FFCP PHASE1:Mm9::chr11:116713742..116713770,-: Difference between revisions
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{{FFCP|EntrezGene=20382|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-209bp_to_ENSMUST00000138484_5end|description=CAGE_peak_2_at_Srsf2_5end|id=chr11:116713742..116713770,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.62e-11!73;UBERON:0005743!3.62e-11!73;UBERON:0000073!2.58e-10!75;UBERON:0001016!2.58e-10!75;UBERON:0004121!7.67e-09!102;UBERON:0000924!7.67e-09!102;UBERON:0006601!7.67e-09!102;UBERON:0001049!8.24e-09!52;UBERON:0005068!8.24e-09!52;UBERON:0006241!8.24e-09!52;UBERON:0007135!8.24e-09!52;UBERON:0002616!1.30e-07!49;UBERON:0000955!1.42e-07!50;UBERON:0006238!1.42e-07!50;UBERON:0003080!7.30e-07!40;UBERON:0000033!9.25e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-11,73;UBERON:0001016,8.04e-11,75;UBERON:0004121,1.17e-09,95;UBERON:0000924,1.17e-09,95;UBERON:0006601,1.17e-09,95;UBERON:0001049,2.89e-09,52;UBERON:0005068,2.89e-09,52;UBERON:0006241,2.89e-09,52;UBERON:0007135,2.89e-09,52;UBERON:0000073,9.08e-09,54;UBERON:0002616,3.67e-08,46;UBERON:0000955,4.11e-08,47;UBERON:0006238,4.11e-08,47;UBERON:0010371,1.52e-07,73;UBERON:0002346,2.11e-07,64;UBERON:0003075,2.11e-07,64;UBERON:0007284,2.11e-07,64;UBERON:0003080,3.06e-07,40;UBERON:0002780,5.64e-07,39;UBERON:0001890,5.64e-07,39;UBERON:0006240,5.64e-07,39|phase1_expression=2.88267924788629,2.79180326111489,13.1949779422965,7.86406949397758,6.51164448930251,2.18243053485457,2.10251376535973,2.45334314538995,0.563154888606667,0,0,0.159544317990673,0.856003649656029,0.611942816932982,0.666219523631325,0.202475267389826,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,3.82694805679814,0.397163804803541,0.522399578277871,2.07990149631429,3.67054849707472,8.03924749761028,4.73838195774982,3.66301095566011,4.56056206695297,3.52842181663903,2.66076612786366,0,0,0,0,0.664938581433969,0,23.0192396905299,26.5654017138092,29.3173296625327,35.2938892818609,34.1522742479223,36.8987868303677,1.1330713617802,0.709638518536602,1.46837401729345,8.60630478782843,1.52617609466313,3.95435128922049,5.24960727500565,3.21968769738334,4.31257693094915,0.671130424230945,0,0,0.771778308107841,0.573066879877513,1.54701627683233,4.04632921719196,2.11596391708813,4.43681982454325,1.0165335962074,2.66788438833342,4.49949858640699,2.96659908770092,0.7104801149461,4.79360176829448,7.30014780110954,2.90330914463737,1.75507719831198,1.89292465216244,3.71346279724945,2.65042249141936,2.08234358665422,2.20444583341944,5.51531271966013,2.20231761998777,1.91531007127782,0.921639199537461,3.42904348098504,4.20843160571084,1.04182674111352,2.51264699101243,1.12552522006336,2.13917546887534,2.94628585473668,1.28134512719193,2.23679334990361,0.302904773332736,1.13357340160178,1.15945795480671,0.860423876981386,0,0.539703191637817,0,0.896053774194671,1.54488862144927,0.852151612890289,0.519572009205738,0.35333957451034,4.92951969218382,0,0,0,0.649473123033642,1.26679932737549,1.01104889002957,1.82694207550496,2.07150306917737,3.11728492036132,0.693941307064543,0.304465478312141,0.922461989024234,1.80867168663147,3.41007250693544,1.88499886994513,4.20231445148436,1.59059292611903,5.30766331169925,0.808834249737046,1.76673214768315,1.93950101254089,0,3.51336956413857,5.86450779077674,4.08731288333746,0.239630249011841,0.599902730993408,0.127070227073065,2.69623150928681,3.66000482254901,3.5183218591602,1.91206752211504,2.30143911597297,3.1168206683934,1.62241263067758,2.85150218780886,2.23932547098167,0.252722758433675,1.68353484709179,0.520481771850815,1.37941262660084,0.720248519221397,1.80845781402858,1.49680298132921,1.15302348256365,1.12442069471675,2.32833033665114,0.646703978798527,0.756424320671277,1.58356011747554,1.97276159184817,1.39023624612799,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0.284163499395593,0.414251545071004,0.703578179943289,0.720248245844059,0.946978942340841,0.196764231747404,0.925602677324269,0.697601834251224,0.804820204198858,2.21854150497622,0.987359099480883,0.985004784474571,1.05389452409612,0.730999937126662,0.219550115291051,2.14730270016595,2.10289948564127,2.36680608472354,5.94753809370836,1.85115396664481,0.853153002140936,0.696710015581316,0.38660238396628,0.80673409849337,2.2237804384487,0.951128130562796,4.2707615539006,0.988193728344065,2.26201687920243,1.98956472041151,2.53453313254856,0.898819408654221,2.37751854862164,4.18196673834171,1.13800740571849,1.37098215131675,1.1270773567308,0.814605311381257,1.74557238450863,2.31448205638051,1.20149420536089,1.03327103585722,1.09899109488962,1.60416313098341,0.296452627087149,0.333690211432188,0.393117990226406,0.899448449539415,0.811440485554012,0.482354319504834,0.763877555344259,2.30156909960649,1.45921704097532,1.37280706594041,4.31304619582064,1.11642284300551,0.312037673114561,1.51547326768267,0.358794827043824,2.8946611281802,5.91210208533135,0.947457058852424,0.814824882210129,1.35796068620151,0.938760993154008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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20382 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-209bp_to_ENSMUST00000138484_5end | |||
|cluster_id=chr11:116713742..116713770,- | |||
|description=CAGE_peak_2_at_Srsf2_5end | |||
|id=chr11:116713742..116713770,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.62e-11!73;UBERON:0005743!3.62e-11!73;UBERON:0000073!2.58e-10!75;UBERON:0001016!2.58e-10!75;UBERON:0004121!7.67e-09!102;UBERON:0000924!7.67e-09!102;UBERON:0006601!7.67e-09!102;UBERON:0001049!8.24e-09!52;UBERON:0005068!8.24e-09!52;UBERON:0006241!8.24e-09!52;UBERON:0007135!8.24e-09!52;UBERON:0002616!1.30e-07!49;UBERON:0000955!1.42e-07!50;UBERON:0006238!1.42e-07!50;UBERON:0003080!7.30e-07!40;UBERON:0000033!9.25e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-11,73;UBERON:0001016,8.04e-11,75;UBERON:0004121,1.17e-09,95;UBERON:0000924,1.17e-09,95;UBERON:0006601,1.17e-09,95;UBERON:0001049,2.89e-09,52;UBERON:0005068,2.89e-09,52;UBERON:0006241,2.89e-09,52;UBERON:0007135,2.89e-09,52;UBERON:0000073,9.08e-09,54;UBERON:0002616,3.67e-08,46;UBERON:0000955,4.11e-08,47;UBERON:0006238,4.11e-08,47;UBERON:0010371,1.52e-07,73;UBERON:0002346,2.11e-07,64;UBERON:0003075,2.11e-07,64;UBERON:0007284,2.11e-07,64;UBERON:0003080,3.06e-07,40;UBERON:0002780,5.64e-07,39;UBERON:0001890,5.64e-07,39;UBERON:0006240,5.64e-07,39 | |||
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| |||
|short_description=p2@Srsf2 | |||
}} |
Latest revision as of 00:44, 27 September 2015
Short description: | p2@Srsf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srsf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -209bp_to_ENSMUST00000138484_5end |
EntrezGene: | Srsf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.29e-11 | 73 |
nervous system | 8.04e-11 | 75 |
ectoderm-derived structure | 1.17e-09 | 95 |
ectoderm | 1.17e-09 | 95 |
presumptive ectoderm | 1.17e-09 | 95 |
neural tube | 2.89e-09 | 52 |
neural rod | 2.89e-09 | 52 |
future spinal cord | 2.89e-09 | 52 |
neural keel | 2.89e-09 | 52 |
regional part of nervous system | 9.08e-09 | 54 |
regional part of brain | 3.67e-08 | 46 |
brain | 4.11e-08 | 47 |
future brain | 4.11e-08 | 47 |
ecto-epithelium | 1.52e-07 | 73 |
neurectoderm | 2.11e-07 | 64 |
neural plate | 2.11e-07 | 64 |
presumptive neural plate | 2.11e-07 | 64 |
anterior neural tube | 3.06e-07 | 40 |
regional part of forebrain | 5.64e-07 | 39 |
forebrain | 5.64e-07 | 39 |
future forebrain | 5.64e-07 | 39 |