FFCP PHASE1:Mm9::chr18:46372223..46372244,-: Difference between revisions
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{{FFCP|EntrezGene=28105|HGNC=|MCL_coexpression_id=3045|UniProt=Q80WG7|association_with_transcript=16bp_to_ENSMUST00000037011,NM_178872,uc008evi.2_5end|description=CAGE_peak_4_at_Trim36_5end|id=chr18:46372223..46372244,-|ontology_enrichment_celltype=CL:0000117!6.26e-14!23;CL:0000337!6.26e-14!23;CL:0000540!5.55e-11!33;CL:0000047!5.55e-11!33;CL:0000031!5.55e-11!33;CL:0000404!5.55e-11!33;CL:0000221!1.87e-10!44;CL:0000133!1.87e-10!44;CL:0002319!1.12e-09!43;CL:0000393!4.22e-08!39;CL:0000211!4.22e-08!39;CL:0000055!3.80e-07!50;CL:0002609!3.84e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,8.69e-23,23;CL:0000337,8.69e-23,23;CL:0000540,7.39e-20,33;CL:0000047,7.39e-20,33;CL:0000031,7.39e-20,33;CL:0000404,7.39e-20,33;CL:0002609,6.87e-17,6;CL:0000393,2.98e-16,39;CL:0000211,2.98e-16,39;CL:0000221,3.91e-16,44;CL:0000133,3.91e-16,44;CL:0002319,2.08e-14,43;CL:0002613,2.94e-10,3;CL:0000120,5.44e-10,3;CL:0002608,1.93e-09,3;CL:0002321,9.65e-09,70;CL:0000197,1.57e-07,2;CL:0002491,1.57e-07,2;CL:0000098,1.57e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.88e-11!102;UBERON:0000924!2.88e-11!102;UBERON:0006601!2.88e-11!102;UBERON:0000020!1.07e-10!12;UBERON:0001032!1.07e-10!12;UBERON:0004456!1.07e-10!12;UBERON:0003056!6.83e-10!49;UBERON:0000033!1.18e-09!63;UBERON:0002346!1.31e-09!71;UBERON:0003075!1.31e-09!71;UBERON:0007284!1.31e-09!71;UBERON:0000970!2.82e-08!9;UBERON:0000019!2.82e-08!9;UBERON:0000047!2.82e-08!9;UBERON:0004088!2.82e-08!9;UBERON:0002104!2.82e-08!9;UBERON:0001456!2.82e-08!9;UBERON:0003072!2.82e-08!9;UBERON:0003071!2.82e-08!9;UBERON:0004128!2.82e-08!9;UBERON:0005085!3.14e-08!13;UBERON:0001444!1.58e-07!11;UBERON:0000073!1.84e-07!75;UBERON:0001016!1.84e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.41e-13,95;UBERON:0000924,6.41e-13,95;UBERON:0006601,6.41e-13,95;UBERON:0010371,8.09e-12,73;UBERON:0003056,1.01e-11,49;UBERON:0000020,4.03e-11,12;UBERON:0001032,4.03e-11,12;UBERON:0004456,4.03e-11,12;UBERON:0002346,8.14e-11,64;UBERON:0003075,8.14e-11,64;UBERON:0007284,8.14e-11,64;UBERON:0000033,3.45e-10,13;UBERON:0005085,3.45e-10,13;UBERON:0002020,4.57e-10,34;UBERON:0001017,2.84e-09,73;UBERON:0001016,6.39e-09,75;UBERON:0010314,1.76e-08,92;UBERON:0003528,2.48e-08,29;UBERON:0002791,2.48e-08,29;UBERON:0001893,2.48e-08,29;UBERON:0000970,1.38e-07,9;UBERON:0000019,1.38e-07,9;UBERON:0000047,1.38e-07,9;UBERON:0010312,1.38e-07,9;UBERON:0004088,1.38e-07,9;UBERON:0002104,1.38e-07,9;UBERON:0001456,1.38e-07,9;UBERON:0003072,1.38e-07,9;UBERON:0004128,1.38e-07,9;UBERON:0003071,1.38e-07,9;UBERON:0004766,1.57e-07,2;UBERON:0008193,1.57e-07,2;UBERON:0005913,1.57e-07,2;UBERON:0011158,1.57e-07,2;UBERON:0005744,1.57e-07,2;UBERON:0003457,1.57e-07,2;UBERON:0008001,1.57e-07,2;UBERON:0007497,1.57e-07,2;UBERON:0009955,1.57e-07,2;UBERON:0003067,1.57e-07,2;UBERON:0002546,1.57e-07,2;UBERON:0007914,1.57e-07,2;UBERON:0005253,1.57e-07,2;UBERON:0002227,1.57e-07,2;UBERON:0001846,1.57e-07,2;UBERON:0004339,1.57e-07,2;UBERON:0002105,1.57e-07,2;UBERON:0001678,1.57e-07,2;UBERON:0003128,1.57e-07,2;UBERON:0001694,1.57e-07,2;UBERON:0004681,1.57e-07,2;UBERON:0001839,1.57e-07,2;UBERON:0001690,1.57e-07,2;UBERON:0001844,1.57e-07,2;UBERON:0001849,1.57e-07,2;UBERON:0002499,1.57e-07,2;UBERON:0001855,1.57e-07,2;UBERON:0011137,1.57e-07,2;UBERON:0001703,1.57e-07,2;UBERON:0010323,1.57e-07,2;UBERON:0003129,1.57e-07,2;UBERON:0003069,1.57e-07,2;UBERON:0003051,1.57e-07,2;UBERON:0004637,1.57e-07,2;UBERON:0004761,1.57e-07,2;UBERON:0010113,1.57e-07,2;UBERON:0009123,1.57e-07,2;UBERON:0010351,1.57e-07,2;UBERON:0009617,1.57e-07,2;UBERON:0005641,1.57e-07,2;UBERON:0010349,1.57e-07,2;UBERON:0002780,5.24e-07,39;UBERON:0001890,5.24e-07,39;UBERON:0006240,5.24e-07,39;UBERON:0001049,6.96e-07,52;UBERON:0005068,6.96e-07,52;UBERON:0006241,6.96e-07,52;UBERON:0007135,6.96e-07,52;UBERON:0003080,8.85e-07,40|phase1_expression=16.8156289460034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,4.43681982454325,0,0,0,0,0,0,0,1.34796496001021,2.02508907497536,2.94454945891935,0,0.220868540951614,1.95985278743926,2.58782771749238,3.67687514644008,0,0.127687338085188,0.153606533256243,6.06676923558892,6.49562269577109,6.25096044668112,0.837548997004143,0,0.15279824777681,0.883885756421003,1.85083185038834,3.72798891650601,0.302904773332736,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0,0,0,9.85903938436764,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.904335843315735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.780722657776222,2.06911893990126,2.16074555766419,1.35634336052144,1.63287597963187,1.40925092313335,0.749613796477831,0.776110112217047,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0.696710015581316,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=28105 | |||
|HGNC= | |||
|MCL_coexpression_id=3045 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WG7 | |||
|association_with_transcript=16bp_to_ENSMUST00000037011,NM_178872,uc008evi.2_5end | |||
|cluster_id=chr18:46372223..46372244,- | |||
|description=CAGE_peak_4_at_Trim36_5end | |||
|id=chr18:46372223..46372244,- | |||
|ontology_enrichment_celltype=CL:0000117!6.26e-14!23;CL:0000337!6.26e-14!23;CL:0000540!5.55e-11!33;CL:0000047!5.55e-11!33;CL:0000031!5.55e-11!33;CL:0000404!5.55e-11!33;CL:0000221!1.87e-10!44;CL:0000133!1.87e-10!44;CL:0002319!1.12e-09!43;CL:0000393!4.22e-08!39;CL:0000211!4.22e-08!39;CL:0000055!3.80e-07!50;CL:0002609!3.84e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.69e-23,23;CL:0000337,8.69e-23,23;CL:0000540,7.39e-20,33;CL:0000047,7.39e-20,33;CL:0000031,7.39e-20,33;CL:0000404,7.39e-20,33;CL:0002609,6.87e-17,6;CL:0000393,2.98e-16,39;CL:0000211,2.98e-16,39;CL:0000221,3.91e-16,44;CL:0000133,3.91e-16,44;CL:0002319,2.08e-14,43;CL:0002613,2.94e-10,3;CL:0000120,5.44e-10,3;CL:0002608,1.93e-09,3;CL:0002321,9.65e-09,70;CL:0000197,1.57e-07,2;CL:0002491,1.57e-07,2;CL:0000098,1.57e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.88e-11!102;UBERON:0000924!2.88e-11!102;UBERON:0006601!2.88e-11!102;UBERON:0000020!1.07e-10!12;UBERON:0001032!1.07e-10!12;UBERON:0004456!1.07e-10!12;UBERON:0003056!6.83e-10!49;UBERON:0000033!1.18e-09!63;UBERON:0002346!1.31e-09!71;UBERON:0003075!1.31e-09!71;UBERON:0007284!1.31e-09!71;UBERON:0000970!2.82e-08!9;UBERON:0000019!2.82e-08!9;UBERON:0000047!2.82e-08!9;UBERON:0004088!2.82e-08!9;UBERON:0002104!2.82e-08!9;UBERON:0001456!2.82e-08!9;UBERON:0003072!2.82e-08!9;UBERON:0003071!2.82e-08!9;UBERON:0004128!2.82e-08!9;UBERON:0005085!3.14e-08!13;UBERON:0001444!1.58e-07!11;UBERON:0000073!1.84e-07!75;UBERON:0001016!1.84e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.41e-13,95;UBERON:0000924,6.41e-13,95;UBERON:0006601,6.41e-13,95;UBERON:0010371,8.09e-12,73;UBERON:0003056,1.01e-11,49;UBERON:0000020,4.03e-11,12;UBERON:0001032,4.03e-11,12;UBERON:0004456,4.03e-11,12;UBERON:0002346,8.14e-11,64;UBERON:0003075,8.14e-11,64;UBERON:0007284,8.14e-11,64;UBERON:0000033,3.45e-10,13;UBERON:0005085,3.45e-10,13;UBERON:0002020,4.57e-10,34;UBERON:0001017,2.84e-09,73;UBERON:0001016,6.39e-09,75;UBERON:0010314,1.76e-08,92;UBERON:0003528,2.48e-08,29;UBERON:0002791,2.48e-08,29;UBERON:0001893,2.48e-08,29;UBERON:0000970,1.38e-07,9;UBERON:0000019,1.38e-07,9;UBERON:0000047,1.38e-07,9;UBERON:0010312,1.38e-07,9;UBERON:0004088,1.38e-07,9;UBERON:0002104,1.38e-07,9;UBERON:0001456,1.38e-07,9;UBERON:0003072,1.38e-07,9;UBERON:0004128,1.38e-07,9;UBERON:0003071,1.38e-07,9;UBERON:0004766,1.57e-07,2;UBERON:0008193,1.57e-07,2;UBERON:0005913,1.57e-07,2;UBERON:0011158,1.57e-07,2;UBERON:0005744,1.57e-07,2;UBERON:0003457,1.57e-07,2;UBERON:0008001,1.57e-07,2;UBERON:0007497,1.57e-07,2;UBERON:0009955,1.57e-07,2;UBERON:0003067,1.57e-07,2;UBERON:0002546,1.57e-07,2;UBERON:0007914,1.57e-07,2;UBERON:0005253,1.57e-07,2;UBERON:0002227,1.57e-07,2;UBERON:0001846,1.57e-07,2;UBERON:0004339,1.57e-07,2;UBERON:0002105,1.57e-07,2;UBERON:0001678,1.57e-07,2;UBERON:0003128,1.57e-07,2;UBERON:0001694,1.57e-07,2;UBERON:0004681,1.57e-07,2;UBERON:0001839,1.57e-07,2;UBERON:0001690,1.57e-07,2;UBERON:0001844,1.57e-07,2;UBERON:0001849,1.57e-07,2;UBERON:0002499,1.57e-07,2;UBERON:0001855,1.57e-07,2;UBERON:0011137,1.57e-07,2;UBERON:0001703,1.57e-07,2;UBERON:0010323,1.57e-07,2;UBERON:0003129,1.57e-07,2;UBERON:0003069,1.57e-07,2;UBERON:0003051,1.57e-07,2;UBERON:0004637,1.57e-07,2;UBERON:0004761,1.57e-07,2;UBERON:0010113,1.57e-07,2;UBERON:0009123,1.57e-07,2;UBERON:0010351,1.57e-07,2;UBERON:0009617,1.57e-07,2;UBERON:0005641,1.57e-07,2;UBERON:0010349,1.57e-07,2;UBERON:0002780,5.24e-07,39;UBERON:0001890,5.24e-07,39;UBERON:0006240,5.24e-07,39;UBERON:0001049,6.96e-07,52;UBERON:0005068,6.96e-07,52;UBERON:0006241,6.96e-07,52;UBERON:0007135,6.96e-07,52;UBERON:0003080,8.85e-07,40 | |||
|phase1_expression=16.8156289460034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,4.43681982454325,0,0,0,0,0,0,0,1.34796496001021,2.02508907497536,2.94454945891935,0,0.220868540951614,1.95985278743926,2.58782771749238,3.67687514644008,0,0.127687338085188,0.153606533256243,6.06676923558892,6.49562269577109,6.25096044668112,0.837548997004143,0,0.15279824777681,0.883885756421003,1.85083185038834,3.72798891650601,0.302904773332736,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0,0,0,9.85903938436764,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.904335843315735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.780722657776222,2.06911893990126,2.16074555766419,1.35634336052144,1.63287597963187,1.40925092313335,0.749613796477831,0.776110112217047,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0.696710015581316,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,1.18586333383957,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0.177340233642274,0.713475270408282,2.13913726782757,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0,0,0,0,0,0,2.25477175473676,0,0,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,1.35232715822533,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,1.19707462020309,1.36586884603307,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0,0,0.758091635291392,0,0.188626341386076,0.655490552289177,0.384150914429216,0.631790158511746,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.883193520806384,1.02860775715625,0.354951612318675,0.476872379894642,0.726732083161643,0.470546902076653,0.676916863133412,0.73171189149109,0.526139422875686,0.271608227691724,0.561142271657738,0.593175090620871,0.591026894253381,0,1.23949472948773,1.15743966588685,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.661774257358546,0.695603506861264 | |||
|short_description=p4@Trim36 | |||
}} |
Latest revision as of 07:41, 27 September 2015
Short description: | p4@Trim36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trim36_5end |
Coexpression cluster: | MCL_coexpression_mm9:3045 |
Association with transcript: | 16bp_to_ENSMUST00000037011, NM_178872, uc008evi.2_5end |
EntrezGene: | Trim36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.69e-23 | 23 |
neuroblast (sensu Vertebrata) | 8.69e-23 | 23 |
neuron | 7.39e-20 | 33 |
neuronal stem cell | 7.39e-20 | 33 |
neuroblast | 7.39e-20 | 33 |
electrically signaling cell | 7.39e-20 | 33 |
neuron of cerebral cortex | 6.87e-17 | 6 |
electrically responsive cell | 2.98e-16 | 39 |
electrically active cell | 2.98e-16 | 39 |
ectodermal cell | 3.91e-16 | 44 |
neurectodermal cell | 3.91e-16 | 44 |
neural cell | 2.08e-14 | 43 |
striatum neuron | 2.94e-10 | 3 |
granule cell | 5.44e-10 | 3 |
hippocampal neuron | 1.93e-09 | 3 |
embryonic cell | 9.65e-09 | 70 |
receptor cell | 1.57e-07 | 2 |
auditory epithelial cell | 1.57e-07 | 2 |
sensory epithelial cell | 1.57e-07 | 2 |