FFCP PHASE1:Hg19::chr7:102937872..102937909,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9119 | |||
|TSSclassifier=strong | |||
|UniProt=E7ERZ4,G3V0E4,F8WBE1,F8WEC8,F8WEA6,F8WAZ6,B3KM34,O75439,Q96CP5 | |||
|association_with_transcript=0bp_to_ENST00000420236,ENST00000428154,ENST00000443722,ENST00000444457,ENST00000453466,ENST00000456433,ENST00000498530,NM_004279,uc003vbk.1,uc003vbl.2,uc003vbm.2,uc010liu.1,uc010liv.2,uc010liw.2,uc011kll.1_5end | |||
|cluster_id=chr7:102937872..102937909,+ | |||
|description=CAGE_peak_1_at_PMPCB_5end | |||
|id=chr7:102937872..102937909,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.48e-24!53;CL:0000051!1.48e-24!53;CL:0000838!5.82e-24!52;CL:0000945!7.94e-13!24;CL:0000826!7.94e-13!24;CL:0002087!9.61e-13!119;CL:0000037!9.08e-12!172;CL:0000566!9.08e-12!172;CL:0000738!2.05e-11!140;CL:0002031!2.80e-11!124;CL:0000084!2.91e-11!25;CL:0000827!2.91e-11!25;CL:0002032!1.76e-10!165;CL:0000837!1.76e-10!165;CL:0000988!2.20e-10!182;CL:0000791!2.60e-10!18;CL:0000789!2.60e-10!18;CL:0002420!2.60e-10!18;CL:0002419!2.60e-10!18;CL:0000790!2.60e-10!18;CL:0000236!8.85e-08!14;CL:0000625!9.97e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.19e-14;53!CL:0000945;7.67e-13;24!CL:0000084;2.97e-11;25!CL:0000791;2.59e-10;18!CL:0000789;2.59e-10;18!CL:0002419;2.59e-10;18!CL:0000236;1.35e-07;13!CL:0000625;9.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.48e-24,53;CL:0000051,1.48e-24,53;CL:0000838,5.82e-24,52;CL:0000945,7.94e-13,24;CL:0000826,7.94e-13,24;CL:0002087,2.62e-12,115;CL:0000037,2.49e-11,168;CL:0000084,2.91e-11,25;CL:0000827,2.91e-11,25;CL:0000738,5.55e-11,136;CL:0002031,7.51e-11,120;CL:0000988,2.15e-10,177;CL:0000791,2.60e-10,18;CL:0000789,2.60e-10,18;CL:0002420,2.60e-10,18;CL:0002419,2.60e-10,18;CL:0000790,2.60e-10,18;CL:0002032,4.64e-10,161;CL:0000837,4.64e-10,161;CL:0000236,8.85e-08,14;CL:0000625,9.97e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.19e-14;53!CL:0000790;2.59e-10;18 | |||
|ontology_enrichment_disease=DOID:162!2.40e-07!235;DOID:14566!4.40e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-07,235;DOID:14566,4.40e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=80.8468787753977,82.8569027458105,90.9155906419014,54.0395811106904,63.9154365031022,50.5956343978214,65.8579683237607,62.5402674692563,103.429508767136,27.030733015166,21.6318362071453,42.3776261932534,31.9158043656429,163.495352260222,109.361133990212,80.0066924277613,92.8149573156924,81.7947301233858,78.5571806052716,41.2455544557239,23.0520781106006,37.3011118558925,106.766023199884,86.3677622209899,72.563645685796,129.06224230829,121.837274743719,141.758117145936,68.0520198948604,160.056859006538,83.7555227139971,38.6156914281149,33.735062903164,58.4211336063525,307.544786303797,228.750295072261,150.029824500107,118.00102201729,110.499990556048,99.3909787878601,67.6224732204572,80.6495228387259,71.863583369938,63.9752250630085,74.8194368503843,72.7752183563449,73.680004699102,65.3756941954703,70.3033461931885,66.1692502340946,71.4688371216191,100.26846547276,90.3233683529941,100.695610639077,115.112513605191,74.5439664588715,74.5033789657919,93.2602460447101,68.2567079987113,86.6508373105453,93.9825574924591,70.5881782399572,63.4294431236789,77.5729045969503,82.1292145318893,80.0013166814507,85.9494703613893,64.570906970983,79.7868865182908,102.29594585611,85.9667293739384,115.639177700095,117.091083353127,110.064004168522,115.231530581054,115.731572320623,91.3231771221005,106.925947703152,89.2027006168795,78.3785045288434,108.608505750703,101.926597800666,146.076882902898,131.073266702912,148.548045395214,102.415253415962,134.5330516441,114.950487990897,148.074051503809,145.016170689375,160.518057288864,169.12431053883,170.111586515727,158.605594294831,205.706642614224,156.186762271621,179.792729884043,146.986025268188,113.697628946729,108.002476022378,180.560935715009,172.335001287443,171.447520998962,124.556890797624,158.497978221462,165.264285359381,154.629006209824,74.2929654408916,71.4025818103731,82.3833902064417,84.0104054068979,130.121585495039,178.537022047121,197.445131130208,130.669404756221,101.298552371624,127.61242436944,144.667154548187,162.438642276521,133.478908601797,147.144860571551,138.765998489463,130.398053121351,134.385941712139,153.664793659385,136.857251681442,137.949503482736,145.358461865032,126.231772409815,146.562296729393,102.398883851864,112.677744430211,99.2213479905795,112.4075763916,113.803705714347,118.484452509954,115.316462322409,52.5565659926847,116.466894746132,82.7050652535364,90.7333336209992,77.932549921139,40.4367770004722,45.9772709052692,58.418530857843,57.4628133087582,65.2823586147628,114.952480915175,125.838880371628,129.638667964018,43.9264920280418,48.173137325943,31.5897856462911,28.8307050381245,34.8184532054222,48.6958934233919,50.1587919688345,51.4249350746964,47.6726792000192,58.5761072338173,41.8942489793513,50.9382310831403,46.6158529917004,45.5902219628877,42.9375232377333,74.4759733889225,55.0096962934116,35.1347819107965,30.6633274931766,37.021360723157,37.1899540178727,94.8819005539655,89.1894607541148,41.4289349535408,63.1154378653055,85.6022258852559,86.9928317942848,78.0195608436773,69.1603345286796,64.4779240163653,40.5646183772879,53.2801904581065,97.0978430447271,69.510706787959,61.4616755706605,46.315372859349,84.1216849740798,65.6100009134631,92.0872226649445,71.8794495146006,88.3241702061144,84.3179700262232,72.5190790769229,70.2254033511242,113.305565046466,82.6674955508198,116.861458509791,71.2801714369232,69.729274056553,45.5080680969013,31.6191982399145,106.893432360832,85.9564231520394,86.7210681465493,66.2856207530065,69.5727296463775,64.0014130942102,85.7547304689759,87.5421422161646,92.2567919696211,97.9125383357176,86.7263267683923,94.2930642531716,91.9776727962896,86.7304550505209,100.421917683553,86.9138086037892,94.6626653415429,111.104227661255,123.982525580029,80.9421870937881,78.0828761264212,88.0019474091431,65.3221683691943,70.6412452330262,55.0664823146887,97.8229123159355,100.457564387686,101.43731212509,96.0937979992484,120.357045867675,102.193660541232,48.4993550222429,70.1132622630245,52.4912701139426,138.846010481562,118.388234993812,94.8820536319548,103.342415017876,109.901029626868,89.7792938041687,95.6490759565663,107.009049219105,95.3257348692362,110.276463400444,105.805468160257,19.1920418202409,9.81692416624121,27.1638847478724,47.0427876433734,171.119297009472,119.90492043467,129.382989563228,79.9048209940517,130.982687048416,92.6466175612038,66.837923813853,83.1772974106385,71.2750414398463,113.698610654674,73.6326770001334,35.3577826995057,70.7223575923839,122.422507653681,74.7893382282184,74.2043541491919,66.2069282984553,79.9067439385313,84.5518705816424,106.452284099764,63.7702045766359,74.4133563142776,59.3038337532026,91.8591573070414,82.8151892020378,99.6678933613977,108.903163606664,103.46568211097,65.5584381372511,119.224503570818,90.0735479955302,51.832028885193,57.2156215065337,49.7395187699937,97.1517782670186,56.1522985570668,60.9530725492244,39.3466625852222,65.7067678374237,94.3077201629901,101.468383583855,37.4517821713505,40.1083263326618,98.1266264284311,85.44860411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| |||
|short_description=p1@PMPCB | |||
}} |
Latest revision as of 19:34, 24 September 2015
Short description: | p1@PMPCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PMPCB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420236, ENST00000428154, ENST00000443722, ENST00000444457, ENST00000453466, ENST00000456433, ENST00000498530, NM_004279, uc003vbk.1, uc003vbl.2, uc003vbm.2, uc010liu.1, uc010liv.2, uc010liw.2, uc011kll.1_5end |
EntrezGene: | PMPCB |
HGNC: | 9119 |
UniProt: | E7ERZ4G3V0E4F8WBE1F8WEC8F8WEA6F8WAZ6B3KM34O75439Q96CP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.48e-24 | 53 |
common lymphoid progenitor | 1.48e-24 | 53 |
lymphoid lineage restricted progenitor cell | 5.82e-24 | 52 |
lymphocyte of B lineage | 7.94e-13 | 24 |
pro-B cell | 7.94e-13 | 24 |
nongranular leukocyte | 2.62e-12 | 115 |
hematopoietic stem cell | 2.49e-11 | 168 |
T cell | 2.91e-11 | 25 |
pro-T cell | 2.91e-11 | 25 |
leukocyte | 5.55e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.51e-11 | 120 |
hematopoietic cell | 2.15e-10 | 177 |
mature alpha-beta T cell | 2.60e-10 | 18 |
alpha-beta T cell | 2.60e-10 | 18 |
immature T cell | 2.60e-10 | 18 |
mature T cell | 2.60e-10 | 18 |
immature alpha-beta T cell | 2.60e-10 | 18 |
hematopoietic oligopotent progenitor cell | 4.64e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.64e-10 | 161 |
B cell | 8.85e-08 | 14 |
CD8-positive, alpha-beta T cell | 9.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-07 | 235 |
disease of cellular proliferation | 4.40e-07 | 239 |