FFCP PHASE1:Hg19::chr4:26322616..26322652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |||
|TSSclassifier=strong | |||
|UniProt=D6RIV8 | |||
|association_with_transcript=0bp_to_ENST00000511401,ENST00000513182,ENST00000515023_5end | |||
|cluster_id=chr4:26322616..26322652,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_RBPJ_5end | |||
|id=chr4:26322616..26322652,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.39e-32!76;CL:0000557!5.65e-29!71;CL:0002009!1.57e-28!65;CL:0002194!2.96e-27!63;CL:0000576!2.96e-27!63;CL:0000040!2.96e-27!63;CL:0000559!2.96e-27!63;CL:0000763!1.31e-26!112;CL:0000049!1.31e-26!112;CL:0002057!3.05e-26!42;CL:0000839!4.70e-25!70;CL:0000860!2.54e-23!45;CL:0000738!2.14e-22!140;CL:0000037!2.32e-19!172;CL:0000566!2.32e-19!172;CL:0002032!2.77e-18!165;CL:0000837!2.77e-18!165;CL:0000988!6.70e-17!182;CL:0002087!4.20e-16!119;CL:0002031!7.95e-16!124;CL:0000134!4.12e-09!358;CL:0002320!5.94e-09!365;CL:0000219!8.66e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-20;33!CL:0002057;5.38e-20;33!CL:0000576;1.42e-18;48!CL:0000473;1.15e-17;39!CL:0000234;1.15e-17;39!CL:0000766;1.47e-14;69!CL:0000763;3.61e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-34,72;CL:0000557,1.34e-31,67;CL:0002009,2.50e-31,61;CL:0002194,5.03e-30,59;CL:0000576,5.03e-30,59;CL:0000040,5.03e-30,59;CL:0000559,5.03e-30,59;CL:0000763,2.78e-28,108;CL:0000049,2.78e-28,108;CL:0000839,2.05e-27,66;CL:0000473,3.43e-27,48;CL:0000234,3.43e-27,48;CL:0000860,3.05e-26,42;CL:0002057,3.05e-26,42;CL:0000738,1.26e-23,136;CL:0000037,2.64e-20,168;CL:0002032,3.22e-19,161;CL:0000837,3.22e-19,161;CL:0000988,2.65e-18,177;CL:0002087,3.44e-17,115;CL:0002031,7.27e-17,120;CL:0000134,8.41e-10,354;CL:0002320,1.25e-09,361;CL:0000219,2.12e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-19;42!CL:0000049;1.77e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.64e-33!102;UBERON:0003061!3.64e-33!102;UBERON:0002193!1.62e-27!112;UBERON:0001474!8.58e-27!86;UBERON:0004765!9.89e-27!101;UBERON:0001434!9.89e-27!101;UBERON:0002371!1.87e-26!80;UBERON:0002405!3.94e-14!115;UBERON:0002204!1.71e-13!167;UBERON:0002384!5.17e-09!375;UBERON:0007023!7.02e-09!115;UBERON:0000178!9.18e-08!15;UBERON:0000179!9.18e-08!15;UBERON:0000463!9.18e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.07e-08;15!UBERON:0000179;9.07e-08;15!UBERON:0000463;9.07e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.57e-35,98;UBERON:0003061,2.57e-35,98;UBERON:0002193,3.09e-29,108;UBERON:0001474,6.91e-29,82;UBERON:0002371,1.18e-28,76;UBERON:0001434,3.61e-28,100;UBERON:0004765,2.51e-26,90;UBERON:0002405,1.21e-22,93;UBERON:0002204,1.65e-14,167;UBERON:0002384,1.09e-09,371;UBERON:0007023,8.95e-09,114;UBERON:0000178,9.18e-08,15;UBERON:0000179,9.18e-08,15;UBERON:0000463,9.18e-08,15 | |||
|phase1_expression=13.8075568245623,9.84862409898522,13.3906683891173,6.00439790118782,8.04529969969118,6.10636966870258,0,12.6343974685366,15.4099520637905,6.14334841253772,1.39560233594486,11.5773927228991,6.33040747748289,31.6841863577719,24.8548031795937,16.8081286612944,16.8754467846714,8.76372108464848,9.75865597581014,7.75662665883764,5.30401797235058,3.76145665773705,16.3154512664702,9.85495860524766,13.1819771574543,14.136480063371,11.4940825229924,11.8066171970519,29.5023207636678,47.2110159659572,77.7176939046702,2.75826367343678,1.50602959389125,4.06729411183466,6.97204805222715,15.4964463411289,15.5608232847469,115.785040383162,114.510879505451,79.4259786820018,55.7549530857412,63.159264873701,70.0605543964987,99.5977935640018,94.8468618658912,122.990119022223,97.6201955003875,88.4010959246925,107.468110700601,96.9523362125647,120.395532068677,149.456769289586,90.6681140337307,114.250788994337,74.484567626888,86.214991510513,90.3319356691469,140.002730809288,99.1711811281724,106.548436989263,115.720019769626,116.107657665724,135.036896209845,134.687021168331,82.7096330091464,79.4339314567596,82.8353591164115,104.770693412062,116.812173726125,152.683757827697,58.7237517554368,113.42951188417,108.230136504782,51.1237792874899,52.0880534914357,50.3180749220102,59.9834890322284,56.7668654940894,91.1314076572444,35.6265929676561,40.7779188258135,40.7341062895134,12.3197371122926,8.19207916893197,12.4531295540898,15.3622880123943,15.6154434944045,16.0930683187255,13.2208974556972,14.3108063180305,25.0453706408157,32.8852826047726,33.6400440750201,34.3645454305467,74.5476388765443,22.1242631211065,50.1609913790274,29.8688179689365,29.1954128579303,23.907668840867,14.9924242651452,21.7785990637977,15.5861382726329,31.6405697553893,38.2987679717288,34.1162197658777,35.7461100169821,22.9283462308959,20.4193175669009,13.8127839867088,11.8830507647915,19.7066098299836,28.6193066902777,32.639981026945,26.1338809512442,28.214026331694,26.0589935649306,21.9921565108883,39.9771113390814,15.2911398875566,9.76625180784628,9.50452044448374,25.8989204813769,27.5171213982,21.2382235138988,19.6525119196534,18.8859439291841,41.3293823610701,28.0812205572683,28.9648807765598,14.6284119788377,5.36560687762909,15.8549576685978,31.0837671050727,26.0695713530663,21.4372848062019,31.0161519349929,18.9787599418028,16.4490581865478,12.4168462579036,12.8238787111964,16.8963007392049,1.45718115317017,3.33705998505986,69.4531422421022,75.3981762505827,43.6102110501878,31.9577436569158,29.1717404497865,35.2884626263087,7.9504962946682,9.46258054616737,4.85996702250632,3.95715559346807,2.51699661725944,7.97842321626196,7.31482382878837,10.8535038851118,14.9421830328418,26.7776490211736,11.2792208790561,3.80136052859256,9.03029612928227,13.6035339727971,6.48113558305408,19.1101418527931,10.7774098860562,12.4998743336488,6.13266549863533,2.84779697870439,5.67925406184263,224.026709641308,193.890132074163,2.18047026071267,30.3152890534144,14.6891393530913,21.8475148341811,15.7760141411848,14.5414036701326,11.2135520028461,3.20246987189115,5.92002116201184,30.1874704337773,8.35206166832066,9.64425228369407,9.53551794163068,25.35174067712,7.73260725051529,24.9728061464256,10.8389646093445,15.8415601384909,25.483286205697,26.2234169876373,30.7587266677924,33.2771299145476,40.2896560782599,30.5844312280266,39.2040942903078,17.0614181202204,1.82032272387605,1.43723628363248,63.2943788467289,42.03982267698,44.3302584774693,28.9725229781353,17.1633165647451,14.5730917139399,12.8178366970824,19.1946910187082,23.4913127700424,30.5181937669769,12.6038260355449,31.0188113007701,13.1396675423271,14.1448810812008,24.9788971717074,23.4823182438489,21.2044370365056,29.3639176668935,80.3380902389495,17.0404604407975,17.2286087969265,13.0561656079075,7.92369497969517,10.6370987030426,10.3249654340041,34.2746114224163,25.8433048226896,25.562667431294,20.2139057279972,20.6903097718015,17.5189132356398,12.5159625863853,9.64861407289328,6.90674606762403,31.1126511781426,19.4907460050788,9.81946440330704,10.1150814046861,8.43538604592187,6.83822630940842,8.27941887551143,8.54174228799948,8.22470979777003,10.203516186518,9.23393176671337,2.21446636387394,0,6.9967581926338,4.41026134156626,10.1404027857465,12.7767538168091,16.5421173870793,11.9195036841956,13.4057398011994,25.2204681138833,6.91426798074341,3.37205259772859,7.33861498604905,12.59202854156,12.054907296482,3.11980435583874,20.2063878835383,18.6647952009874,21.1335649624479,9.67255199999195,8.33373922637899,14.0788072653603,4.74122638775565,3.43394464837949,71.89536577752,43.290789050759,28.6858143217246,5.62403003920662,13.9425166405053,10.4913571959366,9.49320340650192,9.00965209393282,1.53353071666084,33.0084369390282,15.6726212543542,26.3306706736781,38.7682674691626,25.5009715521287,16.3824567273796,10.6956759156318,2.34434894420094,3.4214489204541,15.7326063836085,7.80891950394185,18.0070652557264,11.3252395188814,5.66748089483264,29.2619760425591,25.7250714357978,7.15312891703765,6.7624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| |||
|short_description=p1@RBPJ | |||
}} |
Latest revision as of 11:16, 17 September 2015
Short description: | p1@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBPJ_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000511401, ENST00000513182, ENST00000515023_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.11e-34 | 72 |
granulocyte monocyte progenitor cell | 1.34e-31 | 67 |
macrophage dendritic cell progenitor | 2.50e-31 | 61 |
monopoietic cell | 5.03e-30 | 59 |
monocyte | 5.03e-30 | 59 |
monoblast | 5.03e-30 | 59 |
promonocyte | 5.03e-30 | 59 |
myeloid cell | 2.78e-28 | 108 |
common myeloid progenitor | 2.78e-28 | 108 |
myeloid lineage restricted progenitor cell | 2.05e-27 | 66 |
defensive cell | 3.43e-27 | 48 |
phagocyte | 3.43e-27 | 48 |
classical monocyte | 3.05e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-26 | 42 |
leukocyte | 1.26e-23 | 136 |
hematopoietic stem cell | 2.64e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.22e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.22e-19 | 161 |
hematopoietic cell | 2.65e-18 | 177 |
nongranular leukocyte | 3.44e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 7.27e-17 | 120 |
mesenchymal cell | 8.41e-10 | 354 |
connective tissue cell | 1.25e-09 | 361 |
motile cell | 2.12e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.57e-35 | 98 |
blood island | 2.57e-35 | 98 |
hemolymphoid system | 3.09e-29 | 108 |
bone element | 6.91e-29 | 82 |
bone marrow | 1.18e-28 | 76 |
skeletal system | 3.61e-28 | 100 |
skeletal element | 2.51e-26 | 90 |
immune system | 1.21e-22 | 93 |
musculoskeletal system | 1.65e-14 | 167 |
connective tissue | 1.09e-09 | 371 |
adult organism | 8.95e-09 | 114 |
blood | 9.18e-08 | 15 |
haemolymphatic fluid | 9.18e-08 | 15 |
organism substance | 9.18e-08 | 15 |