FFCP PHASE1:Hg19::chr3:155860767..155860786,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |||
|TSSclassifier=strong | |||
|UniProt=B3KPZ4,Q14722 | |||
|association_with_transcript=16bp_to_ENST00000471742,NM_003471,uc003fas.2_5end | |||
|cluster_id=chr3:155860767..155860786,+ | |||
|coexpression_cluster_id=C944 | |||
|description=CAGE_peak_3_at_KCNAB1_5end | |||
|id=chr3:155860767..155860786,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.29e-11;65!UBERON:0007297;1.11e-08;2!UBERON:0006965;2.12e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-77!115;UBERON:0001049!1.07e-17!57;UBERON:0005068!1.07e-17!57;UBERON:0006241!1.07e-17!57;UBERON:0007135!1.07e-17!57;UBERON:0003075!7.01e-16!86;UBERON:0007284!7.01e-16!86;UBERON:0002346!9.06e-15!90;UBERON:0002616!4.83e-14!59;UBERON:0005743!3.46e-13!86;UBERON:0001017!3.87e-13!82;UBERON:0003080!1.77e-12!42;UBERON:0000153!6.84e-12!129;UBERON:0007811!6.84e-12!129;UBERON:0000955!7.29e-12!69;UBERON:0006238!7.29e-12!69;UBERON:0001893!2.64e-11!34;UBERON:0002780!2.76e-11!41;UBERON:0001890!2.76e-11!41;UBERON:0006240!2.76e-11!41;UBERON:0002020!2.84e-11!34;UBERON:0003528!2.84e-11!34;UBERON:0000073!3.52e-11!94;UBERON:0001016!3.52e-11!94;UBERON:0002298!5.29e-11!8;UBERON:0000033!2.38e-10!123;UBERON:0002791!2.41e-10!33;UBERON:0004111!3.80e-10!241;UBERON:0004121!2.05e-09!169;UBERON:0001869!2.50e-09!32;UBERON:0000062!3.28e-09!511;UBERON:0000477!4.94e-09!286;UBERON:0000924!5.84e-09!173;UBERON:0006601!5.84e-09!173;UBERON:0000481!7.16e-09!347;UBERON:0002619!3.19e-08!22;UBERON:0003056!5.30e-08!61;UBERON:0001044!1.18e-07!6;UBERON:0003293!1.18e-07!6;UBERON:0003294!1.18e-07!6;UBERON:0010047!1.18e-07!6;UBERON:0000167!1.18e-07!6;UBERON:0006947!1.61e-07!3;UBERON:0004054!1.61e-07!3;UBERON:0000956!5.48e-07!25;UBERON:0000203!5.48e-07!25;UBERON:0000475!7.43e-07!365;UBERON:0003978!8.55e-07!3;UBERON:0009751!8.55e-07!3;UBERON:0000946!8.55e-07!3;UBERON:0002523!8.55e-07!3;UBERON:0005983!8.55e-07!3;UBERON:0002165!8.55e-07!3;UBERON:0002062!8.55e-07!3;UBERON:0007280!8.55e-07!3;UBERON:0000468!8.95e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.49e-12;3!UBERON:0004054;5.49e-12;3!UBERON:0005904;4.33e-09;4!UBERON:0002360;8.52e-09;2!UBERON:0000094;8.52e-09;2!UBERON:0010743;8.52e-09;2!UBERON:0007023;1.48e-08;114!UBERON:0003135;1.81e-08;11!UBERON:0003127;5.24e-08;2!UBERON:0000341;5.24e-08;2!UBERON:0005090;1.01e-07;2!UBERON:0001630;1.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.67e-37,114;UBERON:0006947,4.26e-12,3;UBERON:0004054,4.26e-12,3;UBERON:0005904,3.59e-09,4;UBERON:0002360,9.21e-09,2;UBERON:0000094,9.21e-09,2;UBERON:0010743,9.21e-09,2;UBERON:0003135,1.59e-08,11;UBERON:0003127,3.01e-08,2;UBERON:0005090,4.80e-08,2;UBERON:0001630,4.80e-08,2;UBERON:0000341,5.16e-08,2;UBERON:0003103,3.69e-07,68 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0392279551986,0,0,0,0,0,0,0,0.281338832821026,0,0,0,14.345855154077,1.10513566212459,0,0,0,0,0,0,0,4.04437963111428,0,0,0,0.74214478529481,0,0,0,6.52499617891314,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,4.60709334023342,0,0,9.31098127895945,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21143911258348,1.22206028986725,0,0,0,0.539209063845416,1.60515529459758,0,0,0,0,2.76209081994573,1.20990716048664,0,4.04394109622323,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,2.03676934625681,0,2.48578814858586,0,0,0.50648636764703,0,0,4.4825128895264,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,4.35404805622199,1.43574604915363,0.199679000498991,0,1.56220020209311,3.02325626190268,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.242998226632099,0,1.49730843868477,0.891727998294968,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,2.13574825135389,1.41483874589699,0.414239055347196,0,0,0,0,1.08803560673895,1.5041393641362,0.919036730290385,0.327872630709804,0,0,0,0,0,0.554645257684261,2.42175971471395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.207471757392654,0.968853873791107,0,0,0,0,0,0,0,0,1.35378591028663,0,0.781514011233092,0,0,0,0.405225507710368,0,0.413373593002368,0.443910671357348,0,0.548257766857182,13.3977018165109,0,0,0,1.3451348888753,0.606965604236632,0,0.354809480650555,0,0,0.951576261675644,0.263091094251396,0,0,4.4741062924793,0,0,1.82631744101899,0,0,0.643288897589907,0,0,0,0,0,0.51215543128185,1.38251932362818,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0,0,1.94228651156368,1.02662806856247,0,0.971421986118279,0,0,0,0,0,0,1.54348316215889,0,0,3.92237314806249,0,0.785233868459781,0,1.2679671827502,0,0.187967835959707,0,0,0,0,0,0,1.37618785021362,0.716697915757256,0,0.339957450954573,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,3.48582011803901,0,0,0,1.49263787330687,2.14257988317366,0,0.248298857183432,0,1.40023748211963,3.23387502333151,2.8303177226605,1.36893320434112,0.336760265072938,2.58199939413635,1.99596213927608,0,0,0,0,7.03922827210363,3.78948476966886,0.813792356631477,4.66029741929859,1.20764276154616,0 | |||
|short_description=p3@KCNAB1 | |||
}} |
Latest revision as of 05:54, 16 September 2015
Short description: | p3@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNAB1_5end |
Coexpression cluster: | C944_adipose_lung_cervix_epididymis_testis_aorta_breast |
Association with transcript: | 16bp_to_ENST00000471742, NM_003471, uc003fas.2_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | B3KPZ4Q14722 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.67e-37 | 114 |
male genital duct | 4.26e-12 | 3 |
internal male genitalia | 4.26e-12 | 3 |
duct of male reproductive system | 3.59e-09 | 4 |
meninx | 9.21e-09 | 2 |
membrane organ | 9.21e-09 | 2 |
meningeal cluster | 9.21e-09 | 2 |
male reproductive organ | 1.59e-08 | 11 |
open tracheal system trachea | 3.01e-08 | 2 |
muscle structure | 4.80e-08 | 2 |
muscle organ | 4.80e-08 | 2 |
throat | 5.16e-08 | 2 |
compound organ | 3.69e-07 | 68 |