FFCP PHASE1:Hg19::chr7:107880511..107880522,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000425651_5end | |||
|cluster_id=chr7:107880511..107880522,- | |||
|description=CAGE_peak_17_at_NRCAM_5end | |||
|id=chr7:107880511..107880522,- | |||
|ontology_enrichment_celltype=CL:0002605!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.59e-12;3!CL:0002579;2.59e-12;3!CL:0002592;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.31e-12,3;CL:0002605,2.89e-12,3;CL:0002579,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!5.28e-39!34;UBERON:0002791!2.96e-37!33;UBERON:0002020!2.96e-36!34;UBERON:0003528!2.96e-36!34;UBERON:0001869!5.16e-36!32;UBERON:0002780!1.85e-33!41;UBERON:0001890!1.85e-33!41;UBERON:0006240!1.85e-33!41;UBERON:0000956!3.97e-33!25;UBERON:0000203!3.97e-33!25;UBERON:0003080!1.76e-32!42;UBERON:0001049!3.82e-30!57;UBERON:0005068!3.82e-30!57;UBERON:0006241!3.82e-30!57;UBERON:0007135!3.82e-30!57;UBERON:0002619!1.64e-27!22;UBERON:0001950!3.07e-27!20;UBERON:0003056!8.80e-27!61;UBERON:0002616!1.21e-26!59;UBERON:0000955!3.63e-26!69;UBERON:0006238!3.63e-26!69;UBERON:0001017!1.45e-25!82;UBERON:0005743!6.61e-24!86;UBERON:0003075!6.66e-24!86;UBERON:0007284!6.66e-24!86;UBERON:0000073!2.46e-23!94;UBERON:0001016!2.46e-23!94;UBERON:0002346!2.23e-22!90;UBERON:0000153!3.07e-17!129;UBERON:0007811!3.07e-17!129;UBERON:0007023!1.01e-16!115;UBERON:0000033!1.76e-16!123;UBERON:0000025!1.67e-13!194;UBERON:0000200!2.24e-13!6;UBERON:0004121!4.93e-13!169;UBERON:0000924!1.80e-12!173;UBERON:0006601!1.80e-12!173;UBERON:0004111!7.57e-12!241;UBERON:0000477!2.57e-11!286;UBERON:0000475!1.29e-10!365;UBERON:0001871!1.02e-09!7;UBERON:0000483!9.32e-09!309;UBERON:0000119!1.53e-08!312;UBERON:0002021!7.71e-08!5;UBERON:0000064!7.77e-08!219;UBERON:0001872!1.67e-07!5;UBERON:0006947!1.76e-07!3;UBERON:0004054!1.76e-07!3;UBERON:0002771!2.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0003498;2.59e-12;3!UBERON:0005985;2.59e-12;3!UBERON:0001621;2.59e-12;3!UBERON:0000956;3.25e-12;25!UBERON:0000203;3.25e-12;25!UBERON:0002791;3.73e-10;32!UBERON:0001869;3.73e-10;32!UBERON:0001893;4.28e-09;34!UBERON:0002021;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0003528;3.50e-07;34!UBERON:0002020;3.50e-07;34!UBERON:0000200;7.17e-07;6!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6!UBERON:0002619;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0001621,2.31e-12,3;UBERON:0000956,3.13e-12,25;UBERON:0000203,3.13e-12,25;UBERON:0002791,8.51e-10,32;UBERON:0001869,8.51e-10,32;UBERON:0003528,2.81e-09,34;UBERON:0002020,2.81e-09,34;UBERON:0001893,2.81e-09,34;UBERON:0002021,5.73e-08,5;UBERON:0003498,6.13e-08,5;UBERON:0005985,6.13e-08,5;UBERON:0002780,7.58e-08,41;UBERON:0001890,7.58e-08,41;UBERON:0003080,7.58e-08,41;UBERON:0006240,7.58e-08,41;UBERON:0001950,2.44e-07,20;UBERON:0000200,7.17e-07,6;UBERON:0002619,8.87e-07,22;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,1.23186982565596,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.442317039724898,0,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,3.78281421196086,0.3755727921195,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,1.64093091392604,0.504143392443436,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.460409414939944,0,0,0,0.314231179832004,0,0,0.215927591218621,0,0,0.158013611732727,0.23248285073625,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p17@NRCAM | |||
}} |
Latest revision as of 02:32, 25 September 2015
Short description: | p17@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_NRCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000425651_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.31e-12 | 3 |
astrocyte of the cerebral cortex | 2.89e-12 | 3 |
omentum preadipocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.48e-18 | 2 |
coronary artery | 2.31e-12 | 3 |
cerebral cortex | 3.13e-12 | 25 |
pallium | 3.13e-12 | 25 |
regional part of telencephalon | 8.51e-10 | 32 |
cerebral hemisphere | 8.51e-10 | 32 |
brain grey matter | 2.81e-09 | 34 |
gray matter | 2.81e-09 | 34 |
telencephalon | 2.81e-09 | 34 |
occipital lobe | 5.73e-08 | 5 |
heart blood vessel | 6.13e-08 | 5 |
coronary vessel | 6.13e-08 | 5 |
regional part of forebrain | 7.58e-08 | 41 |
forebrain | 7.58e-08 | 41 |
anterior neural tube | 7.58e-08 | 41 |
future forebrain | 7.58e-08 | 41 |
neocortex | 2.44e-07 | 20 |
gyrus | 7.17e-07 | 6 |
regional part of cerebral cortex | 8.87e-07 | 22 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |