71;UBERON:0000153!2.61e-09!94;UBERON:0007811!5.31e-09!86;UBERON:0001049!1.92e-08!52;UBERON:0005068!1.92e-08!52;UBERON:0006241!1.92e-08!52;UBERON:0007135!1.92e-08!52;UBERON:0000955!1.93e-08!50;UBERON:0006238!1.93e-08!50;UBERON:0002616!9.41e-08!49;UBERON:0002021!2.58e-07!10;UBERON:0000411!2.58e-07!10;UBERON:0001950!2.58e-07!10;UBERON:0003080!3.03e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.72e-17,9;UBERON:0000019,3.72e-17,9;UBERON:0000047,3.72e-17,9;UBERON:0010312,3.72e-17,9;UBERON:0004088,3.72e-17,9;UBERON:0002104,3.72e-17,9;UBERON:0001456,3.72e-17,9;UBERON:0003072,3.72e-17,9;UBERON:0004128,3.72e-17,9;UBERON:0003071,3.72e-17,9;UBERON:0002021,1.28e-14,10;UBERON:0000411,1.28e-14,10;UBERON:0001950,1.28e-14,10;UBERON:0001444,4.99e-14,11;UBERON:0003056,1.91e-13,49;UBERON:0000020,7.46e-13,12;UBERON:0001032,7.46e-13,12;UBERON:0004456,7.46e-13,12;UBERON:0000033,7.38e-12,13;UBERON:0005085,7.38e-12,13;UBERON:0002346,5.68e-10,64;UBERON:0003075,5.68e-10,64;UBERON:0007284,5.68e-10,64;UBERON:0002619,1.42e-08,17;UBERON:0010371,1.44e-08,73;UBERON:0004121,1.41e-07,95;UBERON:0000924,1.41e-07,95;UBERON:0006601,1.41e-07,95;UBERON:0000029,3.67e-07,1;UBERON:0001097,3.67e-07,1;UBERON:0003968,3.67e-07,1;UBERON:0001467,3.67e-07,1;UBERON:0000956,6.42e-07,21;UBERON:0001869,6.42e-07,21;UBERON:0000203,6.42e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0.52091337055676,0,0,0,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.705532242814229,0,0,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0,0.251308704225729,0.695297280769106,0.767146371990992,0.41557608911912,0.486723789203273,0,0,0,4.20883711772948,0,0,0,0.30140963567143,2.10913147369116,4.74020765053944,3.84177070694888,11.1242449417777,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,1.03135543248187,1.02131881726136,0,0,0,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,2.29158205375759,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,0,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.182927972872773,0.526139422875686,0,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:73558906..73558910,+ | |||
}} |
Latest revision as of 16:17, 4 August 2015
Short description: | p@chr10:73558906..73558910, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:73558906..73558910, + |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.72e-17 | 9 |
camera-type eye | 3.72e-17 | 9 |
simple eye | 3.72e-17 | 9 |
immature eye | 3.72e-17 | 9 |
ocular region | 3.72e-17 | 9 |
visual system | 3.72e-17 | 9 |
face | 3.72e-17 | 9 |
optic cup | 3.72e-17 | 9 |
optic vesicle | 3.72e-17 | 9 |
eye primordium | 3.72e-17 | 9 |
occipital lobe | 1.28e-14 | 10 |
visual cortex | 1.28e-14 | 10 |
neocortex | 1.28e-14 | 10 |
subdivision of head | 4.99e-14 | 11 |
pre-chordal neural plate | 1.91e-13 | 49 |
sense organ | 7.46e-13 | 12 |
sensory system | 7.46e-13 | 12 |
entire sense organ system | 7.46e-13 | 12 |
head | 7.38e-12 | 13 |
ectodermal placode | 7.38e-12 | 13 |
neurectoderm | 5.68e-10 | 64 |
neural plate | 5.68e-10 | 64 |
presumptive neural plate | 5.68e-10 | 64 |
regional part of cerebral cortex | 1.42e-08 | 17 |
ecto-epithelium | 1.44e-08 | 73 |
ectoderm-derived structure | 1.41e-07 | 95 |
ectoderm | 1.41e-07 | 95 |
presumptive ectoderm | 1.41e-07 | 95 |
lymph node | 3.67e-07 | 1 |
axillary lymph node | 3.67e-07 | 1 |
peripheral lymph node | 3.67e-07 | 1 |
shoulder | 3.67e-07 | 1 |
cerebral cortex | 6.42e-07 | 21 |
cerebral hemisphere | 6.42e-07 | 21 |
pallium | 6.42e-07 | 21 |