FFCP PHASE1:Hg19::chr5:146833485..146833519,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |||
|TSSclassifier=strong | |||
|UniProt=Q14195 | |||
|association_with_transcript=2bp_to_ENST00000398514_5end | |||
|cluster_id=chr5:146833485..146833519,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_DPYSL3_5end | |||
|id=chr5:146833485..146833519,- | |||
|ontology_enrichment_celltype=CL:0000055!1.95e-09!180;CL:0000133!8.11e-09!59;CL:0002319!2.00e-08!25;CL:0000047!5.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.25e-08;6!CL:0000404;3.25e-08;6!CL:0002319;7.65e-08;25!CL:0002322;3.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.39e-10,8;CL:0000133,1.73e-08,59;CL:0000540,3.27e-08,6;CL:0000031,3.27e-08,6;CL:0000404,3.27e-08,6;CL:0002319,3.81e-08,25;CL:0002322,3.98e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;3.25e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.44e-24!82;UBERON:0005743!5.45e-24!86;UBERON:0000073!2.65e-22!94;UBERON:0001016!2.65e-22!94;UBERON:0004121!7.93e-21!169;UBERON:0003075!2.29e-20!86;UBERON:0007284!2.29e-20!86;UBERON:0000924!3.01e-20!173;UBERON:0006601!3.01e-20!173;UBERON:0002346!2.56e-19!90;UBERON:0000477!7.14e-18!286;UBERON:0000468!4.67e-17!659;UBERON:0000955!7.54e-17!69;UBERON:0006238!7.54e-17!69;UBERON:0001049!2.16e-16!57;UBERON:0005068!2.16e-16!57;UBERON:0006241!2.16e-16!57;UBERON:0007135!2.16e-16!57;UBERON:0004111!2.80e-16!241;UBERON:0000033!4.62e-16!123;UBERON:0007023!7.94e-16!115;UBERON:0000025!1.35e-15!194;UBERON:0000153!1.70e-15!129;UBERON:0007811!1.70e-15!129;UBERON:0002616!8.89e-15!59;UBERON:0000922!7.03e-14!612;UBERON:0000483!4.62e-13!309;UBERON:0000480!4.71e-13!626;UBERON:0000467!6.92e-13!625;UBERON:0003056!9.87e-13!61;UBERON:0000119!2.11e-12!312;UBERON:0002020!8.63e-12!34;UBERON:0003528!8.63e-12!34;UBERON:0000481!1.06e-11!347;UBERON:0003080!2.00e-11!42;UBERON:0001893!2.14e-11!34;UBERON:0002780!2.63e-11!41;UBERON:0001890!2.63e-11!41;UBERON:0006240!2.63e-11!41;UBERON:0002791!2.95e-11!33;UBERON:0002050!3.49e-11!605;UBERON:0005423!3.49e-11!605;UBERON:0000923!7.89e-11!604;UBERON:0005291!7.89e-11!604;UBERON:0006598!7.89e-11!604;UBERON:0002532!7.89e-11!604;UBERON:0000475!8.33e-11!365;UBERON:0001869!1.22e-10!32;UBERON:0000956!3.00e-10!25;UBERON:0000203!3.00e-10!25;UBERON:0002619!9.70e-09!22;UBERON:0000064!2.79e-08!219;UBERON:0001950!5.51e-08!20;UBERON:0004872!6.80e-08!84;UBERON:0000062!1.73e-07!511;UBERON:0002049!2.02e-07!79;UBERON:0007798!2.02e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;4.87e-10;32!UBERON:0003528;9.12e-10;34!UBERON:0002020;9.12e-10;34!UBERON:0001869;5.23e-09;32!UBERON:0000956;6.21e-09;25!UBERON:0000203;6.21e-09;25!UBERON:0001893;7.27e-09;34!UBERON:0000073;1.77e-08;53!UBERON:0002616;1.77e-08;53!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41!UBERON:0000922;3.27e-07;49!UBERON:0002619;4.90e-07;22!UBERON:0001950;9.73e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.96e-21,81;UBERON:0001016,7.75e-19,89;UBERON:0003075,3.43e-17,82;UBERON:0007284,3.43e-17,82;UBERON:0002346,2.00e-16,86;UBERON:0004121,2.09e-15,171;UBERON:0000924,2.09e-15,171;UBERON:0006601,2.09e-15,171;UBERON:0010314,1.20e-14,132;UBERON:0001049,1.51e-14,56;UBERON:0005068,1.51e-14,56;UBERON:0006241,1.51e-14,56;UBERON:0007135,1.51e-14,56;UBERON:0003528,1.90e-12,34;UBERON:0002020,1.90e-12,34;UBERON:0000955,1.99e-12,68;UBERON:0006238,1.99e-12,68;UBERON:0010371,2.27e-12,104;UBERON:0000073,3.23e-12,53;UBERON:0002616,3.23e-12,53;UBERON:0003056,9.64e-12,61;UBERON:0001893,3.77e-11,34;UBERON:0002791,4.26e-11,32;UBERON:0002780,6.52e-11,41;UBERON:0001890,6.52e-11,41;UBERON:0003080,6.52e-11,41;UBERON:0006240,6.52e-11,41;UBERON:0000025,2.48e-10,192;UBERON:0001869,4.31e-10,32;UBERON:0000922,8.65e-10,592;UBERON:0007023,1.06e-09,114;UBERON:0002050,2.62e-09,564;UBERON:0000956,2.99e-09,25;UBERON:0000203,2.99e-09,25;UBERON:0000923,3.32e-09,560;UBERON:0010316,3.32e-09,560;UBERON:0005291,3.32e-09,560;UBERON:0006598,3.32e-09,560;UBERON:0010317,3.32e-09,560;UBERON:0002532,3.32e-09,560;UBERON:0011216,7.93e-09,223;UBERON:0004111,9.06e-09,240;UBERON:0005423,8.00e-08,581;UBERON:0002619,3.05e-07,22;UBERON:0001950,5.98e-07,20 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,3.12872766099101,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,0.791300934685361,1.48519623552056,1.98838425436749,2.6893005858071,0,1.46062018077475,1.46379839637152,0.984968464614303,0.612002073732759,3.76145665773705,2.86235987131057,1.64249310087461,3.26410862946487,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,1.44575660953827,1.50401373190767,0.434539556882471,2.3858578411533,1.45990461090791,3.97046232089085,3.54767035940102,3.77689578480442,1.44076983047484,0,0,0,0,0,0,0,0,1.19257444420023,1.72046919021225,0.694281003215189,1.69592382577203,2.09749718104953,0,1.46296476575767,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0,0,0,0.267899184852239,0,0.112611480483322,0,1.89853131913626,1.46561395144326,0,0,0,3.47880366186723,1.8994576749687,0.794455084879313,1.14734648299525,0.709336764396714,1.68203280042692,2.1349799145941,3.45334567784024,0.311211035399766,1.34710672069688,0.490385709340376,0,1.72852777344,0,0,0,0,0,0,0,0.204154171254893,0.737005903870608,1.34323515528495,1.18800285728205,2.22540236350701,0,0,0,0.250237039743928,0.277064115484183,1.31693286264251,0.30648779579902,0.751190294532984,0.907457465280168,0.538168907066586,0.85422955527427,0.211931901159562,0,0.618315175430633,1.03056216018252,0.558350568994769,0.506328996723799,0.292311015483596,0.504867548488229,0.552299391853796,1.45481451136931,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,0,0,7.80631719229411,8.48190517257506,6.27447291495399,4.5610864206763,6.56034212276634,5.83963774521328,0,0.643240938192885,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0.491953754172454,1.02940686179115,0,0,0,0,0.325808305310325,0,1.44331342025273,3.70977295920246,3.75707821554629,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,0,2.12750493267896,1.04007436911366,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,1.59956785891291,0,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,2.54094624222463,2.60279707715243,8.50617694055465,11.7261385734044,15.9484687913291,0,0,0,1.47229790062968,1.50051156317903,0.813795071099207,2.28767947683888,1.24900292158013,0.788512075169673,1.99140405487612,1.80567659836631,2.27407504055985,3.10419213877515,0,0.553107505625109,0.434418072340414,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.384417447767103,0,1.28683136914886,0,0,0.710246901252508,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0.728364672026868,1.31124414959424,0,0.231046011313244,0.784349769176855,0,0.527758144464379,0,0.170093705276516,1.94324324491925,0,2.16757150035082,2.00675909541941,0,0,0.223874754722178,0,0,0,0.984043937099117,0.325378394664303,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.712256285173899,0,0,0.127612712494584,0.4046311234222,0.464845549297286,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,2.59453906745488,1.14499909393593,0.372158369359667,1.2655176988749,0.953150969619124,0,2.56763392820352,0,0,0.359744915166629,0.823611089208164,0.471249609382746,1.01091240786658,0,0.421258456238981,0,0.731140468893853,0,0.818999468447914,1.27264888758341,5.65040583101214,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,1.9676842561399,4.05820753925408,0.92947049429925,0.563391205064483,0.573645408816206,1.27723753317057,4.63672366925625,0.354761064070598,2.74439925886963,0.658589785919804,0.75894634753143,1.39973888097993,0,0.670302275535787,0,0.564862804660675,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.852408440419239,1.43246690842614,1.48482340416319,0.614321404198464,1.9882952955326,4.3607519087259,0.222617410045812,0,0,10.1616474008046,0.828851746593443,0,0.511343412510774,0,0.311039587661807,0,0,0,4.04437963111428,0,0,0.969332746095218,1.02044907978036,41.9188975802508,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,3.25610384288601,0,0.884634079449797,0.591095237907095,0.438770794307945,0,0,3.38581137416707,0.455768223388005,0,0,0,0.957003479195758,0.824378340616761,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0.706765357169704,1.73110911793673,0.995261931078505,1.41532103205343,0,0,0,0,1.88723172345896,1.60515529459758,0.234264445725339,0,0,0,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| |||
|short_description=p7@DPYSL3 | |||
}} |
Latest revision as of 22:10, 15 September 2015
Short description: | p7@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DPYSL3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 2bp_to_ENST00000398514_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | Q14195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.39e-10 | 8 |
neurectodermal cell | 1.73e-08 | 59 |
neuron | 3.27e-08 | 6 |
neuroblast | 3.27e-08 | 6 |
electrically signaling cell | 3.27e-08 | 6 |
neural cell | 3.81e-08 | 25 |
embryonic stem cell | 3.98e-07 | 5 |