FFCP PHASE1:Mm9::chr14:9211241..9211265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18300|HGNC=|MCL_coexpression_id=1369|UniProt=P97805|association_with_transcript=11bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end|description=CAGE_peak_3_at_Oit1_5end|id=chr14:9211241..9211265,-|ontology_enrichment_celltype=CL:0002563!2.51e-08!9;CL:0002251!2.51e-08!9;CL:0002076!4.87e-07!15|ontology_enrichment_celltype_v019_2=CL:0002563,3.36e-13,9;CL:0002251,3.36e-13,9;CL:0002076,4.00e-12,15;CL:0000066,1.93e-10,25;CL:0000239,1.15e-09,6;CL:0000677,1.15e-09,6;CL:0000584,1.15e-09,6;CL:0000223,2.37e-08,20;CL:0000075,3.87e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!8.15e-15!128;UBERON:0001555!8.15e-15!128;UBERON:0007026!8.15e-15!128;UBERON:0004119!3.27e-14!130;UBERON:0000925!3.27e-14!130;UBERON:0006595!3.27e-14!130;UBERON:0004921!1.25e-13!126;UBERON:0004185!1.25e-13!126;UBERON:0005409!2.31e-13!59;UBERON:0000344!2.90e-13!15;UBERON:0001242!1.01e-11!13;UBERON:0000060!1.01e-11!13;UBERON:0001262!1.01e-11!13;UBERON:0004786!1.01e-11!13;UBERON:0000160!1.54e-10!43;UBERON:0003350!2.51e-08!9;UBERON:0004808!2.51e-08!9;UBERON:0001277!2.51e-08!9;UBERON:0004923!7.11e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.17e-33,47;UBERON:0000160,3.25e-31,31;UBERON:0000344,1.06e-21,15;UBERON:0001007,1.58e-19,116;UBERON:0001555,1.58e-19,116;UBERON:0007026,1.58e-19,116;UBERON:0001242,4.87e-19,13;UBERON:0001262,4.87e-19,13;UBERON:0004786,4.87e-19,13;UBERON:0004119,5.56e-19,118;UBERON:0000925,5.56e-19,118;UBERON:0006595,5.56e-19,118;UBERON:0004921,1.12e-17,114;UBERON:0003350,3.36e-13,9;UBERON:0004808,3.36e-13,9;UBERON:0001277,3.36e-13,9;UBERON:0004923,6.31e-12,24;UBERON:0000485,2.06e-10,11;UBERON:0007023,3.45e-08,51;UBERON:0000161,4.83e-08,5;UBERON:0002108,9.21e-07,4|phase1_expression=0,33.5016391333787,23.6599604482559,19.0552453123303,17.5313505481222,8.72972213941827,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,12.1594241322989,11.9292826154928,18.3754228516806,12.9228598847722,16.8067561494993,16.9120843316173,10.5852654499171,26.8293917892919,0,0,0,7.22129049378186,11.9688944658114,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,1.94841936910093,1.52015919285059,2.02209778005913,12.9027784082538,1.29468941823586,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,52.1896931410742,0,0,37.8076441708715,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,1.26265113531884,0,0,0,0,0.204109497453984,0,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0,0,0,0,220.389328250193,3.17340679996253,0,0,0,0.605050573870028,1.77902435075896,3.99473814836374,7.59246498471219,2.14108641141214,8.04272668160862,9.94782360205754,10.1381325301942,10.7858329038507,91.6425331468703,79.4573680284925,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,1.36593553500459,1.26108115284953,0,0.478364305972461,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3638033970382,0,0,0,0,0.820704498725306,6.99554007911642,0,0,0.412773735926445,0,0,0,0,0,0,0,84.9656850033451,0,0.406638934253697,3.02414954301044,6.27264888043406,6.98760203987768,9.30563990055263,9.75310777558964,54.4452359326782,78.4170588415347,34.1736622197809,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0.198681354781265,0,0.295379054349154,0.605798699688886,0.15241361331,0.504130925684203,0.487289403698762,0.192423683280659,0.233753804363138,4.53460767230423,0,0,0,6.56844619709447,8.63339387075437,13.1869169472431,14.7914181564555,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.758091635291392,1.01391719956096,0.188626341386076,0.561849044819294,0.832326981263301,0.804096565378586,0,0.463537303779422,0.578727661391115,0,0.147198920134397,0.685738504770831,0.354951612318675,0.953744759789284,0.290692833264657,0.0941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.154936841185966,1.15743966588685,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,1.10295709559758,0|short_description=p3@Oit1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18300 | |||
|HGNC= | |||
|MCL_coexpression_id=1369 | |||
|TSSclassifier=NA | |||
|UniProt=P97805 | |||
|association_with_transcript=11bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | |||
|cluster_id=chr14:9211241..9211265,- | |||
|description=CAGE_peak_3_at_Oit1_5end | |||
|id=chr14:9211241..9211265,- | |||
|ontology_enrichment_celltype=CL:0002563!2.51e-08!9;CL:0002251!2.51e-08!9;CL:0002076!4.87e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.36e-13,9;CL:0002251,3.36e-13,9;CL:0002076,4.00e-12,15;CL:0000066,1.93e-10,25;CL:0000239,1.15e-09,6;CL:0000677,1.15e-09,6;CL:0000584,1.15e-09,6;CL:0000223,2.37e-08,20;CL:0000075,3.87e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!8.15e-15!128;UBERON:0001555!8.15e-15!128;UBERON:0007026!8.15e-15!128;UBERON:0004119!3.27e-14!130;UBERON:0000925!3.27e-14!130;UBERON:0006595!3.27e-14!130;UBERON:0004921!1.25e-13!126;UBERON:0004185!1.25e-13!126;UBERON:0005409!2.31e-13!59;UBERON:0000344!2.90e-13!15;UBERON:0001242!1.01e-11!13;UBERON:0000060!1.01e-11!13;UBERON:0001262!1.01e-11!13;UBERON:0004786!1.01e-11!13;UBERON:0000160!1.54e-10!43;UBERON:0003350!2.51e-08!9;UBERON:0004808!2.51e-08!9;UBERON:0001277!2.51e-08!9;UBERON:0004923!7.11e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.17e-33,47;UBERON:0000160,3.25e-31,31;UBERON:0000344,1.06e-21,15;UBERON:0001007,1.58e-19,116;UBERON:0001555,1.58e-19,116;UBERON:0007026,1.58e-19,116;UBERON:0001242,4.87e-19,13;UBERON:0001262,4.87e-19,13;UBERON:0004786,4.87e-19,13;UBERON:0004119,5.56e-19,118;UBERON:0000925,5.56e-19,118;UBERON:0006595,5.56e-19,118;UBERON:0004921,1.12e-17,114;UBERON:0003350,3.36e-13,9;UBERON:0004808,3.36e-13,9;UBERON:0001277,3.36e-13,9;UBERON:0004923,6.31e-12,24;UBERON:0000485,2.06e-10,11;UBERON:0007023,3.45e-08,51;UBERON:0000161,4.83e-08,5;UBERON:0002108,9.21e-07,4 | |||
|phase1_expression=0,33.5016391333787,23.6599604482559,19.0552453123303,17.5313505481222,8.72972213941827,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,12.1594241322989,11.9292826154928,18.3754228516806,12.9228598847722,16.8067561494993,16.9120843316173,10.5852654499171,26.8293917892919,0,0,0,7.22129049378186,11.9688944658114,8.16677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,1.94841936910093,1.52015919285059,2.02209778005913,12.9027784082538,1.29468941823586,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,52.1896931410742,0,0,37.8076441708715,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,1.26265113531884,0,0,0,0,0.204109497453984,0,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0,0,0,0,220.389328250193,3.17340679996253,0,0,0,0.605050573870028,1.77902435075896,3.99473814836374,7.59246498471219,2.14108641141214,8.04272668160862,9.94782360205754,10.1381325301942,10.7858329038507,91.6425331468703,79.4573680284925,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,1.36593553500459,1.26108115284953,0,0.478364305972461,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3638033970382,0,0,0,0,0.820704498725306,6.99554007911642,0,0,0.412773735926445,0,0,0,0,0,0,0,84.9656850033451,0,0.406638934253697,3.02414954301044,6.27264888043406,6.98760203987768,9.30563990055263,9.75310777558964,54.4452359326782,78.4170588415347,34.1736622197809,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0.198681354781265,0,0.295379054349154,0.605798699688886,0.15241361331,0.504130925684203,0.487289403698762,0.192423683280659,0.233753804363138,4.53460767230423,0,0,0,6.56844619709447,8.63339387075437,13.1869169472431,14.7914181564555,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.758091635291392,1.01391719956096,0.188626341386076,0.561849044819294,0.832326981263301,0.804096565378586,0,0.463537303779422,0.578727661391115,0,0.147198920134397,0.685738504770831,0.354951612318675,0.953744759789284,0.290692833264657,0.0941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.154936841185966,1.15743966588685,0.249810577937946,0.935726433781634,0.859484216193193,0.57386499620653,1.10295709559758,0 | |||
|short_description=p3@Oit1 | |||
}} |
Latest revision as of 11:37, 26 September 2015
Short description: | p3@Oit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Oit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1369 |
Association with transcript: | 11bp_to_ENSMUST00000022269, NM_146050, uc007sfd.1_5end |
EntrezGene: | Oit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.36e-13 | 9 |
epithelial cell of alimentary canal | 3.36e-13 | 9 |
endo-epithelial cell | 4.00e-12 | 15 |
epithelial cell | 1.93e-10 | 25 |
brush border epithelial cell | 1.15e-09 | 6 |
gut absorptive cell | 1.15e-09 | 6 |
enterocyte | 1.15e-09 | 6 |
endodermal cell | 2.37e-08 | 20 |
columnar/cuboidal epithelial cell | 3.87e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.17e-33 | 47 |
intestine | 3.25e-31 | 31 |
mucosa | 1.06e-21 | 15 |
digestive system | 1.58e-19 | 116 |
digestive tract | 1.58e-19 | 116 |
primitive gut | 1.58e-19 | 116 |
intestinal mucosa | 4.87e-19 | 13 |
wall of intestine | 4.87e-19 | 13 |
gastrointestinal system mucosa | 4.87e-19 | 13 |
endoderm-derived structure | 5.56e-19 | 118 |
endoderm | 5.56e-19 | 118 |
presumptive endoderm | 5.56e-19 | 118 |
subdivision of digestive tract | 1.12e-17 | 114 |
epithelium of mucosa | 3.36e-13 | 9 |
gastrointestinal system epithelium | 3.36e-13 | 9 |
intestinal epithelium | 3.36e-13 | 9 |
organ component layer | 6.31e-12 | 24 |
simple columnar epithelium | 2.06e-10 | 11 |
adult organism | 3.45e-08 | 51 |
orifice | 4.83e-08 | 5 |
small intestine | 9.21e-07 | 4 |