FFCP PHASE1:Mm9::chr18:75857287..75857292,-: Difference between revisions
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{{FFCP|EntrezGene=269037|HGNC=|UniProt=E9Q1U6,Q6PEE2|association_with_transcript=57bp_to_ENSMUST00000165559,NM_201354,uc008fqg.1_5end|description=CAGE_peak_6_at_Ctif_5end|id=chr18:75857287..75857292,-|ontology_enrichment_celltype=CL:0000393!4.20e-07!39;CL:0000211!4.20e-07!39;CL:0000117!7.59e-07!23;CL:0000337!7.59e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,6.49e-25,3;CL:0000117,8.20e-17,23;CL:0000337,8.20e-17,23;CL:0002612,1.07e-11,3;CL:0000540,1.28e-11,33;CL:0000047,1.28e-11,33;CL:0000031,1.28e-11,33;CL:0000404,1.28e-11,33;CL:0000393,8.97e-10,39;CL:0000211,8.97e-10,39;CL:0002319,7.95e-09,43;CL:0000221,1.29e-08,44;CL:0000133,1.29e-08,44;CL:0002321,7.72e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.40e-08!73;UBERON:0005743!1.40e-08!73;UBERON:0000073!1.83e-08!75;UBERON:0001016!1.83e-08!75;UBERON:0004121!1.43e-07!102;UBERON:0000924!1.43e-07!102;UBERON:0006601!1.43e-07!102;UBERON:0001049!5.05e-07!52;UBERON:0005068!5.05e-07!52;UBERON:0006241!5.05e-07!52;UBERON:0007135!5.05e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.49e-25,3;UBERON:0002275,6.49e-25,3;UBERON:0001948,4.81e-15,5;UBERON:0002315,4.81e-15,5;UBERON:0002240,1.20e-12,6;UBERON:0005174,1.20e-12,6;UBERON:0001137,1.20e-12,6;UBERON:0002257,1.07e-11,3;UBERON:0003076,6.57e-11,12;UBERON:0003057,6.57e-11,12;UBERON:0000073,5.46e-09,54|phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.810035629990144,0,1.14260393761521,0.662605622854841,0.122490799214954,0,0,1.10115880999389,3.31987079021488,1.53606533256243,0,0.457438218012048,0.52091337055676,0.837548997004143,0,1.22238598221448,1.76777151284201,0.284743361598206,1.1183966749518,0.151452386666368,0,0.579728977403356,0,0,0,0.649776417447669,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0.628340120440365,0,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.340182495756639,0.384341160854549,0.281105173679186,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0.491764273019036,0,0.321101179975584,1.05490517932983,0.327869890753351,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0,0.241251699712623,0.477489376012546,0.164140899745061,0,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0,0.704143431874524,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0,0,0,0.661774257358546,0|short_description=p6@Ctif}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269037 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q1U6,Q6PEE2 | |||
|association_with_transcript=57bp_to_ENSMUST00000165559,NM_201354,uc008fqg.1_5end | |||
|cluster_id=chr18:75857287..75857292,- | |||
|description=CAGE_peak_6_at_Ctif_5end | |||
|id=chr18:75857287..75857292,- | |||
|ontology_enrichment_celltype=CL:0000393!4.20e-07!39;CL:0000211!4.20e-07!39;CL:0000117!7.59e-07!23;CL:0000337!7.59e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.49e-25,3;CL:0000117,8.20e-17,23;CL:0000337,8.20e-17,23;CL:0002612,1.07e-11,3;CL:0000540,1.28e-11,33;CL:0000047,1.28e-11,33;CL:0000031,1.28e-11,33;CL:0000404,1.28e-11,33;CL:0000393,8.97e-10,39;CL:0000211,8.97e-10,39;CL:0002319,7.95e-09,43;CL:0000221,1.29e-08,44;CL:0000133,1.29e-08,44;CL:0002321,7.72e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-08!73;UBERON:0005743!1.40e-08!73;UBERON:0000073!1.83e-08!75;UBERON:0001016!1.83e-08!75;UBERON:0004121!1.43e-07!102;UBERON:0000924!1.43e-07!102;UBERON:0006601!1.43e-07!102;UBERON:0001049!5.05e-07!52;UBERON:0005068!5.05e-07!52;UBERON:0006241!5.05e-07!52;UBERON:0007135!5.05e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.49e-25,3;UBERON:0002275,6.49e-25,3;UBERON:0001948,4.81e-15,5;UBERON:0002315,4.81e-15,5;UBERON:0002240,1.20e-12,6;UBERON:0005174,1.20e-12,6;UBERON:0001137,1.20e-12,6;UBERON:0002257,1.07e-11,3;UBERON:0003076,6.57e-11,12;UBERON:0003057,6.57e-11,12;UBERON:0000073,5.46e-09,54 | |||
|phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.810035629990144,0,1.14260393761521,0.662605622854841,0.122490799214954,0,0,1.10115880999389,3.31987079021488,1.53606533256243,0,0.457438218012048,0.52091337055676,0.837548997004143,0,1.22238598221448,1.76777151284201,0.284743361598206,1.1183966749518,0.151452386666368,0,0.579728977403356,0,0,0,0.649776417447669,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0.628340120440365,0,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.340182495756639,0.384341160854549,0.281105173679186,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0.491764273019036,0,0.321101179975584,1.05490517932983,0.327869890753351,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0,0.241251699712623,0.477489376012546,0.164140899745061,0,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0,0.704143431874524,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0,0,0,0.661774257358546,0 | |||
|short_description=p6@Ctif | |||
}} |
Latest revision as of 17:43, 1 October 2015
Short description: | p6@Ctif |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ctif_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENSMUST00000165559, NM_201354, uc008fqg.1_5end |
EntrezGene: | Ctif |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.49e-25 | 3 |
CNS neuron (sensu Vertebrata) | 8.20e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.20e-17 | 23 |
neuron of the ventral spinal cord | 1.07e-11 | 3 |
neuron | 1.28e-11 | 33 |
neuronal stem cell | 1.28e-11 | 33 |
neuroblast | 1.28e-11 | 33 |
electrically signaling cell | 1.28e-11 | 33 |
electrically responsive cell | 8.97e-10 | 39 |
electrically active cell | 8.97e-10 | 39 |
neural cell | 7.95e-09 | 43 |
ectodermal cell | 1.29e-08 | 44 |
neurectodermal cell | 1.29e-08 | 44 |
embryonic cell | 7.72e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.49e-25 | 3 |
reticular formation | 6.49e-25 | 3 |
regional part of spinal cord | 4.81e-15 | 5 |
gray matter of spinal cord | 4.81e-15 | 5 |
spinal cord | 1.20e-12 | 6 |
dorsal region element | 1.20e-12 | 6 |
dorsum | 1.20e-12 | 6 |
ventral horn of spinal cord | 1.07e-11 | 3 |
posterior neural tube | 6.57e-11 | 12 |
chordal neural plate | 6.57e-11 | 12 |
regional part of nervous system | 5.46e-09 | 54 |