FFCP PHASE1:Hg19::chr6:159084188..159084212,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |||
|TSSclassifier=strong | |||
|UniProt=F8W7H4 | |||
|association_with_transcript=0bp_to_ENST00000367081_5end | |||
|cluster_id=chr6:159084188..159084212,+ | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_4_at_SYTL3_5end | |||
|id=chr6:159084188..159084212,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.56e-20!42;CL:0000738!3.14e-19!140;CL:0000766!4.24e-18!76;CL:0000860!6.26e-18!45;CL:0000839!1.72e-15!70;CL:0000037!3.55e-15!172;CL:0000566!3.55e-15!172;CL:0002031!9.14e-15!124;CL:0000557!2.98e-14!71;CL:0000988!2.02e-13!182;CL:0002087!1.45e-12!119;CL:0002032!7.47e-12!165;CL:0000837!7.47e-12!165;CL:0002194!3.20e-11!63;CL:0000576!3.20e-11!63;CL:0000040!3.20e-11!63;CL:0000559!3.20e-11!63;CL:0002009!3.43e-11!65;CL:0000763!6.25e-11!112;CL:0000049!6.25e-11!112;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9;CL:0002274!7.89e-07!5;CL:0000457!7.89e-07!5;CL:0002191!7.89e-07!5;CL:0000097!7.89e-07!5;CL:0000831!7.89e-07!5;CL:0002028!7.89e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.14e-17;5!CL:0000767;8.26e-11;3!CL:0000226;1.07e-10;3!CL:0000842;1.07e-10;3!CL:0000094;2.29e-10;8!CL:0000766;6.25e-10;69!CL:0000163;1.82e-09;9!CL:0000081;2.02e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.59e-18,72;CL:0000097,2.06e-17,5;CL:0002028,2.06e-17,5;CL:0000738,3.64e-15,136;CL:0000037,1.01e-12,168;CL:0000839,7.19e-12,66;CL:0000988,1.17e-11,177;CL:0000557,1.26e-11,67;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0000767,9.16e-11,3;CL:0000226,1.08e-10,3;CL:0000842,1.08e-10,3;CL:0000094,2.42e-10,8;CL:0000163,1.78e-09,9;CL:0000860,4.04e-09,42;CL:0002057,4.04e-09,42;CL:0002032,8.04e-09,161;CL:0000837,8.04e-09,161;CL:0002031,1.04e-07,120;CL:0000473,1.22e-07,48;CL:0000234,1.22e-07,48;CL:0000081,2.10e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.10e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.68e-18!102;UBERON:0003061!1.68e-18!102;UBERON:0002193!1.30e-16!112;UBERON:0002371!1.39e-12!80;UBERON:0001474!2.22e-11!86;UBERON:0002405!1.05e-08!115;UBERON:0004765!1.64e-08!101;UBERON:0001434!1.64e-08!101;UBERON:0002204!2.03e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.24e-12;15!UBERON:0000179;3.24e-12;15!UBERON:0000463;3.24e-12;15!UBERON:0002390;2.93e-09;32!UBERON:0002370;7.35e-08;2!UBERON:0005058;7.35e-08;2!UBERON:0009113;7.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-20,98;UBERON:0003061,1.33e-20,98;UBERON:0002193,5.38e-18,108;UBERON:0000178,3.04e-12,15;UBERON:0000179,3.04e-12,15;UBERON:0000463,3.04e-12,15;UBERON:0002371,5.29e-11,76;UBERON:0002405,1.99e-10,93;UBERON:0001474,7.32e-10,82;UBERON:0004765,1.39e-08,90;UBERON:0003081,1.25e-07,203;UBERON:0001434,2.76e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,42.4833418996816,2.30297638858328,4.18003532953405,1.83884244895785,0,0.369754010166788,0,0,2.05520307534393,1.66198622559563,2.00544447470142,2.38711957787437,0,0,0,0.872389432677388,0,1.21292030593908,0.464858073811369,1.23350366406548,0.309706370895104,0,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,2.70852973188684,1.12945403725563,0.272906150057846,0,0.306083892370903,0.320929027076094,0,1.31940520074686,0.997318288108159,0,0.580418477257168,0,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0.633765858935825,0.637812899895131,0.209658645508376,2.47122988522289,2.55300717830561,1.44653028027372,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,1.12101712596307,0,4.52432471261816,1.57204305099666,0.411202997999018,0,0.32592226663359,0,0,0,0.589211814949674,0,0,0.384273959177026,0,0,0,0,17.201241326799,18.7278579662799,8.36284190439814,0,0.383220493601921,0.34362744548263,0.253019692019503,0.95569624297229,0,0,0.602300476311091,0.639933055772092,0,0.236777252044017,0,0,0.802320587350522,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0.324547393654683,0,0.132957960518865,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3019074231905,4.84266387072743,7.04915592838625,22.0503528727951,8.8369703398466,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0.197030760201927,0.431255149719035,1.28343036279748,0,0,0,0.167516265334349,0,0.749007023947182,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,4.34212854858063,4.96142661882819,3.09509917629989,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0.773365746336976,0,0,0,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,3.26672954583968,0.0941438007767792,0,0,0,0,1.52234282769651,3.0585488285695,1.70894156152249,0.476463550915578,0,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.471612915298998,0,0,0,0,0,1.63205341010842,0.7520696820681,1.83807346058077,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0.477890301491107,0,0,0,0,0.521745061811734,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,1.88719130227076,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.225630985047772,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,1.02041020705668,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| |||
|short_description=p4@SYTL3 | |||
}} |
Latest revision as of 12:13, 16 September 2015
Short description: | p4@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYTL3_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | 0bp_to_ENST00000367081_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | F8W7H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.59e-18 | 72 |
mast cell | 2.06e-17 | 5 |
basophil mast progenitor cell | 2.06e-17 | 5 |
leukocyte | 3.64e-15 | 136 |
hematopoietic stem cell | 1.01e-12 | 168 |
myeloid lineage restricted progenitor cell | 7.19e-12 | 66 |
hematopoietic cell | 1.17e-11 | 177 |
granulocyte monocyte progenitor cell | 1.26e-11 | 67 |
myeloid cell | 1.69e-11 | 108 |
common myeloid progenitor | 1.69e-11 | 108 |
basophil | 9.16e-11 | 3 |
single nucleate cell | 1.08e-10 | 3 |
mononuclear cell | 1.08e-10 | 3 |
granulocyte | 2.42e-10 | 8 |
endocrine cell | 1.78e-09 | 9 |
classical monocyte | 4.04e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.04e-09 | 42 |
hematopoietic oligopotent progenitor cell | 8.04e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.04e-07 | 120 |
defensive cell | 1.22e-07 | 48 |
phagocyte | 1.22e-07 | 48 |
blood cell | 2.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-20 | 98 |
blood island | 1.33e-20 | 98 |
hemolymphoid system | 5.38e-18 | 108 |
blood | 3.04e-12 | 15 |
haemolymphatic fluid | 3.04e-12 | 15 |
organism substance | 3.04e-12 | 15 |
bone marrow | 5.29e-11 | 76 |
immune system | 1.99e-10 | 93 |
bone element | 7.32e-10 | 82 |
skeletal element | 1.39e-08 | 90 |
lateral plate mesoderm | 1.25e-07 | 203 |
skeletal system | 2.76e-07 | 100 |