FFCP PHASE1:Hg19::chrX:107683216..107683245,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:107683216..107683245,+
|short_description=p6@COL4A5
|description=CAGE_peak_6_at_COL4A5_5end
|association_with_transcript=0bp_to_ENST00000508186_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1287 | |EntrezGene=1287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2207 | |HGNC=2207 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQD0 | |UniProt=E7EQD0 | ||
|association_with_transcript=0bp_to_ENST00000508186_5end | |||
|cluster_id=chrX:107683216..107683245,+ | |||
|coexpression_cluster_id=C4843 | |||
|description=CAGE_peak_6_at_COL4A5_5end | |||
|id=chrX:107683216..107683245,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.44e-08!254;CL:0000220!5.84e-07!246;CL:0002321!6.71e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.07e-07;20!CL:0000244;3.23e-07;4!CL:0000731;3.23e-07;4!CL:0000349;4.41e-07;19!CL:0002623;6.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.51e-07,20;CL:0000244,1.93e-07,4;CL:0000731,1.93e-07,4;CL:0000349,4.05e-07,19;CL:0002623,6.43e-07,3;CL:0000622,8.84e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.81e-07;3!DOID:127;3.81e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.61e-07,3;DOID:127,3.61e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.77e-13!286;UBERON:0000481!5.05e-13!347;UBERON:0004119!3.71e-11!169;UBERON:0000925!3.71e-11!169;UBERON:0006595!3.71e-11!169;UBERON:0000922!6.67e-11!612;UBERON:0000468!6.88e-11!659;UBERON:0004111!9.99e-11!241;UBERON:0005156!5.89e-10!59;UBERON:0000990!5.89e-10!59;UBERON:0000483!1.72e-09!309;UBERON:0000480!1.90e-09!626;UBERON:0002050!1.93e-09!605;UBERON:0005423!1.93e-09!605;UBERON:0000467!2.47e-09!625;UBERON:0000119!3.33e-09!312;UBERON:0000923!4.27e-09!604;UBERON:0005291!4.27e-09!604;UBERON:0006598!4.27e-09!604;UBERON:0002532!4.27e-09!604;UBERON:0003133!1.74e-08!48;UBERON:0003104!1.86e-07!238;UBERON:0009142!1.86e-07!238;UBERON:0001007!2.91e-07!155;UBERON:0001555!2.91e-07!155;UBERON:0007026!2.91e-07!155;UBERON:0003100!3.34e-07!41;UBERON:0000064!5.71e-07!219;UBERON:0000475!6.51e-07!365;UBERON:0004175!8.78e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.66e-07;3!UBERON:0004054;3.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.51e-08,14;UBERON:0000158,2.51e-08,14;UBERON:0004119,7.26e-08,160;UBERON:0000925,7.26e-08,160;UBERON:0006595,7.26e-08,160;UBERON:0004175,1.29e-07,25;UBERON:0006947,3.75e-07,3;UBERON:0004054,3.75e-07,3;UBERON:0005156,4.68e-07,59;UBERON:0000990,4.68e-07,59;UBERON:0000922,7.98e-07,592 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0.982935746006035,0,5.02415155899396,5.27533956456907,0.37129905888014,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.940364164434263,0.572471974262113,0.547497700291537,1.38096903554283,0.382067028739756,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.472674085820339,0.443458794925128,0.351339142772504,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,3.70745706277013,1.72101972449288,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.67355336034844,0.490385709340376,1.36221684880438,2.88087962239999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.491337269247072,0.103325781175765,0,0,0,2.15585442544872,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.966304265816484,1.09098448236334,1.14721838155602,0,0.265059536642971,0.69716365721711,1.0366105501537,1.26160425437814,0,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.882351781859152,0.217879444092406,1.18635309555548,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.878002283269004,0,0,1.01847289674383,0.651616610620649,0,0,0,0.352226082707465,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,1.17587489739202,0.425325291727159,1.88072897675981,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0,4.00338382242813,0.542621605391443,0,0,2.48774364119782,0,4.22015127883421,4.35766729300147,5.99837947092342,0,0,0,1.4377491329495,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,1.77866236955724,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,1.03985430765404,1.24900292158013,1.10391690523754,0.702848489956279,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,1.5156378572313,4.99306318531491,1.20956117331872,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0.241718899183244,1.20303882181971,0.460404944679482,1.03333003348146,0,0.393373244878272,0,0.15403067420883,0,0,0.422206515571503,0,0.680374821106063,0.431831832204279,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,1.72279661398852,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,2.97512847649761,1.34533047155574,9.06050258711547,0.6069466851333,0,3.77774816196768,0,0.308033580176089,0.532306030317022,0,1.29726953372744,1.14499909393593,0.744316738719335,1.58189712359363,0.38126038784765,0.255897791311334,0,0,1.56989728039846,0.719489830333259,2.74537029736055,0.942499218765491,1.2130948894399,1.58510321173008,0.421258456238981,0,1.46228093778771,0,0.272999822815972,2.40389234321312,0,0,0,3.06915619677634,0.578775534266688,0.655894752046633,1.01455188481352,0.6196469961995,0.563391205064483,0.717056761020258,0.589494246078727,1.07001315444375,0,0,0,0.75894634753143,0,0.962221127255121,0,0,0.0941438007767792,1.72202149068492,1.68471475667626,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,5.25237866422918,0.296964680832639,4.91457123358771,0,0.140669416410513,0.779160935160341,0,0.211125408127993,1.39473591775749,0.552567831062295,0,0.511343412510774,0.246169610922139,0.622079175323615,0.629078458031288,0.179021174675609,0,1.479651084554,0,2.22273980289274,0,0,0,0.520855522170466,0.349839999984783,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0.544692317594951,0.975966209950223,2.07765697960252,0.91153644677601,0.23056390438806,0,0.108647371922008,2.23300811812344,0.457987967009312,0,0,0.470940769185074,0,0,0,0.167821586975843,0,0,0,0,0.565412285735763,0,0,0.176915129006678,0.611030144933625,0,0,0.208843899010911,0.202203398942031,0,0,0,0.19566461893209,0,2.36750641709634,3.62972148145992,0.30607276163049,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0.195984794828755,0.174118413160805,3.66926003308263,0,0.870806981601766,1.24251839046515,0.903270027585302,1.35784623083787,0,0.677942222341597,0.411125773940253,0,0.189932387867636,0.782205530939212,0.160317640503067,4.4825128895264,0.39961921916426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| ||
|short_description=p6@COL4A5 | |||
}} | }} |
Latest revision as of 23:38, 18 September 2015
Short description: | p6@COL4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL4A5_5end |
Coexpression cluster: | C4843_Small_amniotic_uterus_Amniotic_smooth_Mesenchymal_salivary |
Association with transcript: | 0bp_to_ENST00000508186_5end |
EntrezGene: | COL4A5 |
HGNC: | 2207 |
UniProt: | E7EQD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.51e-07 | 20 |
transitional epithelial cell | 1.93e-07 | 4 |
urothelial cell | 1.93e-07 | 4 |
extraembryonic cell | 4.05e-07 | 19 |
acinar cell of salivary gland | 6.43e-07 | 3 |
acinar cell | 8.84e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.51e-08 | 14 |
membranous layer | 2.51e-08 | 14 |
endoderm-derived structure | 7.26e-08 | 160 |
endoderm | 7.26e-08 | 160 |
presumptive endoderm | 7.26e-08 | 160 |
internal genitalia | 1.29e-07 | 25 |
male genital duct | 3.75e-07 | 3 |
internal male genitalia | 3.75e-07 | 3 |
reproductive structure | 4.68e-07 | 59 |
reproductive system | 4.68e-07 | 59 |
embryo | 7.98e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.61e-07 | 3 |
leiomyoma | 3.61e-07 | 3 |