FFCP PHASE1:Hg19::chr6:138866863..138866887,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAK2 | |||
|association_with_transcript=-15bp_to_ENST00000342260_5end | |||
|cluster_id=chr6:138866863..138866887,- | |||
|coexpression_cluster_id=C4565 | |||
|description=CAGE_peak_2_at_NHSL1_5end | |||
|id=chr6:138866863..138866887,- | |||
|ontology_enrichment_celltype=CL:0000222!6.19e-29!119;CL:0000115!7.71e-19!35;CL:0000055!1.05e-18!180;CL:0002139!1.01e-17!24;CL:0002078!1.55e-16!44;CL:0000213!3.96e-16!57;CL:0000215!3.96e-16!57;CL:0000183!1.27e-15!59;CL:0000187!2.27e-15!54;CL:0000680!8.48e-15!57;CL:0000056!8.48e-15!57;CL:0000355!8.48e-15!57;CL:0000220!2.13e-14!246;CL:0002321!7.15e-14!248;CL:0000393!1.65e-13!60;CL:0000211!1.65e-13!60;CL:0000071!2.43e-13!18;CL:0002546!2.43e-13!18;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000359!4.80e-09!32;CL:0000057!1.61e-08!75;CL:0002494!4.34e-08!16;CL:1000413!2.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.47e-20;24!CL:0000115;1.78e-19;36!CL:0000071;2.13e-15;18!CL:0002078;2.07e-14;45!CL:0000213;7.25e-12;58!CL:0000215;7.25e-12;58!CL:0000187;2.00e-09;55!CL:0000359;3.20e-09;32!CL:0002494;4.15e-09;16!CL:0000192;2.06e-08;43!CL:1000413;2.79e-08;9!CL:0000393;3.38e-07;61!CL:0000211;3.38e-07;61!CL:0002138;9.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.06e-33,121;CL:0000115,2.60e-23,36;CL:0002078,2.47e-21,45;CL:0002139,1.62e-20,24;CL:0000213,5.11e-19,58;CL:0000215,5.11e-19,58;CL:0000187,2.58e-16,55;CL:0002321,6.39e-16,250;CL:0000680,7.42e-16,58;CL:0000056,7.42e-16,58;CL:0000355,7.42e-16,58;CL:0000071,2.26e-15,18;CL:0002546,2.26e-15,18;CL:0000393,4.83e-13,61;CL:0000211,4.83e-13,61;CL:0000192,1.55e-11,43;CL:0000514,1.55e-11,43;CL:0002494,3.23e-09,16;CL:0000359,3.25e-09,32;CL:1000413,2.80e-08,9;CL:0000057,5.25e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;2.13e-15;18!CL:0000222;4.93e-10;121!CL:0000355;2.82e-09;58!CL:0000514;2.06e-08;43!CL:0005022;9.98e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.90e-33!79;UBERON:0007798!1.90e-33!79;UBERON:0001009!1.04e-31!113;UBERON:0004535!1.09e-29!110;UBERON:0004872!5.26e-29!84;UBERON:0000119!9.98e-29!312;UBERON:0000055!2.14e-27!69;UBERON:0003914!2.15e-27!118;UBERON:0000483!4.90e-27!309;UBERON:0001981!5.16e-24!60;UBERON:0007500!5.16e-24!60;UBERON:0004537!5.16e-24!60;UBERON:0006965!5.16e-24!60;UBERON:0000490!1.23e-22!138;UBERON:0000025!8.18e-22!194;UBERON:0004111!7.51e-19!241;UBERON:0000477!1.00e-18!286;UBERON:0004290!3.16e-17!70;UBERON:0002385!1.50e-16!63;UBERON:0001015!1.50e-16!63;UBERON:0000383!1.50e-16!63;UBERON:0001134!3.44e-16!61;UBERON:0002036!3.44e-16!61;UBERON:0003082!3.44e-16!61;UBERON:0007100!1.05e-14!27;UBERON:0001637!1.77e-14!42;UBERON:0003509!1.77e-14!42;UBERON:0004572!1.77e-14!42;UBERON:0000914!3.99e-14!83;UBERON:0002329!3.99e-14!83;UBERON:0003077!3.99e-14!83;UBERON:0003059!3.99e-14!83;UBERON:0007282!3.99e-14!83;UBERON:0009618!3.99e-14!83;UBERON:0007285!3.99e-14!83;UBERON:0000475!5.28e-14!365;UBERON:0001986!2.43e-13!18;UBERON:0004638!2.43e-13!18;UBERON:0004852!2.43e-13!18;UBERON:0000481!4.78e-13!347;UBERON:0005256!5.27e-13!143;UBERON:0000486!8.53e-13!82;UBERON:0000948!1.27e-12!24;UBERON:0005498!1.27e-12!24;UBERON:0004140!1.27e-12!24;UBERON:0009881!1.27e-12!24;UBERON:0004141!1.27e-12!24;UBERON:0003084!1.27e-12!24;UBERON:0007005!1.27e-12!24;UBERON:0004139!1.27e-12!24;UBERON:0004291!1.27e-12!24;UBERON:0006914!2.64e-12!25;UBERON:0000487!3.66e-12!22;UBERON:0004573!9.88e-12!33;UBERON:0004571!9.88e-12!33;UBERON:0000468!4.03e-11!659;UBERON:0000947!7.58e-11!21;UBERON:0010191!7.58e-11!21;UBERON:0002100!1.53e-10!216;UBERON:0000467!1.27e-09!625;UBERON:0000480!1.87e-09!626;UBERON:0003915!2.75e-07!9;UBERON:0004700!2.75e-07!9;UBERON:0001917!2.75e-07!9;UBERON:0001048!4.41e-07!168;UBERON:0001135!7.43e-07!15;UBERON:0003103!7.66e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.07e-16;25!UBERON:0004638;2.13e-15;18!UBERON:0001986;2.13e-15;18!UBERON:0004852;2.13e-15;18!UBERON:0000055;3.17e-14;65!UBERON:0007500;4.20e-14;56!UBERON:0001981;4.20e-14;56!UBERON:0004537;4.20e-14;56!UBERON:0002049;5.26e-14;75!UBERON:0007798;5.26e-14;75!UBERON:0006914;1.05e-13;25!UBERON:0000948;1.96e-13;22!UBERON:0000487;2.67e-13;22!UBERON:0000947;1.41e-12;21!UBERON:0010191;1.41e-12;21!UBERON:0004573;2.46e-12;33!UBERON:0004571;2.46e-12;33!UBERON:0001637;3.77e-12;42!UBERON:0003509;3.77e-12;42!UBERON:0004572;3.77e-12;42!UBERON:0002385;7.06e-12;31!UBERON:0001015;7.06e-12;31!UBERON:0000383;7.06e-12;31!UBERON:0000490;1.11e-10;33!UBERON:0001009;1.36e-10;112!UBERON:0004535;5.05e-10;109!UBERON:0003914;1.02e-08;74!UBERON:0003915;2.79e-08;9!UBERON:0004700;2.79e-08;9!UBERON:0001917;2.79e-08;9!UBERON:0001135;8.71e-08;15!UBERON:0006876;5.80e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.73e-37,112;UBERON:0002049,1.57e-36,78;UBERON:0007798,1.57e-36,78;UBERON:0004535,8.97e-35,109;UBERON:0003914,1.83e-31,117;UBERON:0004872,4.59e-31,83;UBERON:0000055,1.06e-29,68;UBERON:0007500,2.89e-26,59;UBERON:0001981,2.89e-26,59;UBERON:0004537,2.89e-26,59;UBERON:0006965,2.89e-26,59;UBERON:0000490,1.33e-25,148;UBERON:0000119,5.76e-25,309;UBERON:0000483,3.00e-23,306;UBERON:0007503,5.11e-20,78;UBERON:0005256,8.65e-19,122;UBERON:0002329,6.84e-18,71;UBERON:0003059,6.84e-18,71;UBERON:0007282,6.84e-18,71;UBERON:0004290,6.84e-18,71;UBERON:0009618,6.84e-18,71;UBERON:0002385,6.88e-18,64;UBERON:0001015,6.88e-18,64;UBERON:0000383,6.88e-18,64;UBERON:0001134,1.84e-17,62;UBERON:0002036,1.84e-17,62;UBERON:0003082,1.84e-17,62;UBERON:0007524,2.10e-17,73;UBERON:0003077,2.39e-17,72;UBERON:0007285,2.39e-17,72;UBERON:0007100,5.66e-17,27;UBERON:0000025,8.06e-17,192;UBERON:0001637,2.09e-15,42;UBERON:0003509,2.09e-15,42;UBERON:0004572,2.09e-15,42;UBERON:0004638,2.26e-15,18;UBERON:0001986,2.26e-15,18;UBERON:0004852,2.26e-15,18;UBERON:0003104,1.09e-14,160;UBERON:0009142,1.09e-14,160;UBERON:0000948,1.57e-14,24;UBERON:0005498,1.57e-14,24;UBERON:0004140,1.57e-14,24;UBERON:0009881,1.57e-14,24;UBERON:0004141,1.57e-14,24;UBERON:0003084,1.57e-14,24;UBERON:0007005,1.57e-14,24;UBERON:0004139,1.57e-14,24;UBERON:0004291,1.57e-14,24;UBERON:0000486,3.18e-14,83;UBERON:0006914,1.01e-13,25;UBERON:0004111,2.16e-13,240;UBERON:0000487,2.47e-13,22;UBERON:0004573,1.29e-12,33;UBERON:0004571,1.29e-12,33;UBERON:0000947,1.90e-12,21;UBERON:0010191,1.90e-12,21;UBERON:0002100,1.24e-11,199;UBERON:0000926,6.24e-10,315;UBERON:0004120,6.24e-10,315;UBERON:0006603,6.24e-10,315;UBERON:0003915,2.80e-08,9;UBERON:0004700,2.80e-08,9;UBERON:0001917,2.80e-08,9;UBERON:0001048,3.76e-08,160;UBERON:0001135,8.96e-08,15;UBERON:0003103,1.01e-07,68;UBERON:0006876,5.48e-07,11 | |||
|phase1_expression=2.18014055124668,3.21150785836475,5.21531295155093,2.00146596706261,3.5756887554183,1.74467704820074,7.59899634504932,1.26343974685366,1.30592814099919,0.982935746006035,5.58240934377942,0,0,0.990130823680373,1.32558950291166,6.05092631806598,10.8485015044316,8.76372108464848,7.80692478064811,10.8346531107573,15.9120539170517,7.20945859399602,0.286235987131057,0.547497700291537,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,6.70700859703636,2.9408389224012,0.722878304769133,1.50401373190767,0.869079113764942,0,0.486634870302636,3.21418378357831,1.99556457716308,5.00658278450818,3.99486180268024,0,0,0,0,0,0,0,0,11.3294572199022,8.60234595106124,17.7041655819873,13.5673906061762,9.22898759661793,7.42818713238182,12.121708059135,16.0218390684984,21.3459757612026,36.8192674041137,30.6150281002952,33.4519726516146,20.2571507764981,26.4717417849025,11.3419872703446,9.82297011124877,11.0019392586823,11.0359250873656,10.7321646226118,15.1882505530901,14.6561395144326,0,0,0,5.4666914686485,3.41902381494365,4.36950296683622,11.1866282092037,2.12801029319014,3.92474320099615,7.47242970107935,2.4666754841716,5.91300967259556,6.19669091520565,4.90385709340376,9.08144565869588,8.06646294271999,7.26396438684769,0,5.70471821544449,0.298897361103602,0.939475989150119,1.94247533241758,2.10676210053373,0,0.245668634623536,0,0,3.21447008062124,1.82032272387605,0.718618141816238,0.336672227908132,1.62654075833553,0,0,0,1.20190447125277,5.21788042536097,0.538168907066586,2.56268866582281,0.635795703478686,0.300091096084402,0.206105058476878,2.83404594050192,1.48893485065272,1.18143432568886,0.876933046450788,1.7670364197088,1.74894807420369,3.39456719319505,1.42003837006646,1.30977727695932,1.01736355386293,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0.36497735907583,6.25798129319264,1.92972281457866,4.14404764057442,3.71494342425583,1.44375896333917,0,0,0,0,0,0,0,0,0,16.2394200017423,8.41450642820675,9.4662022606222,7.3504355692771,1.26755034821831,0,4.72631925345123,0,9.71608664490597,4.11762744716461,0,0,0,0,5.86454949558584,2.07986957055916,7.21656710126366,3.59384255422738,3.75707821554629,30.6056869253477,18.5194205030644,18.2643986145214,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,1.58744735730423,2.29193055334967,2.34434894420094,0,1.13110241973656,0.901029173531752,0.857479297891735,30.4996549419381,40.9802464703283,17.1611588821023,0.517086863031111,3.57656445851882,3.381211010224,1.59562869950922,3.12022310734098,0.514414748524284,0,0,1.85871391755592,1.62786481617433,0,1.62868092146868,1.42156779497018,0.791951872933429,6.63166629531089,3.48613383440118,14.7960026949444,0,0,0,3.59437283237374,4.59447743336456,4.27910715122155,1.01346914667305,0,1.43248770591916,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,2.33113834266366,0,1.08506009479894,0,0,0,0,0.601892199455438,0,6.2083842775503,0,0,3.47534457872331,7.83204629850962,6.51972505240626,0,0,0,0,0,0.30239029332968,3.96972492510043,3.37616341233737,2.24528075546459,6.91951405980785,3.58195074346692,0.64341568457443,1.48418066444991,4.93471020168498,1.59805552781814,7.88420697732568,7.2695620085707,3.60252173225874,3.14234568938218,0,0.0920809889358963,0.229628896329213,0,0.262248829918848,0,0,0,0,0,31.8453475398511,27.385086549519,10.5798798890048,18.5072703228347,0,0,0,0,0,0,0,1.02580050046556,10.8244833080903,4.88067591996455,3.19427136107939,0,0,0.574265537996172,0,1.6068392984416,2.99679226705578,1.54048617114644,3.37708084397485,4.27293374702045,9.02330056893499,3.33538396002726,3.40906509664404,7.47869099432594,0,0,0,0,3.253918845081,4.40737285562896,2.0911118104818,4.00443654228915,1.59691809095107,4.34966496037536,4.26245703939016,0.429374660225974,9.67611760335135,4.42931194606216,5.52827562379092,3.32667128704734,8.55877976067841,1.27281299170375,4.70969184119538,14.7495415218318,5.4907405947211,2.5918728516051,3.03273722359974,3.17020642346017,6.7401352998237,8.28977356452303,5.84912375115083,1.05650146756755,0.272999822815972,0.282810863907425,4.52032466480971,1.65409603063837,0,0.438450885253763,1.73632660280006,3.9353685122798,0.202910376962704,1.54911749049875,3.94373843545138,3.44187245289724,2.35797698431491,1.426684205925,1.06428319221179,7.17765960012058,15.8061548620753,5.31262443272001,6.64875968465468,0.0962221127255121,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12778627451629,0,0,3.40963376167696,0.47748896947538,0,0,0,0.984685914873589,0,0,0,3.38721580026819,1.65770349318689,0,2.35217969754956,0,0,0,0,0,2.17015492401254,0,0,0.969332746095218,1.02044907978036,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.60298219312704,0,0.552896299656123,0.591095237907095,0.87754158861589,0,0,1.07730361905316,0.227884111694002,0.23056390438806,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| |||
|short_description=p2@NHSL1 | |||
}} |
Latest revision as of 05:06, 25 September 2015
Short description: | p2@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NHSL1_5end |
Coexpression cluster: | C4565_heart_Meningeal_Endothelial_mesothelioma_Lymphatic_Renal_skeletal |
Association with transcript: | -15bp_to_ENST00000342260_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E9PAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.06e-33 | 121 |
endothelial cell | 2.60e-23 | 36 |
meso-epithelial cell | 2.47e-21 | 45 |
endothelial cell of vascular tree | 1.62e-20 | 24 |
lining cell | 5.11e-19 | 58 |
barrier cell | 5.11e-19 | 58 |
muscle cell | 2.58e-16 | 55 |
embryonic cell | 6.39e-16 | 250 |
muscle precursor cell | 7.42e-16 | 58 |
myoblast | 7.42e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.42e-16 | 58 |
blood vessel endothelial cell | 2.26e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.26e-15 | 18 |
electrically responsive cell | 4.83e-13 | 61 |
electrically active cell | 4.83e-13 | 61 |
smooth muscle cell | 1.55e-11 | 43 |
smooth muscle myoblast | 1.55e-11 | 43 |
cardiocyte | 3.23e-09 | 16 |
vascular associated smooth muscle cell | 3.25e-09 | 32 |
endothelial cell of artery | 2.80e-08 | 9 |
fibroblast | 5.25e-07 | 76 |