FFCP PHASE1:Mm9::chr19:31157472..31157536,+: Difference between revisions
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{{FFCP|EntrezGene=83410|HGNC=|MCL_coexpression_id=60|UniProt=Q8C7E9|association_with_transcript=141bp_to_ENSMUST00000066039,NM_031249,uc008her.1_5end|description=CAGE_peak_1_at_Cstf2t_5end|id=chr19:31157472..31157536,+|ontology_enrichment_celltype=CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000540!4.19e-09!33;CL:0000047!4.19e-09!33;CL:0000031!4.19e-09!33;CL:0000404!4.19e-09!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.13e-11,23;CL:0000337,5.13e-11,23;CL:0000540,4.19e-09,33;CL:0000047,4.19e-09,33;CL:0000031,4.19e-09,33;CL:0000404,4.19e-09,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.95e-23!63;UBERON:0001049!1.69e-22!52;UBERON:0005068!1.69e-22!52;UBERON:0006241!1.69e-22!52;UBERON:0007135!1.69e-22!52;UBERON:0003056!4.53e-22!49;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000153!2.50e-21!94;UBERON:0001017!7.83e-21!73;UBERON:0005743!7.83e-21!73;UBERON:0002616!1.21e-20!49;UBERON:0002346!1.53e-20!71;UBERON:0003075!1.53e-20!71;UBERON:0007284!1.53e-20!71;UBERON:0007811!5.04e-20!86;UBERON:0000073!1.73e-19!75;UBERON:0001016!1.73e-19!75;UBERON:0003080!6.57e-19!40;UBERON:0002780!2.50e-18!39;UBERON:0001890!2.50e-18!39;UBERON:0006240!2.50e-18!39;UBERON:0002020!3.95e-16!34;UBERON:0004121!1.74e-14!102;UBERON:0000924!1.74e-14!102;UBERON:0006601!1.74e-14!102;UBERON:0002791!3.65e-14!29;UBERON:0003528!3.65e-14!29;UBERON:0001893!3.65e-14!29;UBERON:0000025!8.55e-13!114;UBERON:0004111!7.94e-11!122;UBERON:0000956!4.83e-10!21;UBERON:0001869!4.83e-10!21;UBERON:0000203!4.83e-10!21;UBERON:0000477!2.30e-08!154;UBERON:0002619!2.47e-08!17;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000483!4.48e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.67e-25,64;UBERON:0003075,2.67e-25,64;UBERON:0007284,2.67e-25,64;UBERON:0000073,7.95e-23,54;UBERON:0010314,1.19e-22,92;UBERON:0001049,1.69e-22,52;UBERON:0005068,1.69e-22,52;UBERON:0006241,1.69e-22,52;UBERON:0007135,1.69e-22,52;UBERON:0003056,4.53e-22,49;UBERON:0001017,7.83e-21,73;UBERON:0010371,1.39e-20,73;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002616,7.83e-20,46;UBERON:0001016,1.73e-19,75;UBERON:0003080,6.57e-19,40;UBERON:0002780,2.50e-18,39;UBERON:0001890,2.50e-18,39;UBERON:0006240,2.50e-18,39;UBERON:0004121,2.57e-17,95;UBERON:0000924,2.57e-17,95;UBERON:0006601,2.57e-17,95;UBERON:0002020,3.95e-16,34;UBERON:0003528,3.65e-14,29;UBERON:0002791,3.65e-14,29;UBERON:0001893,3.65e-14,29;UBERON:0000025,8.55e-13,114;UBERON:0004111,7.94e-11,122;UBERON:0000956,4.83e-10,21;UBERON:0001869,4.83e-10,21;UBERON:0000203,4.83e-10,21;UBERON:0000483,2.27e-08,174;UBERON:0002619,2.47e-08,17;UBERON:0000119,6.77e-08,176;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10|phase1_expression=45.1619748835519,16.0528687514106,11.8299802241279,19.0552453123303,15.0268718983904,14.6054966563344,17.7545606852599,36.0254072401998,21.3998857670533,17.7889040004715,38.1816069142876,42.678105062505,44.1697883222511,44.1473032215937,16.9885978525988,17.2103977281352,7.69518065940961,42.5873923233621,39.90030017927,31.8292238848523,37.759220827075,25.5177744586275,29.2543763835608,20.6390225403495,15.8292403936347,13.2073351746455,16.3689558540448,19.6078821744159,31.5438876297581,25.9591033652729,18.4036323843903,19.0509202037889,22.1423323530445,15.8481681015439,15.8868390863201,17.9533416987172,13.0668388007916,32.2269355667419,32.8160844699996,39.2642807980349,23.5292595212406,30.7370468231301,37.86980753643,72.1388767000058,68.4294285731723,45.7031412882587,28.1660883965294,30.0874715805016,27.2410866590745,31.3032137509596,30.2370670710783,12.9377307928474,34.7309994539514,25.3876749703971,21.1739093459752,30.8711323243136,21.7765414353455,24.2365883370398,64.3366345533521,84.1095657042532,60.213983333087,24.0579617769084,25.789549087223,22.497492932035,16.8107281636386,13.4991221839759,17.0772062995491,26.5110630671873,50.1857723573032,53.1923397026861,54.4741649900079,46.56111045782,49.2536846322098,58.3056204263181,59.5200375023248,46.8801581171111,36.3382407297983,54.0117440100344,52.379827840379,66.3388027282875,74.1964789615542,73.4487852485032,54.4406848052693,48.9603470727562,57.7577376596342,50.0868595305235,54.1012387036591,64.1214093639034,24.4595604466185,25.3164726357731,33.0445517119913,24.0918685554788,11.5595126730318,23.746940432064,24.0417274455638,22.8493712419641,28.7911061270091,45.3344658057634,56.1137769942197,38.5140136216271,45.4924245878678,66.7297682554453,43.3168907501298,0,18.6182295269644,17.7351905832569,18.1988800205322,27.5183150122935,31.8493596886021,24.1960686675664,33.6561533926304,27.7063585264048,26.7513976817028,22.0055055206829,21.9890882343768,27.7723166838583,22.9891319992968,22.7020990364261,26.5383165584962,32.6769036893767,25.3967746229453,29.5773904412485,29.8226817948995,61.1911865754134,65.9757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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83410 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C7E9 | |||
|association_with_transcript=141bp_to_ENSMUST00000066039,NM_031249,uc008her.1_5end | |||
|cluster_id=chr19:31157472..31157536,+ | |||
|description=CAGE_peak_1_at_Cstf2t_5end | |||
|id=chr19:31157472..31157536,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000540!4.19e-09!33;CL:0000047!4.19e-09!33;CL:0000031!4.19e-09!33;CL:0000404!4.19e-09!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.13e-11,23;CL:0000337,5.13e-11,23;CL:0000540,4.19e-09,33;CL:0000047,4.19e-09,33;CL:0000031,4.19e-09,33;CL:0000404,4.19e-09,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.95e-23!63;UBERON:0001049!1.69e-22!52;UBERON:0005068!1.69e-22!52;UBERON:0006241!1.69e-22!52;UBERON:0007135!1.69e-22!52;UBERON:0003056!4.53e-22!49;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000153!2.50e-21!94;UBERON:0001017!7.83e-21!73;UBERON:0005743!7.83e-21!73;UBERON:0002616!1.21e-20!49;UBERON:0002346!1.53e-20!71;UBERON:0003075!1.53e-20!71;UBERON:0007284!1.53e-20!71;UBERON:0007811!5.04e-20!86;UBERON:0000073!1.73e-19!75;UBERON:0001016!1.73e-19!75;UBERON:0003080!6.57e-19!40;UBERON:0002780!2.50e-18!39;UBERON:0001890!2.50e-18!39;UBERON:0006240!2.50e-18!39;UBERON:0002020!3.95e-16!34;UBERON:0004121!1.74e-14!102;UBERON:0000924!1.74e-14!102;UBERON:0006601!1.74e-14!102;UBERON:0002791!3.65e-14!29;UBERON:0003528!3.65e-14!29;UBERON:0001893!3.65e-14!29;UBERON:0000025!8.55e-13!114;UBERON:0004111!7.94e-11!122;UBERON:0000956!4.83e-10!21;UBERON:0001869!4.83e-10!21;UBERON:0000203!4.83e-10!21;UBERON:0000477!2.30e-08!154;UBERON:0002619!2.47e-08!17;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000483!4.48e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.67e-25,64;UBERON:0003075,2.67e-25,64;UBERON:0007284,2.67e-25,64;UBERON:0000073,7.95e-23,54;UBERON:0010314,1.19e-22,92;UBERON:0001049,1.69e-22,52;UBERON:0005068,1.69e-22,52;UBERON:0006241,1.69e-22,52;UBERON:0007135,1.69e-22,52;UBERON:0003056,4.53e-22,49;UBERON:0001017,7.83e-21,73;UBERON:0010371,1.39e-20,73;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002616,7.83e-20,46;UBERON:0001016,1.73e-19,75;UBERON:0003080,6.57e-19,40;UBERON:0002780,2.50e-18,39;UBERON:0001890,2.50e-18,39;UBERON:0006240,2.50e-18,39;UBERON:0004121,2.57e-17,95;UBERON:0000924,2.57e-17,95;UBERON:0006601,2.57e-17,95;UBERON:0002020,3.95e-16,34;UBERON:0003528,3.65e-14,29;UBERON:0002791,3.65e-14,29;UBERON:0001893,3.65e-14,29;UBERON:0000025,8.55e-13,114;UBERON:0004111,7.94e-11,122;UBERON:0000956,4.83e-10,21;UBERON:0001869,4.83e-10,21;UBERON:0000203,4.83e-10,21;UBERON:0000483,2.27e-08,174;UBERON:0002619,2.47e-08,17;UBERON:0000119,6.77e-08,176;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10 | |||
|phase1_expression=45.1619748835519,16.0528687514106,11.8299802241279,19.0552453123303,15.0268718983904,14.6054966563344,17.7545606852599,36.0254072401998,21.3998857670533,17.7889040004715,38.1816069142876,42.678105062505,44.1697883222511,44.1473032215937,16.9885978525988,17.2103977281352,7.69518065940961,42.5873923233621,39.90030017927,31.8292238848523,37.759220827075,25.5177744586275,29.2543763835608,20.6390225403495,15.8292403936347,13.2073351746455,16.3689558540448,19.6078821744159,31.5438876297581,25.9591033652729,18.4036323843903,19.0509202037889,22.1423323530445,15.8481681015439,15.8868390863201,17.9533416987172,13.0668388007916,32.2269355667419,32.8160844699996,39.2642807980349,23.5292595212406,30.7370468231301,37.86980753643,72.1388767000058,68.4294285731723,45.7031412882587,28.1660883965294,30.0874715805016,27.2410866590745,31.3032137509596,30.2370670710783,12.9377307928474,34.7309994539514,25.3876749703971,21.1739093459752,30.8711323243136,21.7765414353455,24.2365883370398,64.3366345533521,84.1095657042532,60.213983333087,24.0579617769084,25.789549087223,22.497492932035,16.8107281636386,13.4991221839759,17.0772062995491,26.5110630671873,50.1857723573032,53.1923397026861,54.4741649900079,46.56111045782,49.2536846322098,58.3056204263181,59.5200375023248,46.8801581171111,36.3382407297983,54.0117440100344,52.379827840379,66.3388027282875,74.1964789615542,73.4487852485032,54.4406848052693,48.9603470727562,57.7577376596342,50.0868595305235,54.1012387036591,64.1214093639034,24.4595604466185,25.3164726357731,33.0445517119913,24.0918685554788,11.5595126730318,23.746940432064,24.0417274455638,22.8493712419641,28.7911061270091,45.3344658057634,56.1137769942197,38.5140136216271,45.4924245878678,66.7297682554453,43.3168907501298,0,18.6182295269644,17.7351905832569,18.1988800205322,27.5183150122935,31.8493596886021,24.1960686675664,33.6561533926304,27.7063585264048,26.7513976817028,22.0055055206829,21.9890882343768,27.7723166838583,22.9891319992968,22.7020990364261,26.5383165584962,32.6769036893767,25.3967746229453,29.5773904412485,29.8226817948995,61.1911865754134,65.9757126462383,26.5675337416935,27.3178483873498,15.5974710058286,23.63506223559,61.5639527953821,57.6450759551469,57.5496932676919,65.0102957519114,66.4860189058859,62.1286253233085,62.3006450180189,41.3467817232284,27.4939405048306,26.7886123939695,43.3510223126136,49.8361296547155,43.4514977379264,50.5974584753031,44.6086260793717,51.2314838609499,56.6262643659036,53.5036847236052,51.7406741478031,46.7782544664268,51.8150659659825,46.8029990276104,41.2087976963841,47.2680323683516,30.9944428204728,33.9540525073107,45.180778567798,21.7686088067103,20.8451804762919,14.4923384691752,45.1534184127394,42.4492168565784,41.0541500131114,39.5363708427301,40.7301959717126,42.2691889311416,45.1115852815791,48.8257590547307,41.1014005132437,51.3426731730059,39.728526307141,44.5878452502207,47.953595875509,43.6904729429191,35.6989073902589,72.5500322546239,60.9195305285364,29.7376904685418,22.4782981664013,47.5632798693572,37.622340841391,30.5415883333361,29.0424275457613,31.8000602698165,27.7729414124336,35.1151505542939,37.5513616770745,32.673577144035,28.0528625578023,37.6280688139902,28.7622210769351,22.4783571869682,30.2694735346638,45.8996320306458,40.5582219764537,29.3040112750009,39.7120089298363,38.7904974335251,38.7149725794558,40.0919645367791,35.1312152191453,38.3076895932954,30.2323051608411,30.2381679628892,24.1925403288336,21.6214894624523,21.1370385641763,23.1260538382893,25.0824246142514,26.4810885852677,21.28951417136,29.1843408195064,20.5921059891061,40.2550978276593,24.5613025461212,33.7000686963725,39.9074627156437,28.3447913364621,29.4290548031654,28.2672380954905,40.7406535306542,39.9264192282963,41.9270361864715,38.4892007193143,33.8362640032468,33.5641533649279,29.8554481222432,40.3545968911849,35.6558150334528,34.9205943359897,30.9701664812745,30.7379267721294,26.9047248961612,43.729472342389,19.0366989336548,28.0305635620851,37.2514607511389,55.0688523658126,59.5435367888392,67.5411974951903,32.0638077549554,31.8663301610419,33.5777320095109,37.2682478077742,30.3490373399741,30.9690156974528,33.9691836946599,31.9800454323167,34.4861912335348,34.3900366813475,71.0120109292194,32.5042795126935,46.2970569534864,36.486678895201,30.0245623810015,22.5666735177937,35.4459728786273,33.8602383800521,28.2907619633847,27.4630760379119,28.8989039067292,22.224833212467,27.2650297108129,29.5892824059319,18.3301319602773,15.8127912862498,14.4389760547462,41.1931922962083,51.677533986986,59.2462771725016,49.2975180572662,54.6207919618203,55.1159646390398,52.984784633883,47.4965320618775,29.5686352160275,23.7251919367479,21.6117830093863,19.1268053412117,24.0581995776899,22.5570339231303,20.4126708245363,18.2196398717018,37.3095470886209,55.6275906031529,19.6501512917531,40.6582129887548,27.2235955233476,21.2856356415301,19.6839687918276,21.0475919350001,33.6557291387834,35.9675232471801,31.0949941059954,18.1387417422872,46.9758950467986,33.95435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| |||
|short_description=p1@Cstf2t | |||
}} |
Latest revision as of 14:51, 25 September 2015
Short description: | p1@Cstf2t |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cstf2t_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 141bp_to_ENSMUST00000066039, NM_031249, uc008her.1_5end |
EntrezGene: | Cstf2t |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.13e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.13e-11 | 23 |
neuron | 4.19e-09 | 33 |
neuronal stem cell | 4.19e-09 | 33 |
neuroblast | 4.19e-09 | 33 |
electrically signaling cell | 4.19e-09 | 33 |
electrically responsive cell | 7.46e-09 | 39 |
electrically active cell | 7.46e-09 | 39 |