FFCP PHASE1:Mm9::chr2:128255121..128255135,-: Difference between revisions
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{{FFCP|EntrezGene=100043424|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-34bp_to_NR_028589,NR_028590,NR_028591,uc008mgo.2,uc008mgp.2,uc012cdr.1_5end|description=CAGE_peak_2_at_Gm14005_5end|id=chr2:128255121..128255135,-|ontology_enrichment_celltype=CL:0000355!3.73e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,2.06e-13,9;CL:0000680,4.90e-09,6;CL:0000187,4.90e-09,6;CL:0000056,4.90e-09,6;CL:0000222,1.40e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000383!2.93e-07!10;UBERON:0001134!3.73e-07!9;UBERON:0002036!3.73e-07!9;UBERON:0002385!3.73e-07!9;UBERON:0000486!3.73e-07!9;UBERON:0001015!3.73e-07!9;UBERON:0004290!3.73e-07!9;UBERON:0003082!3.73e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.06e-13,9;UBERON:0002036,2.06e-13,9;UBERON:0002385,2.06e-13,9;UBERON:0000486,2.06e-13,9;UBERON:0007503,2.06e-13,9;UBERON:0001015,2.06e-13,9;UBERON:0002329,2.06e-13,9;UBERON:0003082,2.06e-13,9;UBERON:0003059,2.06e-13,9;UBERON:0007282,2.06e-13,9;UBERON:0004290,2.06e-13,9;UBERON:0009618,2.06e-13,9;UBERON:0000383,8.00e-12,10;UBERON:0007524,1.59e-10,11;UBERON:0003077,1.59e-10,11;UBERON:0007285,1.59e-10,11;UBERON:0004535,6.94e-07,23;UBERON:0001009,6.94e-07,23|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.516493293766305,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,2.46625541438102,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,12.1374172913703,17.9707129240474,16.7527598071615,15.2940186888064,23.9065919735456,17.9638830621527,2.26614272356039,2.12891555560981,2.0190142737785,3.9119567217402,1.74420125104357,0,0.58328969722285,0.979904951377538,0,0,0.725362142011344,0,8.7468208252222,4.87106847895886,9.28209766099396,0,0,1.90149421051854,2.37191172448392,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.630974884054146,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,0.255374676170375,0.46081959976873,0.263772575460388,0.640413505216868,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0.427115042397309,0.186399445825301,0.227178579999552,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0,0.983110940922263,9.03280709663706,6.23486411046885,3.5333957451034,0,2.56652954828636,2.54805239706646,0,0.649473123033642,0,0,0.45673551887624,0.776813650941515,0.29688427812965,0,0.304465478312141,0,0.904335843315735,0.23517741427141,0.125666591329675,0.247194967734374,0.433798070759735,0.884610551949874,1.45590164952668,0.662524555381181,1.45462575940567,0,0.292780797011547,0,0.766371165625774,2.15667224110656,2.39961092397363,2.03312363316904,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.305518091550949,1.36847667671102,0,0,0,0.459804208866946,0.900310649026746,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.556094498451196,0.348252166522167,1.64625709126355,0.199034266818493,2.1066395619397,2.83082697826187,7.10408748488982,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.590292695242212,0.462801338662135,0,0.268273401399619,1.05088808130453,1.15191894939436,1.31333971263276,1.21603214318784,1.31579988682799,2.19550115291051,1.47627060636409,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.969762435838129,0.0701358198903186,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,1.56106918286239,1.10344600874334,1.99318220683897,1.59454768657487,0.81931657357869,1.20879487306127,2.4590339958857,0,0,0.491764273019036,1.65562047782839,0,0.117211686592203,0.327869890753351,0.757412781613119,0.631016438832513,0.390438744296638,0,0.238968797952552,0,0.283076530788832,1.21443210502468,0.584511715822624,0.395287777946524,0,0.709700426041343,0,0.325773918707152,0.164970122972535,0,0,0,0.754420319023592,0.590603785761546,0,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.968786560175433,1.44751019827574,0.477489376012546,0,0,0.18542530201051,0.341741761595705,0.412773735926445,0.555583582109135,0.188368457004691,0.410082683163076,0.457556346413045,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100043424 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_NR_028589,NR_028590,NR_028591,uc008mgo.2,uc008mgp.2,uc012cdr.1_5end | |||
|cluster_id=chr2:128255121..128255135,- | |||
|description=CAGE_peak_2_at_Gm14005_5end | |||
|id=chr2:128255121..128255135,- | |||
|ontology_enrichment_celltype=CL:0000355!3.73e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.06e-13,9;CL:0000680,4.90e-09,6;CL:0000187,4.90e-09,6;CL:0000056,4.90e-09,6;CL:0000222,1.40e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000383!2.93e-07!10;UBERON:0001134!3.73e-07!9;UBERON:0002036!3.73e-07!9;UBERON:0002385!3.73e-07!9;UBERON:0000486!3.73e-07!9;UBERON:0001015!3.73e-07!9;UBERON:0004290!3.73e-07!9;UBERON:0003082!3.73e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.06e-13,9;UBERON:0002036,2.06e-13,9;UBERON:0002385,2.06e-13,9;UBERON:0000486,2.06e-13,9;UBERON:0007503,2.06e-13,9;UBERON:0001015,2.06e-13,9;UBERON:0002329,2.06e-13,9;UBERON:0003082,2.06e-13,9;UBERON:0003059,2.06e-13,9;UBERON:0007282,2.06e-13,9;UBERON:0004290,2.06e-13,9;UBERON:0009618,2.06e-13,9;UBERON:0000383,8.00e-12,10;UBERON:0007524,1.59e-10,11;UBERON:0003077,1.59e-10,11;UBERON:0007285,1.59e-10,11;UBERON:0004535,6.94e-07,23;UBERON:0001009,6.94e-07,23 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0.516493293766305,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,2.46625541438102,0.0992909512008853,0.783599367416806,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,12.1374172913703,17.9707129240474,16.7527598071615,15.2940186888064,23.9065919735456,17.9638830621527,2.26614272356039,2.12891555560981,2.0190142737785,3.9119567217402,1.74420125104357,0,0.58328969722285,0.979904951377538,0,0,0.725362142011344,0,8.7468208252222,4.87106847895886,9.28209766099396,0,0,1.90149421051854,2.37191172448392,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.630974884054146,0.285650984403804,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,0.255374676170375,0.46081959976873,0.263772575460388,0.640413505216868,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0.427115042397309,0.186399445825301,0.227178579999552,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0.649776417447669,0,0.983110940922263,9.03280709663706,6.23486411046885,3.5333957451034,0,2.56652954828636,2.54805239706646,0,0.649473123033642,0,0,0.45673551887624,0.776813650941515,0.29688427812965,0,0.304465478312141,0,0.904335843315735,0.23517741427141,0.125666591329675,0.247194967734374,0.433798070759735,0.884610551949874,1.45590164952668,0.662524555381181,1.45462575940567,0,0.292780797011547,0,0.766371165625774,2.15667224110656,2.39961092397363,2.03312363316904,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.305518091550949,1.36847667671102,0,0,0,0.459804208866946,0.900310649026746,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.556094498451196,0.348252166522167,1.64625709126355,0.199034266818493,2.1066395619397,2.83082697826187,7.10408748488982,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.590292695242212,0.462801338662135,0,0.268273401399619,1.05088808130453,1.15191894939436,1.31333971263276,1.21603214318784,1.31579988682799,2.19550115291051,1.47627060636409,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0.80673409849337,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.779856348476481,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.969762435838129,0.0701358198903186,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,1.17254380209271,0.476087281772027,1.56106918286239,1.10344600874334,1.99318220683897,1.59454768657487,0.81931657357869,1.20879487306127,2.4590339958857,0,0,0.491764273019036,1.65562047782839,0,0.117211686592203,0.327869890753351,0.757412781613119,0.631016438832513,0.390438744296638,0,0.238968797952552,0,0.283076530788832,1.21443210502468,0.584511715822624,0.395287777946524,0,0.709700426041343,0,0.325773918707152,0.164970122972535,0,0,0,0.754420319023592,0.590603785761546,0,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.968786560175433,1.44751019827574,0.477489376012546,0,0,0.18542530201051,0.341741761595705,0.412773735926445,0.555583582109135,0.188368457004691,0.410082683163076,0.457556346413045,1.18984900995699,2.09927178485487,1.38199973804424,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0,0.404593039154462,0.330613822901344,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.576060012515731,0.632022241256357,0.405450430580328,0.410843828659309,0.25984164595559,0,0.198681354781265,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,1.58711268530648,0,0.717710852875806,0,0.579568782096571,11.2609485270709,5.12824547948342,1.92931541171159,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,1.26348605881899,0.25347929989024,0.377252682772152,1.03005658216871,0.448176066834085,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,1.23625770240992,0.147198920134397,1.37147700954166,0.532427418478012,1.90748951957857,0.436039249896986,0.658765662907314,0.25384382367503,0.365855945745545,1.31534855718921,1.08643291076689,0,0.593175090620871,0.29551344712669,1.63692417267876,0.77468420592983,1.15743966588685,0.499621155875892,0,0.859484216193193,0.382576664137687,0.882365676478062,1.15933917810211 | |||
|short_description=p2@Gm14005 | |||
}} |
Latest revision as of 16:49, 25 September 2015
Short description: | p2@Gm14005 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm14005_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -34bp_to_NR_028589, NR_028590, NR_028591, uc008mgo.2, uc008mgp.2, uc012cdr.1_5end |
EntrezGene: | Gm14005 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.06e-13 | 9 |
muscle precursor cell | 4.90e-09 | 6 |
muscle cell | 4.90e-09 | 6 |
myoblast | 4.90e-09 | 6 |
mesodermal cell | 1.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.06e-13 | 9 |
striated muscle tissue | 2.06e-13 | 9 |
muscle tissue | 2.06e-13 | 9 |
multilaminar epithelium | 2.06e-13 | 9 |
epithelial vesicle | 2.06e-13 | 9 |
musculature | 2.06e-13 | 9 |
somite | 2.06e-13 | 9 |
myotome | 2.06e-13 | 9 |
presomitic mesoderm | 2.06e-13 | 9 |
presumptive segmental plate | 2.06e-13 | 9 |
dermomyotome | 2.06e-13 | 9 |
trunk paraxial mesoderm | 2.06e-13 | 9 |
musculature of body | 8.00e-12 | 10 |
dense mesenchyme tissue | 1.59e-10 | 11 |
paraxial mesoderm | 1.59e-10 | 11 |
presumptive paraxial mesoderm | 1.59e-10 | 11 |
cardiovascular system | 6.94e-07 | 23 |
circulatory system | 6.94e-07 | 23 |