FFCP PHASE1:Mm9::chr2:126501197..126501245,-: Difference between revisions
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{{FFCP|EntrezGene=14391|HGNC=|MCL_coexpression_id=3310|UniProt=Q00420,Q3US22,A2AQ66,Q6WJ10|association_with_transcript=0bp_to_ENSMUST00000103226,ENSMUST00000110424,NM_010249,NM_207669,uc008mdt.1,uc008mdu.1,uc008mdv.1,uc008mdx.1,uc008mdz.1,uc012cdi.1_5end|description=CAGE_peak_1_at_Gabpb1_5end|id=chr2:126501197..126501245,-|ontology_enrichment_celltype=CL:0000542!1.55e-07!13;CL:0000051!1.55e-07!13;CL:0000838!3.31e-07!12;CL:0000084!5.72e-07!11;CL:0000827!5.72e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,1.55e-07,13;CL:0000051,1.55e-07,13;CL:0000838,3.31e-07,12;CL:0000084,5.72e-07,11;CL:0000827,5.72e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.44e-10!41;UBERON:0001004!6.23e-10!42;UBERON:0004177!3.45e-09!29;UBERON:0002370!1.03e-08!23;UBERON:0000974!1.03e-08!23;UBERON:0004807!1.03e-08!23;UBERON:0005058!1.03e-08!23;UBERON:0003351!1.03e-08!23;UBERON:0009113!1.03e-08!23;UBERON:0003295!1.03e-08!23;UBERON:0009722!1.03e-08!23;UBERON:0005562!1.03e-08!23;UBERON:0007690!1.03e-08!23;UBERON:0006562!4.93e-08!24;UBERON:0001557!4.93e-08!24;UBERON:0001042!4.93e-08!24;UBERON:0008814!4.93e-08!24;UBERON:0009145!4.93e-08!24;UBERON:0003408!6.31e-08!24;UBERON:0000072!1.75e-07!27;UBERON:0002193!7.08e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.44e-10,41;UBERON:0001004,6.23e-10,42;UBERON:0000153,7.88e-10,43;UBERON:0004177,3.45e-09,29;UBERON:0005057,3.45e-09,29;UBERON:0002370,1.03e-08,23;UBERON:0000974,1.03e-08,23;UBERON:0004807,1.03e-08,23;UBERON:0005058,1.03e-08,23;UBERON:0003351,1.03e-08,23;UBERON:0009113,1.03e-08,23;UBERON:0003295,1.03e-08,23;UBERON:0009722,1.03e-08,23;UBERON:0005562,1.03e-08,23;UBERON:0007690,1.03e-08,23;UBERON:0007811,1.85e-08,36;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0003408,6.31e-08,24;UBERON:0000077,9.65e-08,35;UBERON:0000072,1.75e-07,27;UBERON:0001048,2.42e-07,134;UBERON:0002193,7.08e-07,48;UBERON:0002405,7.08e-07,48|phase1_expression=6.56610273129655,11.5161884520989,7.73498706962211,3.32710632437513,3.50627010962443,9.73699777088961,8.64366770203445,16.7860320474049,67.7193753549517,62.0270994753283,45.7151975162098,38.6097249537428,10.9568467155972,9.87850547334671,6.32908547449759,7.89653542820321,13.2916756844348,9.30613387806801,8.91243818437302,8.06340338416257,3.99703463710028,10.7234227296956,9.14199261986274,6.23970448894286,8.02932483735095,7.46501553349526,8.18447792702242,10.3426191689227,5.51067916423484,3.52842181663903,3.76941868114018,6.35030673459631,5.53558308826113,0,8.37669697278696,6.15068187826422,5.51257261908397,14.6486070757918,12.5013655123808,14.6586648312664,25.2939539853336,17.0761371239611,22.8189865924642,4.15459499319405,5.17022349219524,5.50640256485045,2.34717403304412,2.18025156380447,1.09843091367236,1.1665793944457,1.67983705950435,1.43752564364972,9.56360854529097,15.9579671242496,10.4189077734164,7.46052364504246,6.30373567865265,8.76642556871652,6.87875966922632,14.8117474196169,8.23980824558033,4.74382344896785,3.55717918444456,6.29929802096979,4.94433181283487,2.8419204597844,2.99600110518405,1.53687322128622,10.8874092923902,11.2054928815303,12.4091727197315,5.71301968807607,4.41737081903227,14.2089327089347,13.1308295294984,9.19218786610021,5.50579404996943,2.80912143787413,2.76491759861238,10.0233578674947,8.23388792421687,9.89735404057844,3.35019598801657,5.06486349028512,2.90316670775939,3.53554302568401,2.42031857358475,6.15118171223492,5.45228591998925,3.70300644523249,18.2614627882057,3.44169550792555,4.0798280022465,1.07940638327563,1.29955283489534,3.13618820968135,4.91555470461132,7.83979483859066,3.63700406444016,6.36011234118612,9.15482228548423,2.56652954828636,7.64415719119937,0,8.22665955842614,5.32055717497707,5.56076889516262,3.88225191044804,10.616453229534,4.30482203287992,4.8575891494518,5.1759131313064,4.15107895060905,3.76806601381556,5.17390311397101,3.26733137457156,4.6967043869531,4.04878199375753,9.73071607144862,8.8971767471075,7.06692859073259,7.75800405016355,3.72783522436244,2.63502717310392,4.60782754989601,2.04365644166873,27.9169240098794,14.9975682748352,16.9003402007176,3.74476598512057,1.37250180845588,5.90575454930463,3.12883776346098,3.58001640262463,2.0778804455956,2.27137768294861,8.7581852911272,7.46441823660558,2.27450482590307,2.94618598241064,8.45782879257574,12.8745178482745,8.64298223065676,11.6042709733501,10.1374383735478,9.09607414022434,10.026084527891,4.9153640440413,20.47895932862,12.4810012910761,12.6684809398043,9.86380795924087,9.45360647367033,4.52727816478817,5.96768195583036,7.76233640592123,3.51106593656617,6.94839349209731,12.5031939734061,8.69928244649108,6.80125573945179,6.30217215113552,6.62885259638589,6.49321964766433,7.40482141859416,4.41814495025775,4.02410102099429,5.83826711835847,7.07607354627966,6.23836363500562,4.53985333456792,5.11699955988663,4.61055242111206,5.63666958793561,4.20579897128254,5.865562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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14391 | |||
|HGNC= | |||
|MCL_coexpression_id=3310 | |||
|TSSclassifier=NA | |||
|UniProt=Q00420,Q3US22,A2AQ66,Q6WJ10 | |||
|association_with_transcript=0bp_to_ENSMUST00000103226,ENSMUST00000110424,NM_010249,NM_207669,uc008mdt.1,uc008mdu.1,uc008mdv.1,uc008mdx.1,uc008mdz.1,uc012cdi.1_5end | |||
|cluster_id=chr2:126501197..126501245,- | |||
|description=CAGE_peak_1_at_Gabpb1_5end | |||
|id=chr2:126501197..126501245,- | |||
|ontology_enrichment_celltype=CL:0000542!1.55e-07!13;CL:0000051!1.55e-07!13;CL:0000838!3.31e-07!12;CL:0000084!5.72e-07!11;CL:0000827!5.72e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.55e-07,13;CL:0000051,1.55e-07,13;CL:0000838,3.31e-07,12;CL:0000084,5.72e-07,11;CL:0000827,5.72e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.44e-10!41;UBERON:0001004!6.23e-10!42;UBERON:0004177!3.45e-09!29;UBERON:0002370!1.03e-08!23;UBERON:0000974!1.03e-08!23;UBERON:0004807!1.03e-08!23;UBERON:0005058!1.03e-08!23;UBERON:0003351!1.03e-08!23;UBERON:0009113!1.03e-08!23;UBERON:0003295!1.03e-08!23;UBERON:0009722!1.03e-08!23;UBERON:0005562!1.03e-08!23;UBERON:0007690!1.03e-08!23;UBERON:0006562!4.93e-08!24;UBERON:0001557!4.93e-08!24;UBERON:0001042!4.93e-08!24;UBERON:0008814!4.93e-08!24;UBERON:0009145!4.93e-08!24;UBERON:0003408!6.31e-08!24;UBERON:0000072!1.75e-07!27;UBERON:0002193!7.08e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.44e-10,41;UBERON:0001004,6.23e-10,42;UBERON:0000153,7.88e-10,43;UBERON:0004177,3.45e-09,29;UBERON:0005057,3.45e-09,29;UBERON:0002370,1.03e-08,23;UBERON:0000974,1.03e-08,23;UBERON:0004807,1.03e-08,23;UBERON:0005058,1.03e-08,23;UBERON:0003351,1.03e-08,23;UBERON:0009113,1.03e-08,23;UBERON:0003295,1.03e-08,23;UBERON:0009722,1.03e-08,23;UBERON:0005562,1.03e-08,23;UBERON:0007690,1.03e-08,23;UBERON:0007811,1.85e-08,36;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0003408,6.31e-08,24;UBERON:0000077,9.65e-08,35;UBERON:0000072,1.75e-07,27;UBERON:0001048,2.42e-07,134;UBERON:0002193,7.08e-07,48;UBERON:0002405,7.08e-07,48 | |||
|phase1_expression=6.56610273129655,11.5161884520989,7.73498706962211,3.32710632437513,3.50627010962443,9.73699777088961,8.64366770203445,16.7860320474049,67.7193753549517,62.0270994753283,45.7151975162098,38.6097249537428,10.9568467155972,9.87850547334671,6.32908547449759,7.89653542820321,13.2916756844348,9.30613387806801,8.91243818437302,8.06340338416257,3.99703463710028,10.7234227296956,9.14199261986274,6.23970448894286,8.02932483735095,7.46501553349526,8.18447792702242,10.3426191689227,5.51067916423484,3.52842181663903,3.76941868114018,6.35030673459631,5.53558308826113,0,8.37669697278696,6.15068187826422,5.51257261908397,14.6486070757918,12.5013655123808,14.6586648312664,25.2939539853336,17.0761371239611,22.8189865924642,4.15459499319405,5.17022349219524,5.50640256485045,2.34717403304412,2.18025156380447,1.09843091367236,1.1665793944457,1.67983705950435,1.43752564364972,9.56360854529097,15.9579671242496,10.4189077734164,7.46052364504246,6.30373567865265,8.76642556871652,6.87875966922632,14.8117474196169,8.23980824558033,4.74382344896785,3.55717918444456,6.29929802096979,4.94433181283487,2.8419204597844,2.99600110518405,1.53687322128622,10.8874092923902,11.2054928815303,12.4091727197315,5.71301968807607,4.41737081903227,14.2089327089347,13.1308295294984,9.19218786610021,5.50579404996943,2.80912143787413,2.76491759861238,10.0233578674947,8.23388792421687,9.89735404057844,3.35019598801657,5.06486349028512,2.90316670775939,3.53554302568401,2.42031857358475,6.15118171223492,5.45228591998925,3.70300644523249,18.2614627882057,3.44169550792555,4.0798280022465,1.07940638327563,1.29955283489534,3.13618820968135,4.91555470461132,7.83979483859066,3.63700406444016,6.36011234118612,9.15482228548423,2.56652954828636,7.64415719119937,0,8.22665955842614,5.32055717497707,5.56076889516262,3.88225191044804,10.616453229534,4.30482203287992,4.8575891494518,5.1759131313064,4.15107895060905,3.76806601381556,5.17390311397101,3.26733137457156,4.6967043869531,4.04878199375753,9.73071607144862,8.8971767471075,7.06692859073259,7.75800405016355,3.72783522436244,2.63502717310392,4.60782754989601,2.04365644166873,27.9169240098794,14.9975682748352,16.9003402007176,3.74476598512057,1.37250180845588,5.90575454930463,3.12883776346098,3.58001640262463,2.0778804455956,2.27137768294861,8.7581852911272,7.46441823660558,2.27450482590307,2.94618598241064,8.45782879257574,12.8745178482745,8.64298223065676,11.6042709733501,10.1374383735478,9.09607414022434,10.026084527891,4.9153640440413,20.47895932862,12.4810012910761,12.6684809398043,9.86380795924087,9.45360647367033,4.52727816478817,5.96768195583036,7.76233640592123,3.51106593656617,6.94839349209731,12.5031939734061,8.69928244649108,6.80125573945179,6.30217215113552,6.62885259638589,6.49321964766433,7.40482141859416,4.41814495025775,4.02410102099429,5.83826711835847,7.07607354627966,6.23836363500562,4.53985333456792,5.11699955988663,4.61055242111206,5.63666958793561,4.20579897128254,5.86556290561921,4.29544417878937,1.85115396664481,10.024547775156,6.27039014023184,8.37638498593607,3.02525286935014,4.44756087689741,3.04361001780095,1.89811624617805,4.44687177754829,5.7807098024062,5.17286827306992,6.23885078781184,4.49409704327111,3.02593269824572,4.97853183135918,12.3284135619503,7.76889885746156,10.1436962105772,7.33144780243131,5.23671715352589,7.64480436804472,4.99568643281633,3.54264355151045,4.70996183524124,4.07210640941942,2.37162101669719,7.84171996865642,9.82794975566015,8.7696223830093,7.1001042485976,10.3706178693539,5.0925170356284,7.76779571117189,5.83686816390127,6.58947391651396,7.18841032636773,3.72140947668503,2.18426371180192,3.28352541331245,2.87035861635059,2.8946611281802,8.12914036733061,10.2325362356062,12.548303186036,9.33597971763535,9.85699042811709,8.71032538697442,7.85544014923845,8.00047956216975,9.77337893458384,6.64394068946325,8.45110273884682,9.01248230936559,10.7064688756855,7.66640010482011,4.52373851817817,3.80733978673097,4.91764273019036,3.31124095565679,2.40825884981688,4.92289083687253,9.67216177722385,3.02965112645248,3.47059041357882,6.63745865304285,6.24727853425117,6.69112634267146,7.12955757063661,5.94460714656548,6.07216052512342,6.72188473196017,7.11518000303742,2.57057053137446,4.82596289708113,6.23229612835393,6.02681749608232,3.13443233647817,0,5.58395463156457,7.86041248108353,4.71512699389745,4.42952839321159,4.61152721915891,3.87642439752332,5.45300594216258,6.41695281092498,2.21225730555071,2.10837217149998,1.03135543248187,6.80879211507576,7.74262704334634,6.85601024048599,9.00215547132688,7.27094957933322,9.63191615051181,8.22745103010605,5.17590413494819,4.69343416127421,6.77862626764225,3.74898276693435,1.97863503529776,6.29711264114032,6.6947346670253,7.75920236020387,6.89391778929257,5.53813589596716,3.52308073819968,7.34744787430767,8.87463532241857,5.74103034846106,9.04168593622517,7.51818252465638,10.7525741407066,56.9427740479415,47.0236879807491,51.8249901766589,7.63736494412091,9.80641580101519,8.3360981522008,5.40026704109006,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| |||
|short_description=p1@Gabpb1 | |||
}} |
Latest revision as of 16:05, 25 September 2015
Short description: | p1@Gabpb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabpb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3310 |
Association with transcript: | 0bp_to_ENSMUST00000103226, ENSMUST00000110424, NM_010249, NM_207669, uc008mdt.1, uc008mdu.1, uc008mdv.1, uc008mdx.1, uc008mdz.1, uc012cdi.1_5end |
EntrezGene: | Gabpb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.55e-07 | 13 |
common lymphoid progenitor | 1.55e-07 | 13 |
lymphoid lineage restricted progenitor cell | 3.31e-07 | 12 |
T cell | 5.72e-07 | 11 |
pro-T cell | 5.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.44e-10 | 41 |
respiratory system | 6.23e-10 | 42 |
anterior region of body | 7.88e-10 | 43 |
hemopoietic organ | 3.45e-09 | 29 |
immune organ | 3.45e-09 | 29 |
thymus | 1.03e-08 | 23 |
neck | 1.03e-08 | 23 |
respiratory system epithelium | 1.03e-08 | 23 |
hemolymphoid system gland | 1.03e-08 | 23 |
pharyngeal epithelium | 1.03e-08 | 23 |
thymic region | 1.03e-08 | 23 |
pharyngeal gland | 1.03e-08 | 23 |
entire pharyngeal arch endoderm | 1.03e-08 | 23 |
thymus primordium | 1.03e-08 | 23 |
early pharyngeal endoderm | 1.03e-08 | 23 |
craniocervical region | 1.85e-08 | 36 |
pharynx | 4.93e-08 | 24 |
upper respiratory tract | 4.93e-08 | 24 |
chordate pharynx | 4.93e-08 | 24 |
pharyngeal arch system | 4.93e-08 | 24 |
pharyngeal region of foregut | 4.93e-08 | 24 |
gland of gut | 6.31e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 9.65e-08 | 35 |
segment of respiratory tract | 1.75e-07 | 27 |
primordium | 2.42e-07 | 134 |
hemolymphoid system | 7.08e-07 | 48 |
immune system | 7.08e-07 | 48 |