FFCP PHASE1:Mm9::chr5:110539286..110539317,+: Difference between revisions
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{{FFCP|EntrezGene=675812|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-37bp_to_ENSMUST00000144089,uc008ypt.2_5end|description=CAGE_peak_2_at_Zfp605_5end|id=chr5:110539286..110539317,+|ontology_enrichment_celltype=CL:0000540!6.18e-08!33;CL:0000047!6.18e-08!33;CL:0000031!6.18e-08!33;CL:0000404!6.18e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,5.78e-08,33;CL:0000047,5.78e-08,33;CL:0000031,5.78e-08,33;CL:0000404,5.78e-08,33;CL:0000117,9.05e-07,23;CL:0000337,9.05e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.25e-16!73;UBERON:0005743!3.25e-16!73;UBERON:0000153!3.87e-16!94;UBERON:0002346!6.36e-16!71;UBERON:0003075!6.36e-16!71;UBERON:0007284!6.36e-16!71;UBERON:0000073!7.79e-16!75;UBERON:0001016!7.79e-16!75;UBERON:0000033!2.63e-15!63;UBERON:0004121!4.33e-15!102;UBERON:0000924!4.33e-15!102;UBERON:0006601!4.33e-15!102;UBERON:0007811!1.47e-14!86;UBERON:0000955!2.69e-14!50;UBERON:0006238!2.69e-14!50;UBERON:0002616!1.17e-13!49;UBERON:0001049!3.57e-13!52;UBERON:0005068!3.57e-13!52;UBERON:0006241!3.57e-13!52;UBERON:0007135!3.57e-13!52;UBERON:0003056!5.45e-13!49;UBERON:0002020!4.90e-12!34;UBERON:0002791!1.09e-11!29;UBERON:0003528!1.09e-11!29;UBERON:0001893!1.09e-11!29;UBERON:0003080!1.00e-10!40;UBERON:0002780!2.90e-10!39;UBERON:0001890!2.90e-10!39;UBERON:0006240!2.90e-10!39;UBERON:0000956!1.06e-08!21;UBERON:0001869!1.06e-08!21;UBERON:0000203!1.06e-08!21;UBERON:0002021!9.66e-08!10;UBERON:0000411!9.66e-08!10;UBERON:0001950!9.66e-08!10;UBERON:0002619!2.29e-07!17;UBERON:0000468!9.62e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.37e-16,73;UBERON:0001016,4.94e-16,75;UBERON:0002346,5.08e-16,64;UBERON:0003075,5.08e-16,64;UBERON:0007284,5.08e-16,64;UBERON:0000073,1.08e-14,54;UBERON:0004121,8.90e-14,95;UBERON:0000924,8.90e-14,95;UBERON:0006601,8.90e-14,95;UBERON:0001049,1.47e-13,52;UBERON:0005068,1.47e-13,52;UBERON:0006241,1.47e-13,52;UBERON:0007135,1.47e-13,52;UBERON:0003056,2.65e-13,49;UBERON:0000955,2.80e-13,47;UBERON:0006238,2.80e-13,47;UBERON:0002616,1.25e-12,46;UBERON:0010371,1.35e-12,73;UBERON:0002020,2.42e-12,34;UBERON:0003528,3.20e-12,29;UBERON:0002791,3.20e-12,29;UBERON:0001893,3.20e-12,29;UBERON:0003080,3.66e-11,40;UBERON:0002780,1.12e-10,39;UBERON:0001890,1.12e-10,39;UBERON:0006240,1.12e-10,39;UBERON:0010314,1.62e-10,92;UBERON:0000956,4.53e-09,21;UBERON:0001869,4.53e-09,21;UBERON:0000203,4.53e-09,21;UBERON:0002021,4.38e-08,10;UBERON:0000411,4.38e-08,10;UBERON:0001950,4.38e-08,10;UBERON:0002619,1.16e-07,17|phase1_expression=2.24208385946712,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,1.80772652818207,0.703943610758334,0.70219357896598,1.36974374580404,1.51567102091139,1.02720437958723,1.13646523144697,0,0.404950534779652,0.699561878128147,2.36596624018678,0.411343300817216,1.69755860719212,3.06155844543851,1.48936426801328,0.261199789138935,0.799962113967033,0,0,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,0.443461021310609,1.27006134691926,1.23012957516914,0,0.288851619751275,0.831173226792462,0.204169356262369,0,1.5626706890476,0,0.588231488031014,0,0,1.1330713617802,1.31790010585369,2.0190142737785,1.56478268869608,0.436050312760893,0.659058548203415,0.388859798148567,0.979904951377538,1.43752564364972,1.17447824240415,0,1.00828139742739,0.514518872071894,0.573066879877513,0.515672092277442,2.42779753031517,2.64495489636016,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0,1.92109152660777,2.7996195323289,2.29510095163874,2.10324961351382,1.71390590642282,1.76694832761291,2.9397791811589,2.39613677545591,1.83843757322004,3.30347642998166,4.85211884723713,4.76180253094355,2.2420668914133,2.8361169516747,2.6045668527838,2.51264699101243,1.68828783009504,3.81995619442025,0.883885756421003,4.12877874317399,4.28718725398191,0.832988126665025,1.81371744256285,1.44932244350839,0.860423876981386,0,1.07940638327563,0,0,0.983110940922263,0.340860645156116,0,0,0.563373679106722,2.56652954828636,0,0,0,0.253359865475099,0,1.1418387971906,4.14300613835475,2.07818994690755,1.56136794089522,1.21786191324856,2.7673859670727,1.05505848386836,1.99900802130698,1.38233250462643,0.988779870937496,1.15679485535929,0.884610551949874,0.323533699894818,0.883366073841574,1.45462575940567,0,5.85561594023094,4.39838084308256,0.255457055208591,0.599075622529601,0,1.01656181658452,3.44518470631092,8.23501085073528,10.5549655774806,6.60532416730651,5.37002460393694,5.61027720310812,6.65189178577806,3.05518091550949,1.24406970610093,2.0217820674694,2.10441855886474,1.56144531555244,0.919608417733892,3.60124259610698,2.41127708537144,2.65342346690179,3.33095672740609,3.93547243150861,4.13925393182425,0.862271971731369,2.08016688184601,2.99116911078713,2.19195732427575,1.66828349535359,2.78601733217733,1.64625709126355,2.18937693500343,0.702213187313235,0.51469581422943,1.13665399758237,0.828503090142008,0.938104239924385,1.44049649168812,2.13070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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=675812 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_ENSMUST00000144089,uc008ypt.2_5end | |||
|cluster_id=chr5:110539286..110539317,+ | |||
|description=CAGE_peak_2_at_Zfp605_5end | |||
|id=chr5:110539286..110539317,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.18e-08!33;CL:0000047!6.18e-08!33;CL:0000031!6.18e-08!33;CL:0000404!6.18e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.78e-08,33;CL:0000047,5.78e-08,33;CL:0000031,5.78e-08,33;CL:0000404,5.78e-08,33;CL:0000117,9.05e-07,23;CL:0000337,9.05e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.25e-16!73;UBERON:0005743!3.25e-16!73;UBERON:0000153!3.87e-16!94;UBERON:0002346!6.36e-16!71;UBERON:0003075!6.36e-16!71;UBERON:0007284!6.36e-16!71;UBERON:0000073!7.79e-16!75;UBERON:0001016!7.79e-16!75;UBERON:0000033!2.63e-15!63;UBERON:0004121!4.33e-15!102;UBERON:0000924!4.33e-15!102;UBERON:0006601!4.33e-15!102;UBERON:0007811!1.47e-14!86;UBERON:0000955!2.69e-14!50;UBERON:0006238!2.69e-14!50;UBERON:0002616!1.17e-13!49;UBERON:0001049!3.57e-13!52;UBERON:0005068!3.57e-13!52;UBERON:0006241!3.57e-13!52;UBERON:0007135!3.57e-13!52;UBERON:0003056!5.45e-13!49;UBERON:0002020!4.90e-12!34;UBERON:0002791!1.09e-11!29;UBERON:0003528!1.09e-11!29;UBERON:0001893!1.09e-11!29;UBERON:0003080!1.00e-10!40;UBERON:0002780!2.90e-10!39;UBERON:0001890!2.90e-10!39;UBERON:0006240!2.90e-10!39;UBERON:0000956!1.06e-08!21;UBERON:0001869!1.06e-08!21;UBERON:0000203!1.06e-08!21;UBERON:0002021!9.66e-08!10;UBERON:0000411!9.66e-08!10;UBERON:0001950!9.66e-08!10;UBERON:0002619!2.29e-07!17;UBERON:0000468!9.62e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.37e-16,73;UBERON:0001016,4.94e-16,75;UBERON:0002346,5.08e-16,64;UBERON:0003075,5.08e-16,64;UBERON:0007284,5.08e-16,64;UBERON:0000073,1.08e-14,54;UBERON:0004121,8.90e-14,95;UBERON:0000924,8.90e-14,95;UBERON:0006601,8.90e-14,95;UBERON:0001049,1.47e-13,52;UBERON:0005068,1.47e-13,52;UBERON:0006241,1.47e-13,52;UBERON:0007135,1.47e-13,52;UBERON:0003056,2.65e-13,49;UBERON:0000955,2.80e-13,47;UBERON:0006238,2.80e-13,47;UBERON:0002616,1.25e-12,46;UBERON:0010371,1.35e-12,73;UBERON:0002020,2.42e-12,34;UBERON:0003528,3.20e-12,29;UBERON:0002791,3.20e-12,29;UBERON:0001893,3.20e-12,29;UBERON:0003080,3.66e-11,40;UBERON:0002780,1.12e-10,39;UBERON:0001890,1.12e-10,39;UBERON:0006240,1.12e-10,39;UBERON:0010314,1.62e-10,92;UBERON:0000956,4.53e-09,21;UBERON:0001869,4.53e-09,21;UBERON:0000203,4.53e-09,21;UBERON:0002021,4.38e-08,10;UBERON:0000411,4.38e-08,10;UBERON:0001950,4.38e-08,10;UBERON:0002619,1.16e-07,17 | |||
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| |||
|short_description=p2@Zfp605 | |||
}} |
Latest revision as of 14:58, 1 October 2015
Short description: | p2@Zfp605 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp605_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -37bp_to_ENSMUST00000144089, uc008ypt.2_5end |
EntrezGene: | Zfp605 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.78e-08 | 33 |
neuronal stem cell | 5.78e-08 | 33 |
neuroblast | 5.78e-08 | 33 |
electrically signaling cell | 5.78e-08 | 33 |
CNS neuron (sensu Vertebrata) | 9.05e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.05e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.37e-16 | 73 |
nervous system | 4.94e-16 | 75 |
neurectoderm | 5.08e-16 | 64 |
neural plate | 5.08e-16 | 64 |
presumptive neural plate | 5.08e-16 | 64 |
regional part of nervous system | 1.08e-14 | 54 |
ectoderm-derived structure | 8.90e-14 | 95 |
ectoderm | 8.90e-14 | 95 |
presumptive ectoderm | 8.90e-14 | 95 |
neural tube | 1.47e-13 | 52 |
neural rod | 1.47e-13 | 52 |
future spinal cord | 1.47e-13 | 52 |
neural keel | 1.47e-13 | 52 |
pre-chordal neural plate | 2.65e-13 | 49 |
brain | 2.80e-13 | 47 |
future brain | 2.80e-13 | 47 |
regional part of brain | 1.25e-12 | 46 |
ecto-epithelium | 1.35e-12 | 73 |
gray matter | 2.42e-12 | 34 |
brain grey matter | 3.20e-12 | 29 |
regional part of telencephalon | 3.20e-12 | 29 |
telencephalon | 3.20e-12 | 29 |
anterior neural tube | 3.66e-11 | 40 |
regional part of forebrain | 1.12e-10 | 39 |
forebrain | 1.12e-10 | 39 |
future forebrain | 1.12e-10 | 39 |
structure with developmental contribution from neural crest | 1.62e-10 | 92 |
cerebral cortex | 4.53e-09 | 21 |
cerebral hemisphere | 4.53e-09 | 21 |
pallium | 4.53e-09 | 21 |
occipital lobe | 4.38e-08 | 10 |
visual cortex | 4.38e-08 | 10 |
neocortex | 4.38e-08 | 10 |
regional part of cerebral cortex | 1.16e-07 | 17 |