FFCP PHASE1:Hg19::chr2:98330332..98330376,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:98330332..98330376,+ | |||
|coexpression_cluster_id=C2205 | |||
|description=CAGE_peak_at_chr2:98330332..98330376,+ | |||
|id=chr2:98330332..98330376,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.17e-29!18;CL:0000789!4.17e-29!18;CL:0002420!4.17e-29!18;CL:0002419!4.17e-29!18;CL:0000790!4.17e-29!18;CL:0000084!1.78e-27!25;CL:0000827!1.78e-27!25;CL:0000625!2.84e-24!11;CL:0000838!1.53e-16!52;CL:0000542!4.20e-16!53;CL:0000051!4.20e-16!53;CL:0000738!9.65e-15!140;CL:0002087!1.51e-13!119;CL:0000037!1.10e-10!172;CL:0000566!1.10e-10!172;CL:0002031!8.83e-10!124;CL:0000988!1.63e-09!182;CL:0000623!3.01e-08!3;CL:0000825!3.01e-08!3;CL:0000767!7.09e-08!3;CL:0000842!7.75e-08!3;CL:0002032!8.08e-08!165;CL:0000837!8.08e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.80e-57;11!CL:0000791;2.70e-47;18!CL:0000789;2.70e-47;18!CL:0002419;2.70e-47;18!CL:0000084;1.55e-38;25!CL:0000623;8.11e-18;3!CL:0000767;6.48e-17;3!CL:0000226;7.82e-17;3!CL:0000842;7.82e-17;3!CL:0000542;4.78e-14;53!CL:0002393;2.51e-08;6!CL:0002397;2.51e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.81e-57,11;CL:0000791,2.65e-47,18;CL:0000789,2.65e-47,18;CL:0002420,2.65e-47,18;CL:0002419,2.65e-47,18;CL:0000790,2.65e-47,18;CL:0000084,1.58e-38,25;CL:0000827,1.58e-38,25;CL:0000838,4.87e-26,52;CL:0000542,1.78e-25,53;CL:0000051,1.78e-25,53;CL:0000738,8.71e-21,136;CL:0002087,2.86e-19,115;CL:0000623,8.11e-18,3;CL:0000825,8.11e-18,3;CL:0000767,6.48e-17,3;CL:0000226,8.04e-17,3;CL:0000842,8.04e-17,3;CL:0000037,8.68e-16,168;CL:0000988,1.05e-14,177;CL:0002031,3.51e-13,120;CL:0002032,2.20e-12,161;CL:0000837,2.20e-12,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-47;18!CL:0000051;4.78e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.92e-20!15;UBERON:0000179!4.92e-20!15;UBERON:0000463!4.92e-20!15;UBERON:0002390!8.10e-08!102;UBERON:0003061!8.10e-08!102;UBERON:0002193!3.61e-07!112;UBERON:0004177!6.76e-07!7;UBERON:0007023!7.70e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.39e-48;15!UBERON:0000179;2.39e-48;15!UBERON:0000463;2.39e-48;15!UBERON:0002390;2.28e-20;32!UBERON:0002193;1.53e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.34e-48,15;UBERON:0000179,2.34e-48,15;UBERON:0000463,2.34e-48,15;UBERON:0002390,4.07e-10,98;UBERON:0003061,4.07e-10,98;UBERON:0002193,6.93e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29382842958246,8.82807615623589,7.43117391917165,0,0,0,0,0,0,4.43196326825502,4.61252229181326,5.20826089718044,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.80254281490768,0,0,3.14408610199332,0.822405995998037,0.167186495390678,0,0,0,0.668462741311041,0.589211814949674,0.443067789167242,0.270803863765016,0.768547918354051,0.390178042679635,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.906474741580529,4.21542542962113,0.68725489096526,2.02415753615602,1.91139248594458,6.51083453856419,7.60361635558699,7.37818083481087,8.44711633619161,4.99722906209383,6.39298580518846,9.85353596305256,12.0964045934839,13.6394499849589,6.51709817472595,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,22.6585374232216,22.2096402105303,26.4386654736282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6165768359324,6.25571182373989,11.6333038005754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,3.55213326462519,1.52927441428475,7.97506062043828,7.38518503919146,7.4045209155515,3.24236655596359,3.7802200606668,11.8968776444141,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.375935671919414,0.193373663920732,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,52.5798779197464,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:98330332..98330376,+ | |||
}} |
Latest revision as of 13:28, 29 July 2015
Short description: | p@chr2:98330332..98330376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:98330332..98330376, + |
Coexpression cluster: | C2205_teratocarcinoma_Natural_CD8_mycosis_cord_diffuse_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.81e-57 | 11 |
mature alpha-beta T cell | 2.65e-47 | 18 |
alpha-beta T cell | 2.65e-47 | 18 |
immature T cell | 2.65e-47 | 18 |
mature T cell | 2.65e-47 | 18 |
immature alpha-beta T cell | 2.65e-47 | 18 |
T cell | 1.58e-38 | 25 |
pro-T cell | 1.58e-38 | 25 |
lymphoid lineage restricted progenitor cell | 4.87e-26 | 52 |
lymphocyte | 1.78e-25 | 53 |
common lymphoid progenitor | 1.78e-25 | 53 |
leukocyte | 8.71e-21 | 136 |
nongranular leukocyte | 2.86e-19 | 115 |
natural killer cell | 8.11e-18 | 3 |
pro-NK cell | 8.11e-18 | 3 |
basophil | 6.48e-17 | 3 |
single nucleate cell | 8.04e-17 | 3 |
mononuclear cell | 8.04e-17 | 3 |
hematopoietic stem cell | 8.68e-16 | 168 |
hematopoietic cell | 1.05e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 3.51e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.20e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.34e-48 | 15 |
haemolymphatic fluid | 2.34e-48 | 15 |
organism substance | 2.34e-48 | 15 |
hematopoietic system | 4.07e-10 | 98 |
blood island | 4.07e-10 | 98 |
hemolymphoid system | 6.93e-09 | 108 |