FFCP PHASE1:Hg19::chr2:242089677..242089695,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17270 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RG2 | |||
|association_with_transcript=0bp_to_ENST00000405260_5end | |||
|cluster_id=chr2:242089677..242089695,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_10_at_PASK_5end | |||
|id=chr2:242089677..242089695,- | |||
|ontology_enrichment_celltype=CL:0000838!1.64e-12!52;CL:0000542!4.58e-12!53;CL:0000051!4.58e-12!53;CL:0000084!9.66e-09!25;CL:0000827!9.66e-09!25;CL:0000624!4.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.59e-12;6!CL:0000895;5.30e-09;1!CL:0000084;1.69e-07;25!CL:0000791;5.51e-07;18!CL:0000789;5.51e-07;18!CL:0002419;5.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.50e-12,6;CL:0000810,2.40e-09,1;CL:0000895,2.40e-09,1;CL:0002436,2.40e-09,1;CL:0002427,2.40e-09,1;CL:0002428,2.40e-09,1;CL:0002429,2.40e-09,1;CL:0002433,2.40e-09,1;CL:0002431,2.40e-09,1;CL:0002432,2.40e-09,1;CL:0000084,1.51e-07,25;CL:0000827,1.51e-07,25;CL:0000791,4.33e-07,18;CL:0000789,4.33e-07,18;CL:0002420,4.33e-07,18;CL:0002419,4.33e-07,18;CL:0000790,4.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;5.30e-09;1!CL:0000790;5.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;5.30e-09;1!DOID:0050177;5.30e-09;1!DOID:0050427;5.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.91e-09,1;DOID:0050177,4.91e-09,1;DOID:0050427,4.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.44e-13!34;UBERON:0002791!1.02e-12!33;UBERON:0001869!1.35e-12!32;UBERON:0007023!2.44e-12!115;UBERON:0002780!2.82e-12!41;UBERON:0001890!2.82e-12!41;UBERON:0006240!2.82e-12!41;UBERON:0002020!3.51e-12!34;UBERON:0003528!3.51e-12!34;UBERON:0003080!9.16e-12!42;UBERON:0001049!2.13e-10!57;UBERON:0005068!2.13e-10!57;UBERON:0006241!2.13e-10!57;UBERON:0007135!2.13e-10!57;UBERON:0000955!1.29e-09!69;UBERON:0006238!1.29e-09!69;UBERON:0002616!6.99e-09!59;UBERON:0002619!7.88e-09!22;UBERON:0003056!1.34e-08!61;UBERON:0001017!3.19e-08!82;UBERON:0009663!7.08e-08!7;UBERON:0005743!8.34e-08!86;UBERON:0000073!8.79e-08!94;UBERON:0001016!8.79e-08!94;UBERON:0001950!1.44e-07!20;UBERON:0002420!1.92e-07!9;UBERON:0007245!1.92e-07!9;UBERON:0010009!1.92e-07!9;UBERON:0010011!1.92e-07!9;UBERON:0000454!1.92e-07!9;UBERON:0000956!3.33e-07!25;UBERON:0000203!3.33e-07!25;UBERON:0002308!3.65e-07!9;UBERON:0000125!3.65e-07!9;UBERON:0000153!4.30e-07!129;UBERON:0007811!4.30e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;7.50e-19;4!UBERON:0002435;7.50e-19;4!UBERON:0000204;7.50e-19;4!UBERON:0005383;7.89e-12;3!UBERON:0005382;7.89e-12;3!UBERON:0009663;5.30e-11;7!UBERON:0001869;1.19e-09;32!UBERON:0001874;1.73e-09;1!UBERON:0001882;2.04e-09;1!UBERON:0005403;2.04e-09;1!UBERON:0002022;5.30e-09;1!UBERON:0007190;5.30e-09;1!UBERON:0001893;6.19e-09;34!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0002780;4.28e-08;41!UBERON:0001890;4.28e-08;41!UBERON:0002791;5.44e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.11e-19,4;UBERON:0002435,7.11e-19,4;UBERON:0000204,7.11e-19,4;UBERON:0010082,7.11e-19,4;UBERON:0005383,7.91e-12,3;UBERON:0005382,7.91e-12,3;UBERON:0009663,5.14e-11,7;UBERON:0001869,1.00e-10,32;UBERON:0002780,1.01e-10,41;UBERON:0001890,1.01e-10,41;UBERON:0003080,1.01e-10,41;UBERON:0006240,1.01e-10,41;UBERON:0001893,4.56e-10,34;UBERON:0001874,1.74e-09,1;UBERON:0001882,1.89e-09,1;UBERON:0005403,1.89e-09,1;UBERON:0002022,3.88e-09,1;UBERON:0007190,7.85e-09,1;UBERON:0002420,1.14e-08,9;UBERON:0000125,1.14e-08,9;UBERON:0007245,1.14e-08,9;UBERON:0002308,1.14e-08,9;UBERON:0010009,1.14e-08,9;UBERON:0010011,1.14e-08,9;UBERON:0000454,1.14e-08,9;UBERON:0000073,4.23e-08,53;UBERON:0002616,4.23e-08,53;UBERON:0002791,5.00e-08,32;UBERON:0001049,1.29e-07,56;UBERON:0005068,1.29e-07,56;UBERON:0006241,1.29e-07,56;UBERON:0007135,1.29e-07,56;UBERON:0003528,1.54e-07,34;UBERON:0002020,1.54e-07,34;UBERON:0003056,6.46e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.57470412614962,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,0,0,0.786839080455332,1.17903228824749,1.64481199199607,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0.869409257205157,0.593146252648242,1.60524496853828,0,0,1.91610246800961,1.71813722741315,1.26509846009751,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,1.20964045934839,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0.364295288292542,0.370784442784429,0.97364218096405,0.696518949197069,0.797747763113191,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0.265059536642971,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0.985153801009636,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.960548020230999,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0.980160863924127,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0.329607748453519,2.11125408127993,0,0.276283915531148,0.755798243562828,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,0,0,0.61221999997337,0,0,0,0.472775363535873,0,0,0,0.885741385813839,8.20055782652774,0,0,0,0.658156191461918,0.21787692703798,0.557694977114413,0.153900517007594,0,0.69169171316418,0.359030577639089,0,0,0,0,0,0,0,0,0,0.167821586975843,0.37950746544837,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.353830258013357,0,0.889563386041866,0.247127877893006,0.313265848516366,0.202203398942031,0,0.937057782901357,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0.0730893170861856,0.246346371159628,0,0,0,0.137041924646751,0,0.316553979779393,0,0,0,0,0.432271251462318,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.236349546921671,0.494495150286999,0.337017719270924,0.0984274815147488,0.423366660328922,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0.2249738915515,2.32140586367385,1.39723980313457,0.335434687599266,0,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0.197611631897944,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0.244052529803926,1.001527445652,0.573409195690071,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0.184105950251841,0.139879507719444,0,0,0,0.314531883711793,0.109209638192014,0,0,0,0,0,0,0,0,0,2.56916900385838,0,0.957803154342908,0.82046545696302,0,0.829887029570615,0.484426936895553,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.443568258651136,1.14813893851271,0.781078098613847,1.03343398250592,0.887821342714695,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0.920818829879887,0,0,0.706437835654626,3.92788974790005,0,0,0,0,0.142953088353313,0.316027223465453,0.581207126840626,0,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0.223710863595585,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0,1.05673990496671,0.23152247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| |||
|short_description=p10@PASK | |||
}} |
Latest revision as of 09:46, 16 September 2015
Short description: | p10@PASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PASK_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000405260_5end |
EntrezGene: | PASK |
HGNC: | 17270 |
UniProt: | Q96RG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.50e-12 | 6 |
CD4-positive, alpha-beta thymocyte | 2.40e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.40e-09 | 1 |
mature CD4 single-positive thymocyte | 2.40e-09 | 1 |
resting double-positive thymocyte | 2.40e-09 | 1 |
double-positive blast | 2.40e-09 | 1 |
CD69-positive double-positive thymocyte | 2.40e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.40e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.40e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.40e-09 | 1 |
T cell | 1.51e-07 | 25 |
pro-T cell | 1.51e-07 | 25 |
mature alpha-beta T cell | 4.33e-07 | 18 |
alpha-beta T cell | 4.33e-07 | 18 |
immature T cell | 4.33e-07 | 18 |
mature T cell | 4.33e-07 | 18 |
immature alpha-beta T cell | 4.33e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.11e-19 | 4 |
striatum | 7.11e-19 | 4 |
ventral part of telencephalon | 7.11e-19 | 4 |
future corpus striatum | 7.11e-19 | 4 |
caudate-putamen | 7.91e-12 | 3 |
dorsal striatum | 7.91e-12 | 3 |
telencephalic nucleus | 5.14e-11 | 7 |
cerebral hemisphere | 1.00e-10 | 32 |
regional part of forebrain | 1.01e-10 | 41 |
forebrain | 1.01e-10 | 41 |
anterior neural tube | 1.01e-10 | 41 |
future forebrain | 1.01e-10 | 41 |
telencephalon | 4.56e-10 | 34 |
putamen | 1.74e-09 | 1 |
nucleus accumbens | 1.89e-09 | 1 |
ventral striatum | 1.89e-09 | 1 |
insula | 3.88e-09 | 1 |
paracentral gyrus | 7.85e-09 | 1 |
basal ganglion | 1.14e-08 | 9 |
neural nucleus | 1.14e-08 | 9 |
nuclear complex of neuraxis | 1.14e-08 | 9 |
nucleus of brain | 1.14e-08 | 9 |
aggregate regional part of brain | 1.14e-08 | 9 |
collection of basal ganglia | 1.14e-08 | 9 |
cerebral subcortex | 1.14e-08 | 9 |
regional part of nervous system | 4.23e-08 | 53 |
regional part of brain | 4.23e-08 | 53 |
regional part of telencephalon | 5.00e-08 | 32 |
neural tube | 1.29e-07 | 56 |
neural rod | 1.29e-07 | 56 |
future spinal cord | 1.29e-07 | 56 |
neural keel | 1.29e-07 | 56 |
brain grey matter | 1.54e-07 | 34 |
gray matter | 1.54e-07 | 34 |
pre-chordal neural plate | 6.46e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.91e-09 | 1 |
monogenic disease | 4.91e-09 | 1 |
xeroderma pigmentosum | 4.91e-09 | 1 |