FFCP PHASE1:Hg19::chr8:134114887..134114896,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=strong | |||
|UniProt=E5RHT2 | |||
|association_with_transcript=10bp_to_ENST00000519341_5end | |||
|cluster_id=chr8:134114887..134114896,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_15_at_SLA_5end | |||
|id=chr8:134114887..134114896,- | |||
|ontology_enrichment_celltype=CL:0000047!4.37e-37!8;CL:0000540!1.02e-18!6;CL:0000031!1.02e-18!6;CL:0000404!1.02e-18!6;CL:0002319!5.46e-11!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.68e-34;6!CL:0000404;5.68e-34;6!CL:0002319;1.44e-13;25!CL:0000047;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.82e-44,8;CL:0000540,6.01e-34,6;CL:0000031,6.01e-34,6;CL:0000404,6.01e-34,6;CL:0002319,1.49e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;5.68e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.56e-25!82;UBERON:0005743!2.70e-24!86;UBERON:0002619!3.04e-24!22;UBERON:0000073!7.04e-22!94;UBERON:0001016!7.04e-22!94;UBERON:0001869!1.08e-21!32;UBERON:0000956!2.17e-21!25;UBERON:0000203!2.17e-21!25;UBERON:0002791!4.94e-21!33;UBERON:0002020!2.07e-20!34;UBERON:0003528!2.07e-20!34;UBERON:0001893!2.07e-20!34;UBERON:0001950!1.11e-19!20;UBERON:0002780!7.03e-17!41;UBERON:0001890!7.03e-17!41;UBERON:0006240!7.03e-17!41;UBERON:0003080!1.81e-16!42;UBERON:0000924!4.46e-13!173;UBERON:0006601!4.46e-13!173;UBERON:0003112!5.38e-13!1;UBERON:0000032!5.38e-13!1;UBERON:0005253!5.38e-13!1;UBERON:0003128!5.38e-13!1;UBERON:0002241!5.38e-13!1;UBERON:0001703!5.38e-13!1;UBERON:0004761!5.38e-13!1;UBERON:0009617!5.38e-13!1;UBERON:0002022!7.68e-13!1;UBERON:0002581!9.73e-13!1;UBERON:0001882!1.09e-12!1;UBERON:0005403!1.09e-12!1;UBERON:0000955!3.21e-12!69;UBERON:0006238!3.21e-12!69;UBERON:0001049!5.35e-12!57;UBERON:0005068!5.35e-12!57;UBERON:0006241!5.35e-12!57;UBERON:0007135!5.35e-12!57;UBERON:0002616!1.43e-11!59;UBERON:0004121!1.55e-11!169;UBERON:0003056!3.61e-11!61;UBERON:0001872!2.71e-10!5;UBERON:0000349!3.59e-10!5;UBERON:0002346!2.81e-09!90;UBERON:0000033!4.87e-08!123;UBERON:0003075!1.04e-07!86;UBERON:0007284!1.04e-07!86;UBERON:0000153!1.31e-07!129;UBERON:0007811!1.31e-07!129;UBERON:0001954!3.70e-07!2;UBERON:0003022!3.70e-07!2;UBERON:0002421!3.70e-07!2;UBERON:0002600!3.70e-07!2;UBERON:0001871!9.38e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.80e-11;49!UBERON:0001950;4.04e-10;20!UBERON:0002619;2.70e-09;22!UBERON:0002114;1.40e-08;2!UBERON:0000956;2.72e-08;25!UBERON:0000203;2.72e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.16e-17,81;UBERON:0001016,3.72e-15,89;UBERON:0001950,3.92e-10,20;UBERON:0002619,2.63e-09,22;UBERON:0002114,1.40e-08,2;UBERON:0000956,2.65e-08,25;UBERON:0000203,2.65e-08,25;UBERON:0004121,6.83e-08,171;UBERON:0000924,6.83e-08,171;UBERON:0006601,6.83e-08,171;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,5.20559415430487,8.50617694055465,10.2184921853953,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81538247097931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,7.05800749420811,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56369770821863,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SLA | |||
}} |
Latest revision as of 15:31, 16 September 2015
Short description: | p15@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SLA_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 10bp_to_ENST00000519341_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | E5RHT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.82e-44 | 8 |
neuron | 6.01e-34 | 6 |
neuroblast | 6.01e-34 | 6 |
electrically signaling cell | 6.01e-34 | 6 |
neural cell | 1.49e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.16e-17 | 81 |
nervous system | 3.72e-15 | 89 |
neocortex | 3.92e-10 | 20 |
regional part of cerebral cortex | 2.63e-09 | 22 |
duodenum | 1.40e-08 | 2 |
cerebral cortex | 2.65e-08 | 25 |
pallium | 2.65e-08 | 25 |
ectoderm-derived structure | 6.83e-08 | 171 |
ectoderm | 6.83e-08 | 171 |
presumptive ectoderm | 6.83e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |