FFCP PHASE1:Mm9::chr19:19011103..19011115,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=53|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:19011103..19011115,-|id=chr19:19011103..19011115,-|ontology_enrichment_celltype=CL:0000117!1.39e-09!23;CL:0000337!1.39e-09!23|ontology_enrichment_celltype_v019_2=CL:0002610,2.59e-07,3;CL:0002612,3.90e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.17e-35!63;UBERON:0003056!2.64e-35!49;UBERON:0002346!1.20e-31!71;UBERON:0003075!1.20e-31!71;UBERON:0007284!1.20e-31!71;UBERON:0000955!3.86e-28!50;UBERON:0006238!3.86e-28!50;UBERON:0001049!1.18e-27!52;UBERON:0005068!1.18e-27!52;UBERON:0006241!1.18e-27!52;UBERON:0007135!1.18e-27!52;UBERON:0002616!2.35e-27!49;UBERON:0003080!1.20e-25!40;UBERON:0002780!1.07e-24!39;UBERON:0001890!1.07e-24!39;UBERON:0006240!1.07e-24!39;UBERON:0004121!8.77e-24!102;UBERON:0000924!8.77e-24!102;UBERON:0006601!8.77e-24!102;UBERON:0000073!1.41e-21!75;UBERON:0001016!1.41e-21!75;UBERON:0007811!2.54e-21!86;UBERON:0001017!1.04e-20!73;UBERON:0005743!1.04e-20!73;UBERON:0002020!2.90e-19!34;UBERON:0000153!8.55e-18!94;UBERON:0002791!2.15e-17!29;UBERON:0003528!2.15e-17!29;UBERON:0001893!2.15e-17!29;UBERON:0000956!3.66e-14!21;UBERON:0001869!3.66e-14!21;UBERON:0000203!3.66e-14!21;UBERON:0002619!2.93e-11!17;UBERON:0000970!2.42e-10!9;UBERON:0000019!2.42e-10!9;UBERON:0000047!2.42e-10!9;UBERON:0004088!2.42e-10!9;UBERON:0002104!2.42e-10!9;UBERON:0001456!2.42e-10!9;UBERON:0003072!2.42e-10!9;UBERON:0003071!2.42e-10!9;UBERON:0004128!2.42e-10!9;UBERON:0002021!2.94e-10!10;UBERON:0000411!2.94e-10!10;UBERON:0001950!2.94e-10!10;UBERON:0000020!2.42e-08!12;UBERON:0001032!2.42e-08!12;UBERON:0004456!2.42e-08!12;UBERON:0001894!3.46e-08!10;UBERON:0006222!3.46e-08!10;UBERON:0001444!7.49e-08!11;UBERON:0005085!2.00e-07!13;UBERON:0004111!4.54e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.95e-36,64;UBERON:0003075,1.95e-36,64;UBERON:0007284,1.95e-36,64;UBERON:0003056,1.48e-35,49;UBERON:0010371,4.67e-31,73;UBERON:0004121,2.80e-27,95;UBERON:0000924,2.80e-27,95;UBERON:0006601,2.80e-27,95;UBERON:0000073,5.63e-25,54;UBERON:0010314,3.80e-23,92;UBERON:0000970,1.68e-22,9;UBERON:0000019,1.68e-22,9;UBERON:0000047,1.68e-22,9;UBERON:0010312,1.68e-22,9;UBERON:0004088,1.68e-22,9;UBERON:0002104,1.68e-22,9;UBERON:0001456,1.68e-22,9;UBERON:0003072,1.68e-22,9;UBERON:0004128,1.68e-22,9;UBERON:0003071,1.68e-22,9;UBERON:0001049,7.01e-22,52;UBERON:0005068,7.01e-22,52;UBERON:0006241,7.01e-22,52;UBERON:0007135,7.01e-22,52;UBERON:0003080,1.19e-18,40;UBERON:0002021,1.39e-18,10;UBERON:0000411,1.39e-18,10;UBERON:0001950,1.39e-18,10;UBERON:0001017,2.27e-18,73;UBERON:0001444,4.60e-18,11;UBERON:0001016,1.03e-17,75;UBERON:0002616,2.56e-17,46;UBERON:0002780,4.15e-17,39;UBERON:0001890,4.15e-17,39;UBERON:0006240,4.15e-17,39;UBERON:0000955,7.61e-17,47;UBERON:0006238,7.61e-17,47;UBERON:0000020,2.12e-16,12;UBERON:0001032,2.12e-16,12;UBERON:0004456,2.12e-16,12;UBERON:0002020,6.94e-16,34;UBERON:0000033,5.42e-15,13;UBERON:0005085,5.42e-15,13;UBERON:0003528,7.81e-13,29;UBERON:0002791,7.81e-13,29;UBERON:0001893,7.81e-13,29;UBERON:0002619,3.35e-10,17;UBERON:0000956,7.11e-10,21;UBERON:0001869,7.11e-10,21;UBERON:0000203,7.11e-10,21;UBERON:0000483,9.19e-09,174;UBERON:0000119,1.40e-08,176;UBERON:0004684,2.59e-07,3;UBERON:0002275,2.59e-07,3;UBERON:0002257,3.90e-07,3;UBERON:0000025,6.63e-07,114;UBERON:0004111,7.40e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.841299845405528,0,0.220868540951614,0.367472397644862,0.191690942036473,0.919218786610021,1.10115880999389,2.29837208553338,2.30409799884365,0.131886287730194,0.548925861614458,0,0.279182999001381,1.12552522006336,1.22238598221448,1.76777151284201,1.99320353118744,1.1183966749518,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.69623150928681,1.37250180845588,1.00523481690292,3.12883776346098,2.81287003063364,1.87009240103604,1.78465389374533,0,0,0,1.47309299120532,7.67710613479952,2.98872735763515,7.38254732201932,12.5084998803643,16.192686798016,26.3914263786791,13.3993466120412,14.4873887613849,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,1.98067203434441,0.517434735131018,0.428674070063185,0.532020700926821,0.713475270408282,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:19011103..19011115,- | |||
|description=CAGE_peak_at_chr19:19011103..19011115,- | |||
|id=chr19:19011103..19011115,- | |||
|ontology_enrichment_celltype=CL:0000117!1.39e-09!23;CL:0000337!1.39e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.59e-07,3;CL:0002612,3.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.17e-35!63;UBERON:0003056!2.64e-35!49;UBERON:0002346!1.20e-31!71;UBERON:0003075!1.20e-31!71;UBERON:0007284!1.20e-31!71;UBERON:0000955!3.86e-28!50;UBERON:0006238!3.86e-28!50;UBERON:0001049!1.18e-27!52;UBERON:0005068!1.18e-27!52;UBERON:0006241!1.18e-27!52;UBERON:0007135!1.18e-27!52;UBERON:0002616!2.35e-27!49;UBERON:0003080!1.20e-25!40;UBERON:0002780!1.07e-24!39;UBERON:0001890!1.07e-24!39;UBERON:0006240!1.07e-24!39;UBERON:0004121!8.77e-24!102;UBERON:0000924!8.77e-24!102;UBERON:0006601!8.77e-24!102;UBERON:0000073!1.41e-21!75;UBERON:0001016!1.41e-21!75;UBERON:0007811!2.54e-21!86;UBERON:0001017!1.04e-20!73;UBERON:0005743!1.04e-20!73;UBERON:0002020!2.90e-19!34;UBERON:0000153!8.55e-18!94;UBERON:0002791!2.15e-17!29;UBERON:0003528!2.15e-17!29;UBERON:0001893!2.15e-17!29;UBERON:0000956!3.66e-14!21;UBERON:0001869!3.66e-14!21;UBERON:0000203!3.66e-14!21;UBERON:0002619!2.93e-11!17;UBERON:0000970!2.42e-10!9;UBERON:0000019!2.42e-10!9;UBERON:0000047!2.42e-10!9;UBERON:0004088!2.42e-10!9;UBERON:0002104!2.42e-10!9;UBERON:0001456!2.42e-10!9;UBERON:0003072!2.42e-10!9;UBERON:0003071!2.42e-10!9;UBERON:0004128!2.42e-10!9;UBERON:0002021!2.94e-10!10;UBERON:0000411!2.94e-10!10;UBERON:0001950!2.94e-10!10;UBERON:0000020!2.42e-08!12;UBERON:0001032!2.42e-08!12;UBERON:0004456!2.42e-08!12;UBERON:0001894!3.46e-08!10;UBERON:0006222!3.46e-08!10;UBERON:0001444!7.49e-08!11;UBERON:0005085!2.00e-07!13;UBERON:0004111!4.54e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.95e-36,64;UBERON:0003075,1.95e-36,64;UBERON:0007284,1.95e-36,64;UBERON:0003056,1.48e-35,49;UBERON:0010371,4.67e-31,73;UBERON:0004121,2.80e-27,95;UBERON:0000924,2.80e-27,95;UBERON:0006601,2.80e-27,95;UBERON:0000073,5.63e-25,54;UBERON:0010314,3.80e-23,92;UBERON:0000970,1.68e-22,9;UBERON:0000019,1.68e-22,9;UBERON:0000047,1.68e-22,9;UBERON:0010312,1.68e-22,9;UBERON:0004088,1.68e-22,9;UBERON:0002104,1.68e-22,9;UBERON:0001456,1.68e-22,9;UBERON:0003072,1.68e-22,9;UBERON:0004128,1.68e-22,9;UBERON:0003071,1.68e-22,9;UBERON:0001049,7.01e-22,52;UBERON:0005068,7.01e-22,52;UBERON:0006241,7.01e-22,52;UBERON:0007135,7.01e-22,52;UBERON:0003080,1.19e-18,40;UBERON:0002021,1.39e-18,10;UBERON:0000411,1.39e-18,10;UBERON:0001950,1.39e-18,10;UBERON:0001017,2.27e-18,73;UBERON:0001444,4.60e-18,11;UBERON:0001016,1.03e-17,75;UBERON:0002616,2.56e-17,46;UBERON:0002780,4.15e-17,39;UBERON:0001890,4.15e-17,39;UBERON:0006240,4.15e-17,39;UBERON:0000955,7.61e-17,47;UBERON:0006238,7.61e-17,47;UBERON:0000020,2.12e-16,12;UBERON:0001032,2.12e-16,12;UBERON:0004456,2.12e-16,12;UBERON:0002020,6.94e-16,34;UBERON:0000033,5.42e-15,13;UBERON:0005085,5.42e-15,13;UBERON:0003528,7.81e-13,29;UBERON:0002791,7.81e-13,29;UBERON:0001893,7.81e-13,29;UBERON:0002619,3.35e-10,17;UBERON:0000956,7.11e-10,21;UBERON:0001869,7.11e-10,21;UBERON:0000203,7.11e-10,21;UBERON:0000483,9.19e-09,174;UBERON:0000119,1.40e-08,176;UBERON:0004684,2.59e-07,3;UBERON:0002275,2.59e-07,3;UBERON:0002257,3.90e-07,3;UBERON:0000025,6.63e-07,114;UBERON:0004111,7.40e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.841299845405528,0,0.220868540951614,0.367472397644862,0.191690942036473,0.919218786610021,1.10115880999389,2.29837208553338,2.30409799884365,0.131886287730194,0.548925861614458,0,0.279182999001381,1.12552522006336,1.22238598221448,1.76777151284201,1.99320353118744,1.1183966749518,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.69623150928681,1.37250180845588,1.00523481690292,3.12883776346098,2.81287003063364,1.87009240103604,1.78465389374533,0,0,0,1.47309299120532,7.67710613479952,2.98872735763515,7.38254732201932,12.5084998803643,16.192686798016,26.3914263786791,13.3993466120412,14.4873887613849,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,1.98067203434441,0.517434735131018,0.428674070063185,0.532020700926821,0.713475270408282,1.15184314421485,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.73260649706906,0.214368379079066,2.00628841614145,4.51801474093653,1.38097570952153,6.87474616127276,4.1244763762485,1.37016503954128,0.755393897389701,3.37511250115903,4.05289082901798,2.71885445390523,4.65984280576638,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0,0.666740183404846,0,0.64183841918363,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0,0.887379030796687,0.476872379894642,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr19:19011103..19011115,- | |||
}} |
Latest revision as of 09:11, 6 August 2015
Short description: | p@chr19:19011103..19011115, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:19011103..19011115, - |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.59e-07 | 3 |
neuron of the ventral spinal cord | 3.90e-07 | 3 |