FFCP PHASE1:Mm9::chr6:125095277..125095296,+: Difference between revisions
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{{FFCP|EntrezGene=320678|HGNC=|MCL_coexpression_id=1303|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141230_5end|description=CAGE_peak_3_at_Iffo1_5end|id=chr6:125095277..125095296,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.58e-14!73;UBERON:0005743!3.58e-14!73;UBERON:0000073!2.68e-13!75;UBERON:0001016!2.68e-13!75;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0002346!1.07e-09!71;UBERON:0003075!1.07e-09!71;UBERON:0007284!1.07e-09!71;UBERON:0001049!3.16e-08!52;UBERON:0005068!3.16e-08!52;UBERON:0006241!3.16e-08!52;UBERON:0007135!3.16e-08!52;UBERON:0000955!3.80e-08!50;UBERON:0006238!3.80e-08!50;UBERON:0000033!5.88e-08!63;UBERON:0002616!7.59e-08!49;UBERON:0002021!5.57e-07!10;UBERON:0000411!5.57e-07!10;UBERON:0001950!5.57e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-14,73;UBERON:0001016,2.73e-13,75;UBERON:0004121,1.50e-10,95;UBERON:0000924,1.50e-10,95;UBERON:0006601,1.50e-10,95;UBERON:0002346,1.75e-10,64;UBERON:0003075,1.75e-10,64;UBERON:0007284,1.75e-10,64;UBERON:0000073,5.86e-09,54;UBERON:0001049,3.19e-08,52;UBERON:0005068,3.19e-08,52;UBERON:0006241,3.19e-08,52;UBERON:0007135,3.19e-08,52;UBERON:0010314,3.82e-08,92;UBERON:0010371,1.03e-07,73;UBERON:0002021,4.70e-07,10;UBERON:0000411,4.70e-07,10;UBERON:0001950,4.70e-07,10;UBERON:0000955,5.81e-07,47;UBERON:0006238,5.81e-07,47|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.516493293766305,1.12630977721333,0.234064526321993,0.513653904676515,0.0797721589953364,0.513602189793617,0.262261207256992,0.999329285446988,0.809901069559304,4.89693314689703,1.41957974411207,1.37114433605739,1.27316895539409,4.93251082876205,3.77305614563364,4.96279599363977,0.47997726838022,0.22940928106717,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,1.67412652294763,1.5626706890476,0,1.17646297606203,1.36609096991689,0.485510353031154,2.26614272356039,2.02753862439029,2.56965453026354,3.9119567217402,4.57852828398938,1.97717564461025,3.11087838518853,3.07970127575798,4.31257693094915,1.00669563634642,2.17608642603403,0.336093799142464,3.08711323243136,3.15186783932632,3.09403255366465,1.61853168687678,4.7609188134483,1.90149421051854,5.76035704517525,1.77858959222228,0,3.9554654502679,2.1314403448383,4.79360176829448,6.14749288514487,1.24427534770173,1.35005938331691,0.420649922702764,10.2834354385369,6.62605622854841,0.61245399607477,0.383381884072945,2.75765635983006,9.91042928994498,8.93811366596314,8.1411462625809,1.84640802822271,1.9212405156506,1.56274011167028,8.09630697104005,6.75315132038016,4.43114918552749,5.30331453852602,5.55249555116501,2.05039390407831,0.530083353332288,1.5870027622425,1.15945795480671,0,0,0.539703191637817,0,1.34408066129201,0.983110940922263,1.87473354835864,1.55871602761721,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.91347103775248,3.6251303710604,2.82040064223167,2.4287945747259,3.34912026143355,0.922461989024234,1.20578112442098,3.52766121407114,1.50799909595611,1.23597483867187,1.87979163995885,1.76922110389975,7.60304194752823,3.3126227769059,1.93950101254089,0,7.31951992528868,7.54008144528438,1.02182822083437,1.91704199209472,2.39961092397363,2.28726408731516,8.08869452786043,8.6925114535539,3.01570445070875,11.9938780932671,14.0643501531682,15.584103341967,16.710850095979,1.93494791315601,1.8661045591514,0.252722758433675,1.47309299120532,2.99277018814219,2.5289231487682,4.68161537493908,4.21973489940002,6.05524842446818,6.14945857367279,4.68508622798644,7.76110112217047,1.72454394346274,6.99692496620931,5.80638709741031,8.98702502953057,6.39508673218875,8.00979983000983,3.08673204611915,1.99034266818493,0.702213187313235,3.08817488537658,2.27330799516474,1.65700618028402,0.938104239924385,2.16074473753218,2.3674473558521,2.55793501271625,1.23413690309903,1.86027155800326,3.48755421819505,3.26942958628075,1.31647879930784,2.46251196118643,3.24275238183423,2.33919979880532,2.63460138349261,2.41571553768669,11.565947171027,3.19004298375782,0,0,1.06644125267617,3.25131340604614,1.54640953586512,1.81515172161008,1.11189021922435,0.570676878337677,0,0.494096864172033,0.502670417600539,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,1.32767530667157,1.5994791765362,1.1270773567308,1.83286195060783,2.71533482034676,1.75339549725796,2.52946148497029,4.72352473534727,4.08196692387575,4.07210640941942,0.592905254174298,0.667380422864376,0.982794975566015,1.79889689907883,1.01430060694251,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,0.274561413188081,2.87536413054709,2.23284568601102,3.12037673114561,1.51547326768267,0.896987067609561,0.964887042726734,1.47802552133284,2.4633883530163,0.814824882210129,0.509235257325564,1.64283173801951,1.00503754465089,0.714130922658041,2.14647012643579,1.41871629695572,3.10050565508285,1.11618338060241,1.80249646187312,1.72684981865896,1.88043776155965,0,2.7195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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320678 | |||
|HGNC= | |||
|MCL_coexpression_id=1303 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141230_5end | |||
|cluster_id=chr6:125095277..125095296,+ | |||
|description=CAGE_peak_3_at_Iffo1_5end | |||
|id=chr6:125095277..125095296,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.58e-14!73;UBERON:0005743!3.58e-14!73;UBERON:0000073!2.68e-13!75;UBERON:0001016!2.68e-13!75;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0002346!1.07e-09!71;UBERON:0003075!1.07e-09!71;UBERON:0007284!1.07e-09!71;UBERON:0001049!3.16e-08!52;UBERON:0005068!3.16e-08!52;UBERON:0006241!3.16e-08!52;UBERON:0007135!3.16e-08!52;UBERON:0000955!3.80e-08!50;UBERON:0006238!3.80e-08!50;UBERON:0000033!5.88e-08!63;UBERON:0002616!7.59e-08!49;UBERON:0002021!5.57e-07!10;UBERON:0000411!5.57e-07!10;UBERON:0001950!5.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-14,73;UBERON:0001016,2.73e-13,75;UBERON:0004121,1.50e-10,95;UBERON:0000924,1.50e-10,95;UBERON:0006601,1.50e-10,95;UBERON:0002346,1.75e-10,64;UBERON:0003075,1.75e-10,64;UBERON:0007284,1.75e-10,64;UBERON:0000073,5.86e-09,54;UBERON:0001049,3.19e-08,52;UBERON:0005068,3.19e-08,52;UBERON:0006241,3.19e-08,52;UBERON:0007135,3.19e-08,52;UBERON:0010314,3.82e-08,92;UBERON:0010371,1.03e-07,73;UBERON:0002021,4.70e-07,10;UBERON:0000411,4.70e-07,10;UBERON:0001950,4.70e-07,10;UBERON:0000955,5.81e-07,47;UBERON:0006238,5.81e-07,47 | |||
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| |||
|short_description=p3@Iffo1 | |||
}} |
Latest revision as of 16:48, 26 September 2015
Short description: | p3@Iffo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Iffo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1303 |
Association with transcript: | 0bp_to_ENSMUST00000141230_5end |
EntrezGene: | Iffo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.13e-14 | 73 |
nervous system | 2.73e-13 | 75 |
ectoderm-derived structure | 1.50e-10 | 95 |
ectoderm | 1.50e-10 | 95 |
presumptive ectoderm | 1.50e-10 | 95 |
neurectoderm | 1.75e-10 | 64 |
neural plate | 1.75e-10 | 64 |
presumptive neural plate | 1.75e-10 | 64 |
regional part of nervous system | 5.86e-09 | 54 |
neural tube | 3.19e-08 | 52 |
neural rod | 3.19e-08 | 52 |
future spinal cord | 3.19e-08 | 52 |
neural keel | 3.19e-08 | 52 |
structure with developmental contribution from neural crest | 3.82e-08 | 92 |
ecto-epithelium | 1.03e-07 | 73 |
occipital lobe | 4.70e-07 | 10 |
visual cortex | 4.70e-07 | 10 |
neocortex | 4.70e-07 | 10 |
brain | 5.81e-07 | 47 |
future brain | 5.81e-07 | 47 |