FFCP PHASE1:Hg19::chrX:43832711..43832727,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:43832711..43832727,-
|short_description=p4@NDP
|description=CAGE_peak_4_at_NDP_5end
|association_with_transcript=22bp_to_ENST00000378062_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4693 | |EntrezGene=4693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7678 | |HGNC=7678 | ||
|TSSclassifier=strong | |||
|UniProt=Q00604 | |UniProt=Q00604 | ||
|association_with_transcript=22bp_to_ENST00000378062_5end | |||
|cluster_id=chrX:43832711..43832727,- | |||
|description=CAGE_peak_4_at_NDP_5end | |||
|id=chrX:43832711..43832727,- | |||
|ontology_enrichment_celltype=CL:0002620!2.73e-08!23;CL:0000055!1.18e-07!180;CL:0000153!2.37e-07!9;CL:0000447!2.37e-07!9;CL:0000667!7.98e-07!6;CL:0000058!7.98e-07!6;CL:0000138!7.98e-07!6;CL:0002551!8.59e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;6.03e-09;6!CL:0000153;9.99e-09;9!CL:0000447;9.99e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,8.11e-09,6;CL:0000138,8.11e-09,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.47e-11;3!UBERON:0006601;1.74e-07;82!UBERON:0007297;7.06e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.49e-32!57;UBERON:0005068!8.49e-32!57;UBERON:0006241!8.49e-32!57;UBERON:0007135!8.49e-32!57;UBERON:0002616!1.08e-29!59;UBERON:0001017!1.96e-27!82;UBERON:0003075!2.26e-27!86;UBERON:0007284!2.26e-27!86;UBERON:0005743!2.24e-26!86;UBERON:0002346!2.51e-26!90;UBERON:0000955!2.65e-26!69;UBERON:0006238!2.65e-26!69;UBERON:0002780!5.87e-25!41;UBERON:0001890!5.87e-25!41;UBERON:0006240!5.87e-25!41;UBERON:0001893!2.57e-24!34;UBERON:0003080!4.68e-24!42;UBERON:0007023!5.10e-24!115;UBERON:0000073!6.00e-24!94;UBERON:0001016!6.00e-24!94;UBERON:0002020!8.11e-24!34;UBERON:0003528!8.11e-24!34;UBERON:0002791!2.02e-23!33;UBERON:0001869!2.61e-22!32;UBERON:0003056!3.83e-20!61;UBERON:0000033!1.80e-19!123;UBERON:0000153!5.66e-19!129;UBERON:0007811!5.66e-19!129;UBERON:0000956!5.39e-18!25;UBERON:0000203!5.39e-18!25;UBERON:0002619!1.12e-15!22;UBERON:0004121!3.82e-15!169;UBERON:0000924!6.90e-15!173;UBERON:0006601!6.90e-15!173;UBERON:0001950!5.92e-14!20;UBERON:0000475!1.72e-12!365;UBERON:0000477!4.11e-10!286;UBERON:0000468!8.60e-10!659;UBERON:0000467!2.05e-09!625;UBERON:0000480!2.53e-09!626;UBERON:0000481!3.19e-09!347;UBERON:0000025!4.59e-09!194;UBERON:0000483!5.37e-09!309;UBERON:0000119!5.70e-09!312;UBERON:0003076!8.11e-09!15;UBERON:0003057!8.11e-09!15;UBERON:0004733!3.85e-08!12;UBERON:0002028!3.85e-08!12;UBERON:0007277!3.85e-08!12;UBERON:0000062!6.10e-08!511;UBERON:0002420!9.97e-08!9;UBERON:0007245!9.97e-08!9;UBERON:0010009!9.97e-08!9;UBERON:0010011!9.97e-08!9;UBERON:0000454!9.97e-08!9;UBERON:0004111!1.40e-07!241;UBERON:0004732!2.76e-07!13;UBERON:0002308!2.91e-07!9;UBERON:0000125!2.91e-07!9;UBERON:0000922!3.49e-07!612;UBERON:0002050!5.45e-07!605;UBERON:0005423!5.45e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.08e-25;34!UBERON:0000073;6.72e-25;53!UBERON:0002616;6.72e-25;53!UBERON:0001869;4.01e-21;32!UBERON:0002791;4.91e-21;32!UBERON:0002780;7.99e-21;41!UBERON:0001890;7.99e-21;41!UBERON:0003528;1.57e-20;34!UBERON:0002020;1.57e-20;34!UBERON:0000955;2.44e-19;68!UBERON:0000956;7.86e-17;25!UBERON:0000203;7.86e-17;25!UBERON:0002619;1.71e-16;22!UBERON:0001950;2.30e-15;20!UBERON:0001017;1.30e-14;75!UBERON:0002420;1.32e-11;9!UBERON:0007245;1.32e-11;9!UBERON:0010009;1.32e-11;9!UBERON:0010011;1.32e-11;9!UBERON:0000454;1.32e-11;9!UBERON:0001016;3.17e-11;83!UBERON:0009663;2.06e-10;7!UBERON:0004733;5.38e-09;12!UBERON:0002028;5.38e-09;12!UBERON:0004732;3.02e-08;13!UBERON:0000200;4.39e-08;6!UBERON:0000125;4.99e-08;9!UBERON:0002308;4.99e-08;9!UBERON:0007023;6.76e-08;114!UBERON:0000369;3.18e-07;4!UBERON:0002435;3.18e-07;4!UBERON:0000204;3.18e-07;4!UBERON:0001871;3.48e-07;6!UBERON:0002771;7.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.67e-40,56;UBERON:0005068,5.67e-40,56;UBERON:0006241,5.67e-40,56;UBERON:0007135,5.67e-40,56;UBERON:0000073,1.23e-39,53;UBERON:0002616,1.23e-39,53;UBERON:0000955,1.53e-33,68;UBERON:0006238,1.53e-33,68;UBERON:0001017,4.31e-33,81;UBERON:0002780,1.08e-31,41;UBERON:0001890,1.08e-31,41;UBERON:0003080,1.08e-31,41;UBERON:0006240,1.08e-31,41;UBERON:0001893,3.26e-29,34;UBERON:0001016,5.65e-29,89;UBERON:0003075,7.94e-29,82;UBERON:0007284,7.94e-29,82;UBERON:0002346,4.12e-27,86;UBERON:0002791,5.51e-25,32;UBERON:0001869,7.30e-25,32;UBERON:0003056,1.84e-23,61;UBERON:0003528,2.73e-23,34;UBERON:0002020,2.73e-23,34;UBERON:0010371,1.17e-22,104;UBERON:0007023,2.47e-22,114;UBERON:0010314,3.92e-20,132;UBERON:0000956,6.50e-17,25;UBERON:0000203,6.50e-17,25;UBERON:0002619,1.79e-16,22;UBERON:0001950,2.76e-15,20;UBERON:0004121,3.37e-15,171;UBERON:0000924,3.37e-15,171;UBERON:0006601,3.37e-15,171;UBERON:0002420,2.14e-11,9;UBERON:0007245,2.14e-11,9;UBERON:0010009,2.14e-11,9;UBERON:0010011,2.14e-11,9;UBERON:0000454,2.14e-11,9;UBERON:0009663,3.52e-10,7;UBERON:0011216,1.25e-09,223;UBERON:0000025,1.95e-09,192;UBERON:0003076,2.20e-09,15;UBERON:0003057,2.20e-09,15;UBERON:0004733,4.99e-09,12;UBERON:0002028,4.99e-09,12;UBERON:0007277,4.99e-09,12;UBERON:0004732,2.82e-08,13;UBERON:0000200,3.87e-08,6;UBERON:0000125,7.50e-08,9;UBERON:0002308,7.50e-08,9;UBERON:0001871,1.87e-07,6;UBERON:0002771,2.83e-07,2;UBERON:0000369,5.72e-07,4;UBERON:0002435,5.72e-07,4;UBERON:0000204,5.72e-07,4;UBERON:0010082,5.72e-07,4 | |||
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| ||
|short_description=p4@NDP | |||
}} | }} |
Latest revision as of 03:01, 25 September 2015
Short description: | p4@NDP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDP_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000378062_5end |
EntrezGene: | NDP |
HGNC: | 7678 |
UniProt: | Q00604 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.11e-09 | 6 |
chondrocyte | 8.11e-09 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |