FFCP PHASE1:Hg19::chr7:156971838..156971846,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:156971838..156971846,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr7:156971838..156971846,+ | |||
|id=chr7:156971838..156971846,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.10e-34!42;CL:0000860!3.24e-34!45;CL:0002009!5.29e-25!65;CL:0000557!7.01e-25!71;CL:0002194!1.08e-24!63;CL:0000576!1.08e-24!63;CL:0000040!1.08e-24!63;CL:0000559!1.08e-24!63;CL:0000839!5.83e-24!70;CL:0000766!4.85e-22!76;CL:0000763!9.70e-14!112;CL:0000049!9.70e-14!112;CL:0000738!1.29e-10!140;CL:0002031!1.35e-10!124;CL:0002087!9.13e-10!119;CL:0000048!7.01e-09!430;CL:0000723!2.50e-08!436;CL:0000034!1.25e-07!444;CL:0000548!4.49e-07!679;CL:0000004!4.49e-07!679;CL:0000255!4.49e-07!679;CL:0002393!7.14e-07!9;CL:0002397!7.14e-07!9;CL:0000012!7.65e-07!682;CL:0002032!9.97e-07!165;CL:0000837!9.97e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-32;33!CL:0002057;3.46e-32;33!CL:0000473;1.16e-26;39!CL:0000234;1.16e-26;39!CL:0000576;2.70e-16;48!CL:0000766;7.16e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.93e-33,48;CL:0000234,5.93e-33,48;CL:0000860,1.16e-30,42;CL:0002057,1.16e-30,42;CL:0002009,4.08e-27,61;CL:0002194,2.18e-25,59;CL:0000576,2.18e-25,59;CL:0000040,2.18e-25,59;CL:0000559,2.18e-25,59;CL:0000557,2.84e-24,67;CL:0000839,3.15e-22,66;CL:0000766,5.26e-20,72;CL:0000763,9.51e-15,108;CL:0000049,9.51e-15,108;CL:0002031,1.84e-11,120;CL:0002087,7.55e-11,115;CL:0000738,1.08e-10,136;CL:0002032,2.80e-08,161;CL:0000837,2.80e-08,161;CL:0000037,9.76e-08,168;CL:0000134,1.05e-07,354;CL:0002320,2.08e-07,361;CL:0000988,4.19e-07,177;CL:0000219,4.79e-07,386;CL:0000048,6.32e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;9.95e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.44e-20!80;UBERON:0004765!7.35e-18!101;UBERON:0001434!7.35e-18!101;UBERON:0001474!1.20e-17!86;UBERON:0002204!3.80e-16!167;UBERON:0002390!3.65e-13!102;UBERON:0003061!3.65e-13!102;UBERON:0002193!4.13e-12!112;UBERON:0002405!1.59e-11!115;UBERON:0003081!7.48e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.66e-21,76;UBERON:0001474,5.70e-19,82;UBERON:0004765,1.17e-18,90;UBERON:0001434,2.71e-16,100;UBERON:0002405,3.65e-16,93;UBERON:0002390,4.26e-15,98;UBERON:0003061,4.26e-15,98;UBERON:0002193,2.93e-13,108;UBERON:0002204,8.94e-11,167;UBERON:0003081,9.08e-09,203;UBERON:0002384,5.23e-07,371 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0,3.65155045193687,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0.77408061658038,0,0.30120591877825,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,2.64513160582167,0.970336244751265,0.697287110717054,1.6446715520873,2.16794459626573,0.863077176966451,0.256160706529101,1.89185783910868,0.689491361473237,1.93645405075148,6.77132432971709,0.188242339542605,4.09359225086769,4.04502272001152,0.612167784741805,1.28371610830437,1.27867425159808,0.659702600373432,0.997318288108159,0,0.290209238628584,6.80862269629368,5.60540024096017,1.00499466102697,1.5644487552606,2.6062661364614,0,2.20966581592539,6.0127853613768,0.211255286311942,0.212604299965044,0.838634582033504,0.112328631146495,0.300353785683013,0.48217676009124,0,0.99458338599545,2.00930569141097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.668745981562712,0,0,0,0.668462741311041,0,0.221533894583621,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,2.1185468930115,0.860509862246441,0,0,0,0,0,0,0,0.302714855289863,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0,0.211931901159562,0,0.515262646192195,1.28820270022815,0.558350568994769,0.337552664482532,0.0974370051611986,0,0,1.45481451136931,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0.653638332277218,0,0.539325232640658,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0.587043471179108,0,0,0.570762456703795,0,0,0,0,0,0,1.17587489739202,0.850650583454319,0,0,0,0,0.088048434013226,0,0.288239906833923,0.25248486685276,0.507983154337352,0,0,0,0.102827492703324,0.300343057843917,2.5724378936752,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.07057393278297,1.10391690523754,0.35142424497814,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,3.6830873589135,0,0,0,0,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0.88424136911809,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0.732780747214898,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0,0,1.799791132412,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,1.79921244865442,0.155262956876259,0,0.265841714557995,1.5652351854352,0.150257608997218,2.28483127301277,0,0,0,3.24823631914946,0.796191777397232,0,2.40376993627955,0.336749488765919,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.265729680626726,0.490696182767533,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0.509781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p@chr7:156971838..156971846,+ | |||
}} |
Latest revision as of 07:59, 31 July 2015
Short description: | p@chr7:156971838..156971846, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:156971838..156971846, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.93e-33 | 48 |
phagocyte | 5.93e-33 | 48 |
classical monocyte | 1.16e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-30 | 42 |
macrophage dendritic cell progenitor | 4.08e-27 | 61 |
monopoietic cell | 2.18e-25 | 59 |
monocyte | 2.18e-25 | 59 |
monoblast | 2.18e-25 | 59 |
promonocyte | 2.18e-25 | 59 |
granulocyte monocyte progenitor cell | 2.84e-24 | 67 |
myeloid lineage restricted progenitor cell | 3.15e-22 | 66 |
myeloid leukocyte | 5.26e-20 | 72 |
myeloid cell | 9.51e-15 | 108 |
common myeloid progenitor | 9.51e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 1.84e-11 | 120 |
nongranular leukocyte | 7.55e-11 | 115 |
leukocyte | 1.08e-10 | 136 |
hematopoietic oligopotent progenitor cell | 2.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-08 | 161 |
hematopoietic stem cell | 9.76e-08 | 168 |
mesenchymal cell | 1.05e-07 | 354 |
connective tissue cell | 2.08e-07 | 361 |
hematopoietic cell | 4.19e-07 | 177 |
motile cell | 4.79e-07 | 386 |
multi fate stem cell | 6.32e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.66e-21 | 76 |
bone element | 5.70e-19 | 82 |
skeletal element | 1.17e-18 | 90 |
skeletal system | 2.71e-16 | 100 |
immune system | 3.65e-16 | 93 |
hematopoietic system | 4.26e-15 | 98 |
blood island | 4.26e-15 | 98 |
hemolymphoid system | 2.93e-13 | 108 |
musculoskeletal system | 8.94e-11 | 167 |
lateral plate mesoderm | 9.08e-09 | 203 |
connective tissue | 5.23e-07 | 371 |