FFCP PHASE1:Hg19::chrX:153594978..153595014,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:153594978..153595014,-
|short_description=p@chrX:153594978..153595014,-
|description=CAGE_peak_at_chrX:153594978..153595014,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:153594978..153595014,- | |||
|coexpression_cluster_id=C965 | |||
|description=CAGE_peak_at_chrX:153594978..153595014,- | |||
|id=chrX:153594978..153595014,- | |||
|ontology_enrichment_celltype=CL:0000144!6.27e-12!625;CL:0002371!1.25e-11!591;CL:0002057!1.49e-11!42;CL:0000860!8.69e-11!45;CL:0000548!3.90e-10!679;CL:0000004!3.90e-10!679;CL:0000255!3.90e-10!679;CL:0000012!2.40e-09!682;CL:0002194!4.98e-09!63;CL:0000576!4.98e-09!63;CL:0000040!4.98e-09!63;CL:0000559!4.98e-09!63;CL:0000048!7.56e-09!430;CL:0002009!9.10e-09!65;CL:0000723!1.58e-08!436;CL:0000055!2.30e-08!180;CL:0000034!1.20e-07!444;CL:0000003!4.49e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.59e-13;33!CL:0002057;5.59e-13;33!CL:0000473;8.21e-11;39!CL:0000234;8.21e-11;39!CL:0000576;6.54e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.38e-14,48;CL:0000234,1.38e-14,48;CL:0000860,2.70e-14,42;CL:0002057,2.70e-14,42;CL:0002194,3.29e-11,59;CL:0000576,3.29e-11,59;CL:0000040,3.29e-11,59;CL:0000559,3.29e-11,59;CL:0002009,2.26e-10,61;CL:0000839,1.49e-08,66;CL:0000048,2.56e-08,427;CL:0000557,3.14e-08,67;CL:0000723,8.14e-08,433;CL:0000034,6.64e-07,441;CL:0000766,8.67e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.02e-10!216;UBERON:0002204!1.03e-08!167;UBERON:0000926!8.94e-08!448;UBERON:0004120!8.94e-08!448;UBERON:0006603!8.94e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.66e-11,315;UBERON:0004120,2.66e-11,315;UBERON:0006603,2.66e-11,315;UBERON:0003081,4.40e-09,203;UBERON:0002204,8.15e-08,167 | |||
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|short_description=p@chrX:153594978..153595014,- | |||
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Latest revision as of 06:59, 1 August 2015
Short description: | p@chrX:153594978..153595014, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:153594978..153595014, - |
Coexpression cluster: | C965_smooth_Osteoblast_Adipocyte_aorta_penis_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.38e-14 | 48 |
phagocyte | 1.38e-14 | 48 |
classical monocyte | 2.70e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-14 | 42 |
monopoietic cell | 3.29e-11 | 59 |
monocyte | 3.29e-11 | 59 |
monoblast | 3.29e-11 | 59 |
promonocyte | 3.29e-11 | 59 |
macrophage dendritic cell progenitor | 2.26e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-08 | 66 |
multi fate stem cell | 2.56e-08 | 427 |
granulocyte monocyte progenitor cell | 3.14e-08 | 67 |
somatic stem cell | 8.14e-08 | 433 |
stem cell | 6.64e-07 | 441 |
myeloid leukocyte | 8.67e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.66e-11 | 315 |
mesoderm-derived structure | 2.66e-11 | 315 |
presumptive mesoderm | 2.66e-11 | 315 |
lateral plate mesoderm | 4.40e-09 | 203 |
musculoskeletal system | 8.15e-08 | 167 |