FFCP PHASE1:Hg19::chr3:141106608..141106618,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26636 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENST00000514251_5end | |||
|cluster_id=chr3:141106608..141106618,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_61_at_ZBTB38_5end | |||
|id=chr3:141106608..141106618,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.11e-27;6!CL:0000404;3.11e-27;6!CL:0000047;5.15e-21;2!CL:0002319;5.54e-14;25!CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.86e-45,8;CL:0000540,2.72e-27,6;CL:0000031,2.72e-27,6;CL:0000404,2.72e-27,6;CL:0002319,5.18e-14,25;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.11e-27;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.83e-37!34;UBERON:0002020!2.51e-37!34;UBERON:0003528!2.51e-37!34;UBERON:0002616!3.41e-37!59;UBERON:0001869!2.39e-36!32;UBERON:0001017!4.53e-36!82;UBERON:0001049!9.34e-36!57;UBERON:0005068!9.34e-36!57;UBERON:0006241!9.34e-36!57;UBERON:0007135!9.34e-36!57;UBERON:0002791!7.88e-35!33;UBERON:0002619!1.91e-34!22;UBERON:0005743!4.83e-34!86;UBERON:0002780!1.28e-33!41;UBERON:0001890!1.28e-33!41;UBERON:0006240!1.28e-33!41;UBERON:0001950!1.78e-33!20;UBERON:0003080!1.06e-32!42;UBERON:0000955!1.19e-32!69;UBERON:0006238!1.19e-32!69;UBERON:0000073!4.30e-30!94;UBERON:0001016!4.30e-30!94;UBERON:0000956!5.33e-30!25;UBERON:0000203!5.33e-30!25;UBERON:0003075!2.11e-23!86;UBERON:0007284!2.11e-23!86;UBERON:0002346!4.67e-22!90;UBERON:0000033!5.41e-21!123;UBERON:0003056!6.38e-21!61;UBERON:0000200!7.44e-21!6;UBERON:0000153!1.18e-19!129;UBERON:0007811!1.18e-19!129;UBERON:0004121!2.68e-19!169;UBERON:0000924!1.20e-18!173;UBERON:0006601!1.20e-18!173;UBERON:0007023!1.24e-18!115;UBERON:0001871!1.21e-15!7;UBERON:0002771!1.91e-11!3;UBERON:0000988!3.29e-10!3;UBERON:0000025!6.92e-10!194;UBERON:0002680!3.41e-09!9;UBERON:0001895!3.41e-09!9;UBERON:0010092!3.41e-09!9;UBERON:0002308!8.25e-09!9;UBERON:0000125!8.25e-09!9;UBERON:0000064!1.21e-08!219;UBERON:0004111!1.48e-08!241;UBERON:0000369!6.16e-08!4;UBERON:0002435!6.16e-08!4;UBERON:0000204!6.16e-08!4;UBERON:0010082!6.16e-08!4;UBERON:0001870!6.77e-08!2;UBERON:0000477!7.51e-08!286;UBERON:0002148!2.53e-07!2;UBERON:0009662!2.53e-07!2;UBERON:0002021!8.20e-07!5;UBERON:0004733!8.21e-07!12;UBERON:0002028!8.21e-07!12;UBERON:0007277!8.21e-07!12;UBERON:0000349!9.62e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0001871;5.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0001017,2.75e-08,81;UBERON:0001016,1.56e-07,89;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,1.84267891867784,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0.562677665642051,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.995213339381022,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70675732104301,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0.192687675289379,0,0.319267718114302,0,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0.455324382702595,0,0.460935950223117,0,0.135939465953663,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p61@ZBTB38 | |||
}} |
Latest revision as of 03:24, 25 September 2015
Short description: | p61@ZBTB38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_61_at_ZBTB38_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -35bp_to_ENST00000514251_5end |
EntrezGene: | ZBTB38 |
HGNC: | 26636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.86e-45 | 8 |
neuron | 2.72e-27 | 6 |
neuroblast | 2.72e-27 | 6 |
electrically signaling cell | 2.72e-27 | 6 |
neural cell | 5.18e-14 | 25 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
central nervous system | 2.75e-08 | 81 |
nervous system | 1.56e-07 | 89 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |