FFCP PHASE1:Hg19::chr3:161089270..161089273,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24045 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NFR3 | |||
|association_with_transcript=15bp_to_ENST00000497137_5end | |||
|cluster_id=chr3:161089270..161089273,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_3_at_SPTSSB_5end | |||
|id=chr3:161089270..161089273,- | |||
|ontology_enrichment_celltype=CL:0002076!3.72e-11!43;CL:0002231!3.03e-09!3;CL:0000312!1.42e-08!5;CL:0002251!2.15e-07!21;CL:0000223!3.54e-07!59;CL:0000240!3.78e-07!6;CL:0000311!3.78e-07!6;CL:0000079!3.78e-07!6;CL:0000237!3.78e-07!6;CL:0000036!3.78e-07!6;CL:0000357!3.78e-07!6;CL:0000114!3.78e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002535;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.91e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!3.91e-13!4;DOID:1612!3.91e-13!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.67e-46;4!DOID:1612;8.67e-46;4!DOID:4362;1.11e-09;5!DOID:299;1.81e-07;25!DOID:3910;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.70e-46,4;DOID:1612,8.70e-46,4;DOID:4362,1.11e-09,5;DOID:305,3.56e-09,106;DOID:299,1.71e-07,25;DOID:7,3.25e-07,39;DOID:3910,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.14e-07!6;UBERON:0001560!1.14e-07!6;UBERON:0000161!1.47e-07!35;UBERON:0000162!5.52e-07!14;UBERON:0001353!5.52e-07!14;UBERON:0000163!5.52e-07!14;UBERON:0006866!5.52e-07!14;UBERON:0000164!5.52e-07!14;UBERON:0000931!5.52e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.53e-18;10!UBERON:0001443;7.00e-17;11!UBERON:0007029;1.32e-12;1!UBERON:0000002;3.25e-08;6!UBERON:0001560;3.25e-08;6!UBERON:0001255;9.27e-07;2!UBERON:0004903;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0001556;9.27e-07;2!UBERON:0002173;9.27e-07;2!UBERON:0002186;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.54e-18,10;UBERON:0001443,7.01e-17,11;UBERON:0007029,1.40e-12,1;UBERON:0000002,3.25e-08,6;UBERON:0001560,3.25e-08,6;UBERON:0000162,1.25e-07,14;UBERON:0001353,1.25e-07,14;UBERON:0000163,1.25e-07,14;UBERON:0006866,1.25e-07,14;UBERON:0000164,1.25e-07,14;UBERON:0000931,1.25e-07,14;UBERON:0004122,3.74e-07,15;UBERON:0004903,8.52e-07,2;UBERON:0002173,8.52e-07,2;UBERON:0002186,8.52e-07,2;UBERON:0001255,9.02e-07,2;UBERON:0001556,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,15.0138835612262,32.6224741596052,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.40101294060657,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0,1.25966373927138,0,0.492339221844278,0,0,0,0,1.479651084554,0,0,0,0,0,9.63582716015363,4.19807999981739,0,0.1137934482855,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,1.53366118706464,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0.320635281006135,0,0,1.58499458869517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687697182986169,2.49264202817511,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,2.78078504730173,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0.233939463462106,0,0,0,0,0.301925687133347,0.0771741581079447,0,1.41095188908457,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SPTSSB | |||
}} |
Latest revision as of 11:14, 16 September 2015
Short description: | p3@SPTSSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPTSSB_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 15bp_to_ENST00000497137_5end |
EntrezGene: | SPTSSB |
HGNC: | 24045 |
UniProt: | Q8NFR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 1.54e-18 | 10 |
chest | 7.01e-17 | 11 |
surface | 1.40e-12 | 1 |
uterine cervix | 3.25e-08 | 6 |
neck of organ | 3.25e-08 | 6 |
cloaca | 1.25e-07 | 14 |
anal region | 1.25e-07 | 14 |
embryonic cloaca | 1.25e-07 | 14 |
terminal part of digestive tract | 1.25e-07 | 14 |
primitive urogenital sinus | 1.25e-07 | 14 |
proctodeum | 1.25e-07 | 14 |
genitourinary system | 3.74e-07 | 15 |
bronchoalveolar duct junction | 8.52e-07 | 2 |
alveolar duct | 8.52e-07 | 2 |
bronchiole | 8.52e-07 | 2 |
urinary bladder | 9.02e-07 | 2 |
lower urinary tract | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.70e-46 | 4 |
breast cancer | 8.70e-46 | 4 |
cervical cancer | 1.11e-09 | 5 |
carcinoma | 3.56e-09 | 106 |
adenocarcinoma | 1.71e-07 | 25 |
disease of anatomical entity | 3.25e-07 | 39 |
lung adenocarcinoma | 8.52e-07 | 2 |